RNA–Protein interactions for RNA: ENST00000550331.1

NEK3-201, Transcript of NIMA related kinase 3, humanhuman

TSL 2

Gene NEK3, Length 733 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3-201ENST00000550331 POLR2IP36954 125 aaKnown RBP6.06□□□□□ -1.44
NEK3-201ENST00000550331 GLIPR1P48060 266 aa6.06□□□□□ -1.44
NEK3-201ENST00000550331 PRRX1P54821 245 aa6.06□□□□□ -1.44
NEK3-201ENST00000550331 SNU13P55769 128 aaKnown RBP6.06□□□□□ -1.44
NEK3-201ENST00000550331 AESQ08117 197 aa6.06□□□□□ -1.44
NEK3-201ENST00000550331 EGFEM1PQ0D2K5 195 aa6.06□□□□□ -1.44
NEK3-201ENST00000550331 KPNB1Q14974 876 aaKnown RBP6.06□□□□□ -1.44
NEK3-201ENST00000550331 MLANAQ16655 118 aa6.06□□□□□ -1.44
NEK3-201ENST00000550331 TP53I3Q53FA7 332 aa6.06□□□□□ -1.44
NEK3-201ENST00000550331 DEFB121Q5J5C9 76 aa6.06□□□□□ -1.44
NEK3-201ENST00000550331 BAIAP2L2Q6UXY1 529 aa6.06□□□□□ -1.44
NEK3-201ENST00000550331 OR4D6Q8NGJ1 314 aa6.06□□□□□ -1.44
NEK3-201ENST00000550331 OR9G1Q8NH87 305 aa6.06□□□□□ -1.44
NEK3-201ENST00000550331 TRUB1Q8WWH5 349 aaKnown RBP6.06□□□□□ -1.44
NEK3-201ENST00000550331 FGGYQ96C11 551 aa6.06□□□□□ -1.44
NEK3-201ENST00000550331 RIBC2Q9H4K1 309 aa6.06□□□□□ -1.44
NEK3-201ENST00000550331 ZNF286AQ9HBT8 521 aa6.06□□□□□ -1.44
NEK3-201ENST00000550331 NEK6Q9HC98 313 aa6.06□□□□□ -1.44
NEK3-201ENST00000550331 MBNL3Q9NUK0 354 aaKnown RBP6.06□□□□□ -1.44
NEK3-201ENST00000550331 OR6C3Q9NZP0 311 aa6.06□□□□□ -1.44
NEK3-201ENST00000550331 GSTK1Q9Y2Q3 226 aa6.06□□□□□ -1.44
NEK3-201ENST00000550331 TMA7Q9Y2S6 64 aaKnown RBP6.06□□□□□ -1.44
NEK3-201ENST00000550331 MOB4Q9Y3A3 225 aa6.06□□□□□ -1.44
NEK3-201ENST00000550331 AP4S1Q9Y587 144 aa6.06□□□□□ -1.44
NEK3-201ENST00000550331 HSPE1-MOB4S4R3N1 261 aa6.06□□□□□ -1.44
NEK3-201ENST00000550331 KBTBD11-OT1A0A1B0GTJ5 212 aa6.05□□□□□ -1.44
NEK3-201ENST00000550331 DAPL1A0PJW8 107 aa6.05□□□□□ -1.44
NEK3-201ENST00000550331 FAM172BPA6NC97 362 aa6.05□□□□□ -1.44
NEK3-201ENST00000550331 J3QRE1 110 aa6.05□□□□□ -1.44
NEK3-201ENST00000550331 SLC33A1O00400 549 aaPredicted RBP6.05□□□□□ -1.44
NEK3-201ENST00000550331 RPSAP08865 295 aaKnown RBP6.05□□□□□ -1.44
NEK3-201ENST00000550331 DBTP11182 482 aaKnown RBP6.05□□□□□ -1.44
NEK3-201ENST00000550331 ZNF44P15621 663 aa6.05□□□□□ -1.44
NEK3-201ENST00000550331 SLC6A1P30531 599 aa6.05□□□□□ -1.44
NEK3-201ENST00000550331 GDNFP39905 211 aa6.05□□□□□ -1.44
NEK3-201ENST00000550331 NANOS3P60323 173 aaKnown RBP6.05□□□□□ -1.44
NEK3-201ENST00000550331 KHDC1LQ5JSQ8 128 aa6.05□□□□□ -1.44
NEK3-201ENST00000550331 KRBOX4Q5JUW0 171 aa6.05□□□□□ -1.44
NEK3-201ENST00000550331 SLC25A30Q5SVS4 291 aa6.05□□□□□ -1.44
NEK3-201ENST00000550331 MEDAGQ5VYS4 303 aa6.05□□□□□ -1.44
NEK3-201ENST00000550331 Q6P435 159 aa6.05□□□□□ -1.44
NEK3-201ENST00000550331 AMIGO2Q86SJ2 522 aa6.05□□□□□ -1.44
NEK3-201ENST00000550331 THNSL2Q86YJ6 484 aa6.05□□□□□ -1.44
NEK3-201ENST00000550331 LINC00482Q8N8I6 264 aa6.05□□□□□ -1.44
NEK3-201ENST00000550331 ZNF565Q8N9K5 539 aa6.05□□□□□ -1.44
NEK3-201ENST00000550331 OR51D1Q8NGF3 324 aa6.05□□□□□ -1.44
NEK3-201ENST00000550331 OR51T1Q8NGJ9 327 aa6.05□□□□□ -1.44
NEK3-201ENST00000550331 OR13C3Q8NGS6 347 aa6.05□□□□□ -1.44
NEK3-201ENST00000550331 BCAS4Q8TDM0 211 aa6.05□□□□□ -1.44
NEK3-201ENST00000550331 DPF1Q92782 380 aa6.05□□□□□ -1.44
NEK3-201ENST00000550331 RFT1Q96AA3 541 aa6.05□□□□□ -1.44
NEK3-201ENST00000550331 COQ2Q96H96 371 aa6.05□□□□□ -1.44
NEK3-201ENST00000550331 KIRREL1Q96J84 757 aa6.05□□□□□ -1.44
NEK3-201ENST00000550331 NCOR1P1Q9H4R4 102 aa6.05□□□□□ -1.44
NEK3-201ENST00000550331 INPP5EQ9NRR6 644 aa6.05□□□□□ -1.44
NEK3-201ENST00000550331 IMPAD1Q9NX62 359 aa6.05□□□□□ -1.44
NEK3-201ENST00000550331 OAZ3Q9UMX2 235 aa6.05□□□□□ -1.44
NEK3-201ENST00000550331 AMMECR1Q9Y4X0 333 aaPredicted RBP6.05□□□□□ -1.44
NEK3-201ENST00000550331 DNAH1Q9P2D7 4330 aa6.05□□□□□ -1.44
NEK3-201ENST00000550331 DNAH7Q8WXX0 4024 aa6.04□□□□□ -1.44
NEK3-201ENST00000550331 PSMB11A5LHX3 300 aa6.04□□□□□ -1.44
NEK3-201ENST00000550331 FAM90A18PA6NE21 464 aa6.04□□□□□ -1.44
NEK3-201ENST00000550331 FAM90A16PA6NEW6 464 aa6.04□□□□□ -1.44
NEK3-201ENST00000550331 FAM90A20PA6NIJ5 464 aa6.04□□□□□ -1.44
NEK3-201ENST00000550331 SNTNA6NMZ2 147 aa6.04□□□□□ -1.44
NEK3-201ENST00000550331 OR4C45A6NMZ5 311 aa6.04□□□□□ -1.44
NEK3-201ENST00000550331 FAM90A9PA6NNJ1 464 aa6.04□□□□□ -1.44
NEK3-201ENST00000550331 FAM90A12PA8MX19 464 aa6.04□□□□□ -1.44
NEK3-201ENST00000550331 FAM90A5PA8MXJ8 464 aa6.04□□□□□ -1.44
NEK3-201ENST00000550331 E9PQ18 207 aa6.04□□□□□ -1.44
NEK3-201ENST00000550331 DEGS1O15121 323 aa6.04□□□□□ -1.44
NEK3-201ENST00000550331 FGF16O43320 207 aa6.04□□□□□ -1.44
NEK3-201ENST00000550331 HTR1AP08908 422 aa6.04□□□□□ -1.44
NEK3-201ENST00000550331 FAM90A15PP0C7V4 464 aa6.04□□□□□ -1.44
NEK3-201ENST00000550331 FAM90A13PP0C7W8 464 aa6.04□□□□□ -1.44
NEK3-201ENST00000550331 FAM90A14PP0C7W9 464 aa6.04□□□□□ -1.44
NEK3-201ENST00000550331 FAM90A24PP0C7X0 464 aa6.04□□□□□ -1.44
NEK3-201ENST00000550331 CGB3P0DN86 165 aa6.04□□□□□ -1.44
NEK3-201ENST00000550331 CGB7P0DN87 165 aa6.04□□□□□ -1.44
NEK3-201ENST00000550331 OR3A4PP47883 348 aa6.04□□□□□ -1.44
NEK3-201ENST00000550331 MTNR1BP49286 362 aa6.04□□□□□ -1.44
NEK3-201ENST00000550331 RASSF2P50749 326 aa6.04□□□□□ -1.44
NEK3-201ENST00000550331 RAB7AP51149 207 aa6.04□□□□□ -1.44
NEK3-201ENST00000550331 KRTAP10-11P60412 298 aa6.04□□□□□ -1.44
NEK3-201ENST00000550331 ZP1P60852 638 aa6.04□□□□□ -1.44
NEK3-201ENST00000550331 PAX5Q02548 391 aa6.04□□□□□ -1.44
NEK3-201ENST00000550331 CD69Q07108 199 aa6.04□□□□□ -1.44
NEK3-201ENST00000550331 BNIP1Q12981 228 aa6.04□□□□□ -1.44
NEK3-201ENST00000550331 DCTN2Q13561 401 aaKnown RBP6.04□□□□□ -1.44
NEK3-201ENST00000550331 ALKBH1Q13686 389 aaKnown RBP6.04□□□□□ -1.44
NEK3-201ENST00000550331 RBM39Q14498 530 aaKnown RBP6.04□□□□□ -1.44
NEK3-201ENST00000550331 ATXN7L3Q14CW9 347 aaPredicted RBP6.04□□□□□ -1.44
NEK3-201ENST00000550331 CDK5R1Q15078 307 aa6.04□□□□□ -1.44
NEK3-201ENST00000550331 KISS1Q15726 138 aa6.04□□□□□ -1.44
NEK3-201ENST00000550331 C17orf58Q2M2W7 97 aa6.04□□□□□ -1.44
NEK3-201ENST00000550331 C9orf152Q5JTZ5 239 aa6.04□□□□□ -1.44
NEK3-201ENST00000550331 C1orf146Q5VVC0 180 aa6.04□□□□□ -1.44
NEK3-201ENST00000550331 ELP2Q6IA86 826 aa6.04□□□□□ -1.44
NEK3-201ENST00000550331 C10orf99Q6UWK7 81 aa6.04□□□□□ -1.44
NEK3-201ENST00000550331 SERPINA12Q8IW75 414 aa6.04□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms