RNA–Protein interactions for RNA: ENST00000548421.2

BRF1-213, Transcript of BRF1, RNA polymerase III transcription initiation factor subunit, humanhuman

TSL 1 (best) BASIC

Gene BRF1, Length 1,452 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRF1-213ENST00000548421 C12orf4Q9NQ89 552 aa23.98■■□□□ 1.43
BRF1-213ENST00000548421 A0A1B0GW55 424 aa23.97■■□□□ 1.43
BRF1-213ENST00000548421 TK1P04183 234 aa23.97■■□□□ 1.43
BRF1-213ENST00000548421 DUX4L2P0CJ85 424 aa23.97■■□□□ 1.43
BRF1-213ENST00000548421 DUX4L3P0CJ86 424 aa23.97■■□□□ 1.43
BRF1-213ENST00000548421 DUX4L4P0CJ87 422 aa23.97■■□□□ 1.43
BRF1-213ENST00000548421 DUX4L5P0CJ88 424 aa23.97■■□□□ 1.43
BRF1-213ENST00000548421 DUX4L6P0CJ89 424 aa23.97■■□□□ 1.43
BRF1-213ENST00000548421 DUX4L7P0CJ90 424 aa23.97■■□□□ 1.43
BRF1-213ENST00000548421 BAK1Q16611 211 aa23.97■■□□□ 1.43
BRF1-213ENST00000548421 DUX4L9Q6RFH8 374 aaPredicted RBP23.97■■□□□ 1.43
BRF1-213ENST00000548421 LYPD2Q6UXB3 125 aa23.97■■□□□ 1.43
BRF1-213ENST00000548421 SPICQ8N5J4 248 aa23.97■■□□□ 1.43
BRF1-213ENST00000548421 TMEM185AQ8NFB2 350 aa23.97■■□□□ 1.43
BRF1-213ENST00000548421 BORCS5Q969J3 196 aa23.97■■□□□ 1.43
BRF1-213ENST00000548421 HDHD3Q9BSH5 251 aaPredicted RBP23.97■■□□□ 1.43
BRF1-213ENST00000548421 DUX4Q9UBX2 424 aa23.97■■□□□ 1.43
BRF1-213ENST00000548421 SELLP14151 372 aa23.96■■□□□ 1.43
BRF1-213ENST00000548421 DEFB113Q30KQ7 82 aa23.96■■□□□ 1.43
BRF1-213ENST00000548421 CLEC2AQ6UVW9 174 aa23.96■■□□□ 1.43
BRF1-213ENST00000548421 OR5D13Q8NGL4 314 aa23.96■■□□□ 1.43
BRF1-213ENST00000548421 PLPPR1Q8TBJ4 325 aa23.96■■□□□ 1.43
BRF1-213ENST00000548421 NINJ1Q92982 152 aa23.96■■□□□ 1.43
BRF1-213ENST00000548421 MEIS3P1A6NDR6 274 aa23.95■■□□□ 1.42
BRF1-213ENST00000548421 CEACAM18A8MTB9 384 aa23.95■■□□□ 1.42
BRF1-213ENST00000548421 NDUFS8O00217 210 aa23.95■■□□□ 1.42
BRF1-213ENST00000548421 MGST3O14880 152 aa23.95■■□□□ 1.42
BRF1-213ENST00000548421 CBX5P45973 191 aa23.95■■□□□ 1.42
BRF1-213ENST00000548421 TRIQKQ629K1 86 aa23.95■■□□□ 1.42
BRF1-213ENST00000548421 ZNF497Q6ZNH5 498 aa23.95■■□□□ 1.42
BRF1-213ENST00000548421 FAM168AQ92567 244 aa23.95■■□□□ 1.42
BRF1-213ENST00000548421 TRIM63Q969Q1 353 aa23.95■■□□□ 1.42
BRF1-213ENST00000548421 RIMS4Q9H426 269 aaPredicted RBP23.95■■□□□ 1.42
BRF1-213ENST00000548421 CHMP1AQ9HD42 196 aaPredicted RBP23.95■■□□□ 1.42
BRF1-213ENST00000548421 MTFP1Q9UDX5 166 aa23.95■■□□□ 1.42
BRF1-213ENST00000548421 RBBP9O75884 186 aa23.94■■□□□ 1.42
BRF1-213ENST00000548421 NAPSAO96009 420 aa23.94■■□□□ 1.42
BRF1-213ENST00000548421 IL7P13232 177 aa23.94■■□□□ 1.42
BRF1-213ENST00000548421 PAX5Q02548 391 aa23.94■■□□□ 1.42
BRF1-213ENST00000548421 LRRC75A-AS1Q8N1F1 130 aa23.94■■□□□ 1.42
BRF1-213ENST00000548421 MBD6Q96DN6 1003 aa23.94■■□□□ 1.42
BRF1-213ENST00000548421 OCSTAMPQ9BR26 566 aa23.94■■□□□ 1.42
BRF1-213ENST00000548421 PIMREGQ9BSJ6 248 aa23.94■■□□□ 1.42
BRF1-213ENST00000548421 CTSZQ9UBR2 303 aa23.94■■□□□ 1.42
BRF1-213ENST00000548421 KLK11Q9UBX7 282 aa23.94■■□□□ 1.42
BRF1-213ENST00000548421 RBMX2Q9Y388 322 aaKnown RBP23.94■■□□□ 1.42
BRF1-213ENST00000548421 NAV2Q8IVL1 2488 aa23.94■■□□□ 1.42
BRF1-213ENST00000548421 H7C1Q1 480 aa23.94■■□□□ 1.42
BRF1-213ENST00000548421 UPK1BO75841 260 aa23.94■■□□□ 1.42
BRF1-213ENST00000548421 DTYMKP23919 212 aa23.94■■□□□ 1.42
BRF1-213ENST00000548421 ACTBP60709 375 aa23.94■■□□□ 1.42
BRF1-213ENST00000548421 ACTG1P63261 375 aa23.94■■□□□ 1.42
BRF1-213ENST00000548421 SSBP1Q04837 148 aaKnown RBP23.94■■□□□ 1.42
BRF1-213ENST00000548421 RSBN1Q5VWQ0 802 aaPredicted RBP23.94■■□□□ 1.42
BRF1-213ENST00000548421 GAPTQ8N292 157 aa23.94■■□□□ 1.42
BRF1-213ENST00000548421 LURAP1Q96LR2 239 aa23.94■■□□□ 1.42
BRF1-213ENST00000548421 BPESC1Q9GZL8 116 aa23.94■■□□□ 1.42
BRF1-213ENST00000548421 IFT46Q9NQC8 304 aa23.94■■□□□ 1.42
BRF1-213ENST00000548421 SLC25A10Q9UBX3 287 aaPredicted RBP23.94■■□□□ 1.42
BRF1-213ENST00000548421 MIOXQ9UGB7 285 aa23.94■■□□□ 1.42
BRF1-213ENST00000548421 TMEM30CPA0ZSE6 113 aa23.93■■□□□ 1.42
BRF1-213ENST00000548421 NDUFB3O43676 98 aa23.93■■□□□ 1.42
BRF1-213ENST00000548421 LANCL1O43813 399 aa23.93■■□□□ 1.42
BRF1-213ENST00000548421 ORC5O43913 435 aa23.93■■□□□ 1.42
BRF1-213ENST00000548421 RPS2P15880 293 aaKnown RBP23.93■■□□□ 1.42
BRF1-213ENST00000548421 GDNFP39905 211 aa23.93■■□□□ 1.42
BRF1-213ENST00000548421 DSCR9P59020 149 aa23.93■■□□□ 1.42
BRF1-213ENST00000548421 AESQ08117 197 aa23.93■■□□□ 1.42
BRF1-213ENST00000548421 LRRC10Q5BKY1 277 aa23.93■■□□□ 1.42
BRF1-213ENST00000548421 KRBOX4Q5JUW0 171 aa23.93■■□□□ 1.42
BRF1-213ENST00000548421 SLC35E4Q6ICL7 350 aa23.93■■□□□ 1.42
BRF1-213ENST00000548421 GDPD3Q7L5L3 318 aa23.93■■□□□ 1.42
BRF1-213ENST00000548421 MRPL30Q8TCC3 161 aaKnown RBP23.93■■□□□ 1.42
BRF1-213ENST00000548421 C10orf105Q8TEF2 133 aa23.93■■□□□ 1.42
BRF1-213ENST00000548421 COQ2Q96H96 371 aa23.93■■□□□ 1.42
BRF1-213ENST00000548421 ABCB10Q9NRK6 738 aa23.93■■□□□ 1.42
BRF1-213ENST00000548421 ING3Q9NXR8 418 aa23.93■■□□□ 1.42
BRF1-213ENST00000548421 FCGR3AP08637 254 aa23.92■■□□□ 1.42
BRF1-213ENST00000548421 EDDM3AQ14507 147 aa23.92■■□□□ 1.42
BRF1-213ENST00000548421 C16orf87Q6PH81 154 aa23.92■■□□□ 1.42
BRF1-213ENST00000548421 GVQW1Q8N7I0 195 aa23.92■■□□□ 1.42
BRF1-213ENST00000548421 PCDHB10Q9UN67 800 aa23.92■■□□□ 1.42
BRF1-213ENST00000548421 TRBV6-6A0A0A6YYG2 114 aa23.91■■□□□ 1.42
BRF1-213ENST00000548421 RCVRNP35243 200 aa23.91■■□□□ 1.42
BRF1-213ENST00000548421 NLRC3Q7RTR2 1065 aa23.91■■□□□ 1.42
BRF1-213ENST00000548421 ZNF230Q9UIE0 474 aaPredicted RBP23.91■■□□□ 1.42
BRF1-213ENST00000548421 ANAPC10Q9UM13 185 aa23.91■■□□□ 1.42
BRF1-213ENST00000548421 POM121CA8CG34 1229 aa23.9■■□□□ 1.42
BRF1-213ENST00000548421 DVL1O14640 695 aa23.9■■□□□ 1.42
BRF1-213ENST00000548421 MT-ND4P03905 459 aa23.9■■□□□ 1.42
BRF1-213ENST00000548421 INPP1P49441 399 aa23.9■■□□□ 1.42
BRF1-213ENST00000548421 OR8B3Q8NGG8 313 aa23.9■■□□□ 1.42
BRF1-213ENST00000548421 NEIL1Q96FI4 390 aaPredicted RBP23.9■■□□□ 1.42
BRF1-213ENST00000548421 OR8B2Q96RD0 313 aa23.9■■□□□ 1.42
BRF1-213ENST00000548421 ST6GALNAC5Q9BVH7 336 aa23.9■■□□□ 1.42
BRF1-213ENST00000548421 NARFLQ9H6Q4 476 aa23.9■■□□□ 1.42
BRF1-213ENST00000548421 PATZ1Q9HBE1 687 aaKnown RBP23.9■■□□□ 1.42
BRF1-213ENST00000548421 PALMDQ9NP74 551 aa23.9■■□□□ 1.42
BRF1-213ENST00000548421 KIF25Q9UIL4 384 aa23.9■■□□□ 1.42
BRF1-213ENST00000548421 DSCAML1Q8TD84 2053 aa23.9■■□□□ 1.42
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms