RNA–Protein interactions for RNA: ENST00000540756.5

TTC3-225, Transcript of tetratricopeptide repeat domain 3, humanhuman

TSL 2 BASIC

Gene TTC3, Length 2,025 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC3-225ENST00000540756 IGHV3OR15-7A0A075B7D8 119 aa20.64■□□□□ 0.89
TTC3-225ENST00000540756 TPD52L2O43399 206 aaKnown RBP20.64■□□□□ 0.89
TTC3-225ENST00000540756 RCC1P18754 421 aaPredicted RBP20.64■□□□□ 0.89
TTC3-225ENST00000540756 C4orf46Q504U0 113 aa20.64■□□□□ 0.89
TTC3-225ENST00000540756 ZNF660Q6AZW8 331 aaPredicted RBP20.64■□□□□ 0.89
TTC3-225ENST00000540756 LRRC46Q96FV0 321 aa20.64■□□□□ 0.89
TTC3-225ENST00000540756 ZNF2Q9BSG1 426 aaPredicted RBP20.64■□□□□ 0.89
TTC3-225ENST00000540756 TMEM165Q9HC07 324 aa20.64■□□□□ 0.89
TTC3-225ENST00000540756 ZDHHC8Q9ULC8 765 aa20.64■□□□□ 0.89
TTC3-225ENST00000540756 SRRM5B3KS81 715 aa20.63■□□□□ 0.89
TTC3-225ENST00000540756 SCTP09683 121 aa20.63■□□□□ 0.89
TTC3-225ENST00000540756 NKX2-5P52952 324 aaPredicted RBP20.63■□□□□ 0.89
TTC3-225ENST00000540756 ZNF626Q68DY1 528 aa20.63■□□□□ 0.89
TTC3-225ENST00000540756 MUC20Q8N307 709 aaPredicted RBP20.63■□□□□ 0.89
TTC3-225ENST00000540756 CCDC107Q8WV48 283 aa20.63■□□□□ 0.89
TTC3-225ENST00000540756 DCAF16Q9NXF7 216 aa20.63■□□□□ 0.89
TTC3-225ENST00000540756 IL19Q9UHD0 177 aa20.63■□□□□ 0.89
TTC3-225ENST00000540756 DEFB108AA8MXU0 73 aa20.63■□□□□ 0.89
TTC3-225ENST00000540756 OR4E1P0C645 316 aa20.63■□□□□ 0.89
TTC3-225ENST00000540756 EIF2B2P49770 351 aaKnown RBP20.63■□□□□ 0.89
TTC3-225ENST00000540756 CD177Q8N6Q3 437 aa20.63■□□□□ 0.89
TTC3-225ENST00000540756 DSCAMO60469 2012 aa20.63■□□□□ 0.89
TTC3-225ENST00000540756 FLNCQ14315 2725 aa20.62■□□□□ 0.89
TTC3-225ENST00000540756 C17orf100A8MU93 164 aa20.62■□□□□ 0.89
TTC3-225ENST00000540756 GATA4P43694 442 aa20.62■□□□□ 0.89
TTC3-225ENST00000540756 RBM39Q14498 530 aaKnown RBP20.62■□□□□ 0.89
TTC3-225ENST00000540756 SMIM21Q3B7S5 101 aa20.62■□□□□ 0.89
TTC3-225ENST00000540756 MED30Q96HR3 178 aa20.62■□□□□ 0.89
TTC3-225ENST00000540756 C5orf66Q9H5L9 145 aa20.62■□□□□ 0.89
TTC3-225ENST00000540756 NECAP2Q9NVZ3 263 aa20.62■□□□□ 0.89
TTC3-225ENST00000540756 SMLR1H3BR10 107 aa20.61■□□□□ 0.89
TTC3-225ENST00000540756 LHBP01229 141 aa20.61■□□□□ 0.89
TTC3-225ENST00000540756 LOXP28300 417 aaPredicted RBP20.61■□□□□ 0.89
TTC3-225ENST00000540756 GRK1Q15835 563 aa20.61■□□□□ 0.89
TTC3-225ENST00000540756 MST1LQ2TV78 715 aa20.61■□□□□ 0.89
TTC3-225ENST00000540756 CD276Q5ZPR3 534 aa20.61■□□□□ 0.89
TTC3-225ENST00000540756 FIP1L1Q6UN15 594 aaKnown RBP20.61■□□□□ 0.89
TTC3-225ENST00000540756 ZDHHC22Q8N966 263 aa20.61■□□□□ 0.89
TTC3-225ENST00000540756 PIK3IP1Q96FE7 263 aa20.61■□□□□ 0.89
TTC3-225ENST00000540756 RNF115Q9Y4L5 304 aa20.61■□□□□ 0.89
TTC3-225ENST00000540756 CREBL2O60519 120 aaPredicted RBP20.61■□□□□ 0.89
TTC3-225ENST00000540756 KNG1P01042 644 aa20.61■□□□□ 0.89
TTC3-225ENST00000540756 GLAP06280 429 aa20.61■□□□□ 0.89
TTC3-225ENST00000540756 CFHR2P36980 270 aa20.61■□□□□ 0.89
TTC3-225ENST00000540756 BEX5Q5H9J7 111 aa20.61■□□□□ 0.89
TTC3-225ENST00000540756 TMEM17Q86X19 198 aa20.61■□□□□ 0.89
TTC3-225ENST00000540756 ALX4Q9H161 411 aaPredicted RBP20.61■□□□□ 0.89
TTC3-225ENST00000540756 CISD1Q9NZ45 108 aaKnown RBP20.61■□□□□ 0.89
TTC3-225ENST00000540756 RALYQ9UKM9 306 aaKnown RBP20.61■□□□□ 0.89
TTC3-225ENST00000540756 GPR132Q9UNW8 380 aa20.61■□□□□ 0.89
TTC3-225ENST00000540756 IGKV1D-17A0A075B6S4 117 aa20.6■□□□□ 0.89
TTC3-225ENST00000540756 H3BUI4 141 aa20.6■□□□□ 0.89
TTC3-225ENST00000540756 M0R233 179 aa20.6■□□□□ 0.89
TTC3-225ENST00000540756 CLDN14O95500 239 aa20.6■□□□□ 0.89
TTC3-225ENST00000540756 CYB5R3P00387 301 aaPredicted RBP20.6■□□□□ 0.89
TTC3-225ENST00000540756 SULT1A3P0DMM9 295 aa20.6■□□□□ 0.89
TTC3-225ENST00000540756 SULT1A4P0DMN0 295 aa20.6■□□□□ 0.89
TTC3-225ENST00000540756 PSG2P11465 335 aa20.6■□□□□ 0.89
TTC3-225ENST00000540756 AKR1C4P17516 323 aa20.6■□□□□ 0.89
TTC3-225ENST00000540756 COL10A1Q03692 680 aa20.6■□□□□ 0.89
TTC3-225ENST00000540756 HERPUD1Q15011 391 aa20.6■□□□□ 0.89
TTC3-225ENST00000540756 C2orf68Q2NKX9 166 aa20.6■□□□□ 0.89
TTC3-225ENST00000540756 SLC25A42Q86VD7 318 aa20.6■□□□□ 0.89
TTC3-225ENST00000540756 OR10Z1Q8NGY1 313 aa20.6■□□□□ 0.89
TTC3-225ENST00000540756 GPN1Q9HCN4 374 aaPredicted RBP20.6■□□□□ 0.89
TTC3-225ENST00000540756 IGKV1-6A0A0C4DH72 117 aa20.6■□□□□ 0.89
TTC3-225ENST00000540756 TNFSF4P23510 183 aa20.6■□□□□ 0.89
TTC3-225ENST00000540756 NFYAP23511 347 aaPredicted RBP20.6■□□□□ 0.89
TTC3-225ENST00000540756 LMO1P25800 156 aa20.6■□□□□ 0.89
TTC3-225ENST00000540756 PPP1R1AQ13522 171 aa20.6■□□□□ 0.89
TTC3-225ENST00000540756 ZNF497Q6ZNH5 498 aa20.6■□□□□ 0.89
TTC3-225ENST00000540756 RTBDNQ9BSG5 229 aaPredicted RBP20.6■□□□□ 0.89
TTC3-225ENST00000540756 ZNF222Q9UK12 451 aa20.6■□□□□ 0.89
TTC3-225ENST00000540756 WIPI2Q9Y4P8 454 aa20.6■□□□□ 0.89
TTC3-225ENST00000540756 CEACAM18A8MTB9 384 aa20.59■□□□□ 0.89
TTC3-225ENST00000540756 SNRPGP15A8MWD9 76 aa20.59■□□□□ 0.89
TTC3-225ENST00000540756 APOBEC3AP31941 199 aaPredicted RBP20.59■□□□□ 0.89
TTC3-225ENST00000540756 FCGR2CP31995 323 aa20.59■□□□□ 0.89
TTC3-225ENST00000540756 CD80P33681 288 aa20.59■□□□□ 0.89
TTC3-225ENST00000540756 DHRS2Q13268 280 aa20.59■□□□□ 0.89
TTC3-225ENST00000540756 DHRS11Q6UWP2 260 aa20.59■□□□□ 0.89
TTC3-225ENST00000540756 UXS1Q8NBZ7 420 aa20.59■□□□□ 0.89
TTC3-225ENST00000540756 DNAJB11Q9UBS4 358 aa20.59■□□□□ 0.89
TTC3-225ENST00000540756 Q6ZS49 121 aa20.58■□□□□ 0.89
TTC3-225ENST00000540756 UBALD1Q8TB05 177 aa20.58■□□□□ 0.89
TTC3-225ENST00000540756 TMEM230Q96A57 120 aa20.58■□□□□ 0.89
TTC3-225ENST00000540756 GLS2Q9UI32 602 aa20.58■□□□□ 0.89
TTC3-225ENST00000540756 TRDCB7Z8K6 153 aa20.58■□□□□ 0.88
TTC3-225ENST00000540756 BET1O15155 118 aa20.58■□□□□ 0.88
TTC3-225ENST00000540756 FABP7O15540 132 aa20.58■□□□□ 0.88
TTC3-225ENST00000540756 PRDX2P32119 198 aa20.58■□□□□ 0.88
TTC3-225ENST00000540756 SEC61A1P61619 476 aaKnown RBP20.58■□□□□ 0.88
TTC3-225ENST00000540756 AESQ08117 197 aa20.58■□□□□ 0.88
TTC3-225ENST00000540756 ZNF880Q6PDB4 577 aa20.58■□□□□ 0.88
TTC3-225ENST00000540756 PEG10Q86TG7 708 aaKnown RBP20.58■□□□□ 0.88
TTC3-225ENST00000540756 ZNF431Q8TF32 576 aaPredicted RBP20.58■□□□□ 0.88
TTC3-225ENST00000540756 RASL12Q9NYN1 266 aa20.58■□□□□ 0.88
TTC3-225ENST00000540756 SLC23A1Q9UHI7 598 aa20.58■□□□□ 0.88
TTC3-225ENST00000540756 PPP1R3CQ9UQK1 317 aa20.58■□□□□ 0.88
TTC3-225ENST00000540756 TRBV6-6A0A0A6YYG2 114 aa20.57■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms