RNA–Protein interactions for RNA: ENST00000544223.6

HCFC2-202, Transcript of host cell factor C2, humanhuman

TSL 2

Gene HCFC2, Length 2,538 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC2-202ENST00000544223 ELMOD3Q96FG2 381 aa11.55□□□□□ -0.56
HCFC2-202ENST00000544223 HYLS1Q96M11 299 aa11.55□□□□□ -0.56
HCFC2-202ENST00000544223 OR2V2Q96R30 315 aa11.55□□□□□ -0.56
HCFC2-202ENST00000544223 PKIBQ9C010 78 aa11.55□□□□□ -0.56
HCFC2-202ENST00000544223 ZNF286AQ9HBT8 521 aa11.55□□□□□ -0.56
HCFC2-202ENST00000544223 DSCAMO60469 2012 aa11.55□□□□□ -0.56
HCFC2-202ENST00000544223 MYO18BQ8IUG5 2567 aa11.54□□□□□ -0.56
HCFC2-202ENST00000544223 RFPL4AA6NLU0 287 aa11.54□□□□□ -0.56
HCFC2-202ENST00000544223 RFPL4AL1F8VTS6 287 aa11.54□□□□□ -0.56
HCFC2-202ENST00000544223 J3QW42 95 aa11.54□□□□□ -0.56
HCFC2-202ENST00000544223 OR2A4O95047 310 aa11.54□□□□□ -0.56
HCFC2-202ENST00000544223 NAPSAO96009 420 aa11.54□□□□□ -0.56
HCFC2-202ENST00000544223 CXCL2P19875 107 aa11.54□□□□□ -0.56
HCFC2-202ENST00000544223 DTYMKP23919 212 aa11.54□□□□□ -0.56
HCFC2-202ENST00000544223 NKX6-1P78426 367 aaPredicted RBP11.54□□□□□ -0.56
HCFC2-202ENST00000544223 MBNL2Q5VZF2 373 aaKnown RBP11.54□□□□□ -0.56
HCFC2-202ENST00000544223 LDLRAD3Q86YD5 345 aa11.54□□□□□ -0.56
HCFC2-202ENST00000544223 LINC01560Q8TB33 94 aa11.54□□□□□ -0.56
HCFC2-202ENST00000544223 KIRREL1Q96J84 757 aa11.54□□□□□ -0.56
HCFC2-202ENST00000544223 OR2A7Q96R45 310 aa11.54□□□□□ -0.56
HCFC2-202ENST00000544223 PDCD10Q9BUL8 212 aa11.54□□□□□ -0.56
HCFC2-202ENST00000544223 PARP12Q9H0J9 701 aaKnown RBP11.54□□□□□ -0.56
HCFC2-202ENST00000544223 Q9N2K0 584 aa11.54□□□□□ -0.56
HCFC2-202ENST00000544223 TAAR3PQ9P1P4 343 aa11.54□□□□□ -0.56
HCFC2-202ENST00000544223 IGKV1D-13A0A0B4J2D9 117 aa11.54□□□□□ -0.56
HCFC2-202ENST00000544223 CCL21O00585 134 aa11.54□□□□□ -0.56
HCFC2-202ENST00000544223 TNFSF12O43508 249 aa11.54□□□□□ -0.56
HCFC2-202ENST00000544223 HOXB5P09067 269 aa11.54□□□□□ -0.56
HCFC2-202ENST00000544223 IGKV1-13P0DP09 117 aa11.54□□□□□ -0.56
HCFC2-202ENST00000544223 RPS2P15880 293 aaKnown RBP11.54□□□□□ -0.56
HCFC2-202ENST00000544223 PPP3CBP16298 524 aa11.54□□□□□ -0.56
HCFC2-202ENST00000544223 FPR2P25090 351 aa11.54□□□□□ -0.56
HCFC2-202ENST00000544223 AESQ08117 197 aa11.54□□□□□ -0.56
HCFC2-202ENST00000544223 ACTBL2Q562R1 376 aa11.54□□□□□ -0.56
HCFC2-202ENST00000544223 TMEM128Q5BJH2 165 aa11.54□□□□□ -0.56
HCFC2-202ENST00000544223 BEX5Q5H9J7 111 aa11.54□□□□□ -0.56
HCFC2-202ENST00000544223 PEG10Q86TG7 708 aaKnown RBP11.54□□□□□ -0.56
HCFC2-202ENST00000544223 MOGAT3Q86VF5 341 aa11.54□□□□□ -0.56
HCFC2-202ENST00000544223 DCTN5Q9BTE1 182 aa11.54□□□□□ -0.56
HCFC2-202ENST00000544223 RDH8Q9NYR8 311 aa11.54□□□□□ -0.56
HCFC2-202ENST00000544223 OR1A1Q9P1Q5 309 aa11.54□□□□□ -0.56
HCFC2-202ENST00000544223 SLC34A2O95436 690 aa11.53□□□□□ -0.56
HCFC2-202ENST00000544223 PMELP40967 661 aa11.53□□□□□ -0.56
HCFC2-202ENST00000544223 PIGPP57054 158 aa11.53□□□□□ -0.56
HCFC2-202ENST00000544223 KLF3P57682 345 aaPredicted RBP11.53□□□□□ -0.56
HCFC2-202ENST00000544223 KLRB1Q12918 225 aa11.53□□□□□ -0.56
HCFC2-202ENST00000544223 ARL6IP1Q15041 203 aa11.53□□□□□ -0.56
HCFC2-202ENST00000544223 EIF2S3LQ2VIR3 472 aaKnown RBP11.53□□□□□ -0.56
HCFC2-202ENST00000544223 TMEM211Q6ICI0 200 aa11.53□□□□□ -0.56
HCFC2-202ENST00000544223 ASCC1Q8N9N2 400 aaKnown RBP11.53□□□□□ -0.56
HCFC2-202ENST00000544223 LRRC29Q8WV35 223 aa11.53□□□□□ -0.56
HCFC2-202ENST00000544223 MITD1Q8WV92 249 aa11.53□□□□□ -0.56
HCFC2-202ENST00000544223 PLPPR2Q96GM1 343 aa11.53□□□□□ -0.56
HCFC2-202ENST00000544223 CXXC4Q9H2H0 198 aa11.53□□□□□ -0.56
HCFC2-202ENST00000544223 RANBP3Q9H6Z4 567 aaPredicted RBP11.53□□□□□ -0.56
HCFC2-202ENST00000544223 TMEM165Q9HC07 324 aa11.53□□□□□ -0.56
HCFC2-202ENST00000544223 MEMO1Q9Y316 297 aa11.53□□□□□ -0.56
HCFC2-202ENST00000544223 A0A1B0GW55 424 aa11.53□□□□□ -0.56
HCFC2-202ENST00000544223 C5orf51A6NDU8 294 aa11.53□□□□□ -0.56
HCFC2-202ENST00000544223 CA11O75493 328 aa11.53□□□□□ -0.56
HCFC2-202ENST00000544223 GIPP09681 153 aaPredicted RBP11.53□□□□□ -0.56
HCFC2-202ENST00000544223 DUX4L2P0CJ85 424 aa11.53□□□□□ -0.56
HCFC2-202ENST00000544223 DUX4L3P0CJ86 424 aa11.53□□□□□ -0.56
HCFC2-202ENST00000544223 DUX4L4P0CJ87 422 aa11.53□□□□□ -0.56
HCFC2-202ENST00000544223 DUX4L5P0CJ88 424 aa11.53□□□□□ -0.56
HCFC2-202ENST00000544223 DUX4L6P0CJ89 424 aa11.53□□□□□ -0.56
HCFC2-202ENST00000544223 DUX4L7P0CJ90 424 aa11.53□□□□□ -0.56
HCFC2-202ENST00000544223 SERPINF1P36955 418 aa11.53□□□□□ -0.56
HCFC2-202ENST00000544223 MPV17LQ2QL34 196 aa11.53□□□□□ -0.56
HCFC2-202ENST00000544223 NHLRC3Q5JS37 347 aa11.53□□□□□ -0.56
HCFC2-202ENST00000544223 DUX4L9Q6RFH8 374 aaPredicted RBP11.53□□□□□ -0.56
HCFC2-202ENST00000544223 SECTM1Q8WVN6 248 aa11.53□□□□□ -0.56
HCFC2-202ENST00000544223 ITLN1Q8WWA0 313 aa11.53□□□□□ -0.56
HCFC2-202ENST00000544223 PHB2Q99623 299 aa11.53□□□□□ -0.56
HCFC2-202ENST00000544223 DUX4Q9UBX2 424 aa11.53□□□□□ -0.56
HCFC2-202ENST00000544223 POLDIP2Q9Y2S7 368 aa11.53□□□□□ -0.56
HCFC2-202ENST00000544223 CELSR2Q9HCU4 2923 aa11.53□□□□□ -0.56
HCFC2-202ENST00000544223 TRAV14DV4A0A0A6YYC5 116 aa11.52□□□□□ -0.56
HCFC2-202ENST00000544223 HAND1O96004 215 aa11.52□□□□□ -0.56
HCFC2-202ENST00000544223 HOXD4P09016 255 aaPredicted RBP11.52□□□□□ -0.56
HCFC2-202ENST00000544223 ZNF728P0DKX0 622 aa11.52□□□□□ -0.56
HCFC2-202ENST00000544223 SELLP14151 372 aa11.52□□□□□ -0.56
HCFC2-202ENST00000544223 ZNF250P15622 560 aa11.52□□□□□ -0.56
HCFC2-202ENST00000544223 CCL8P80075 99 aa11.52□□□□□ -0.56
HCFC2-202ENST00000544223 OR5M8Q8NGP6 311 aa11.52□□□□□ -0.56
HCFC2-202ENST00000544223 DMRTA2Q96SC8 542 aa11.52□□□□□ -0.56
HCFC2-202ENST00000544223 CELSR1Q9NYQ6 3014 aa11.52□□□□□ -0.57
HCFC2-202ENST00000544223 TEX13DA0A0J9YY54 714 aaPredicted RBP11.52□□□□□ -0.57
HCFC2-202ENST00000544223 PLSCR5A0PG75 271 aa11.52□□□□□ -0.57
HCFC2-202ENST00000544223 MPC2O95563 127 aa11.52□□□□□ -0.57
HCFC2-202ENST00000544223 GLRXP35754 106 aa11.52□□□□□ -0.57
HCFC2-202ENST00000544223 GRK1Q15835 563 aa11.52□□□□□ -0.57
HCFC2-202ENST00000544223 DHRS11Q6UWP2 260 aa11.52□□□□□ -0.57
HCFC2-202ENST00000544223 FOXRED2Q8IWF2 684 aa11.52□□□□□ -0.57
HCFC2-202ENST00000544223 DEFB108BQ8NET1 73 aa11.52□□□□□ -0.57
HCFC2-202ENST00000544223 RBMXL1Q96E39 390 aaKnown RBP11.52□□□□□ -0.57
HCFC2-202ENST00000544223 OR10C1Q96KK4 312 aa11.52□□□□□ -0.57
HCFC2-202ENST00000544223 JKAMPQ9P055 326 aa11.52□□□□□ -0.57
HCFC2-202ENST00000544223 EDARQ9UNE0 448 aa11.52□□□□□ -0.57
HCFC2-202ENST00000544223 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP11.51□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 68.7 ms