RNA–Protein interactions for RNA: ENST00000539721.5

TRAF3-204, Transcript of TNF receptor associated factor 3, humanhuman

TSL 2 BASIC

Gene TRAF3, Length 1,786 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3-204ENST00000539721 ZMYND11Q15326 602 aa13.5□□□□□ -0.25
TRAF3-204ENST00000539721 GRK1Q15835 563 aa13.5□□□□□ -0.25
TRAF3-204ENST00000539721 ZNF788Q6ZQV5 615 aa13.5□□□□□ -0.25
TRAF3-204ENST00000539721 PEG10Q86TG7 708 aaKnown RBP13.5□□□□□ -0.25
TRAF3-204ENST00000539721 OR4C16Q8NGL9 310 aa13.5□□□□□ -0.25
TRAF3-204ENST00000539721 MRPL30Q8TCC3 161 aaKnown RBP13.5□□□□□ -0.25
TRAF3-204ENST00000539721 IGFBPL1Q8WX77 278 aa13.5□□□□□ -0.25
TRAF3-204ENST00000539721 DEDD2Q8WXF8 326 aa13.5□□□□□ -0.25
TRAF3-204ENST00000539721 SDSLQ96GA7 329 aa13.5□□□□□ -0.25
TRAF3-204ENST00000539721 PSMG3-AS1Q96PY0 264 aa13.5□□□□□ -0.25
TRAF3-204ENST00000539721 EDARQ9UNE0 448 aa13.5□□□□□ -0.25
TRAF3-204ENST00000539721 MAB21L2Q9Y586 359 aa13.5□□□□□ -0.25
TRAF3-204ENST00000539721 NAP1L6A6NFF2 107 aa13.49□□□□□ -0.25
TRAF3-204ENST00000539721 H7C1Q1 480 aa13.49□□□□□ -0.25
TRAF3-204ENST00000539721 NDUFS7O75251 213 aa13.49□□□□□ -0.25
TRAF3-204ENST00000539721 RAB3DO95716 219 aa13.49□□□□□ -0.25
TRAF3-204ENST00000539721 KCNJ8Q15842 424 aa13.49□□□□□ -0.25
TRAF3-204ENST00000539721 TRIM16LQ309B1 348 aa13.49□□□□□ -0.25
TRAF3-204ENST00000539721 FAAP20Q6NZ36 180 aa13.49□□□□□ -0.25
TRAF3-204ENST00000539721 ZNF497Q6ZNH5 498 aa13.49□□□□□ -0.25
TRAF3-204ENST00000539721 ZNRF1Q8ND25 227 aa13.49□□□□□ -0.25
TRAF3-204ENST00000539721 OR4K15Q8NH41 348 aa13.49□□□□□ -0.25
TRAF3-204ENST00000539721 SHARPINQ9H0F6 387 aa13.49□□□□□ -0.25
TRAF3-204ENST00000539721 ZNF286AQ9HBT8 521 aa13.49□□□□□ -0.25
TRAF3-204ENST00000539721 MCUBQ9NWR8 336 aa13.49□□□□□ -0.25
TRAF3-204ENST00000539721 M0QYG6 137 aa13.48□□□□□ -0.25
TRAF3-204ENST00000539721 SSX4O60224 188 aa13.48□□□□□ -0.25
TRAF3-204ENST00000539721 CD74P04233 296 aa13.48□□□□□ -0.25
TRAF3-204ENST00000539721 RFX2P48378 723 aa13.48□□□□□ -0.25
TRAF3-204ENST00000539721 IL13RA1P78552 427 aa13.48□□□□□ -0.25
TRAF3-204ENST00000539721 RNASE10Q5GAN6 216 aaKnown RBP13.48□□□□□ -0.25
TRAF3-204ENST00000539721 ATPAF1Q5TC12 328 aaPredicted RBP13.48□□□□□ -0.25
TRAF3-204ENST00000539721 RSBN1Q5VWQ0 802 aaPredicted RBP13.48□□□□□ -0.25
TRAF3-204ENST00000539721 Q6ZPA2 131 aa13.48□□□□□ -0.25
TRAF3-204ENST00000539721 GDPD3Q7L5L3 318 aa13.48□□□□□ -0.25
TRAF3-204ENST00000539721 NRARPQ7Z6K4 114 aa13.48□□□□□ -0.25
TRAF3-204ENST00000539721 FAM216BQ8N7L0 139 aa13.48□□□□□ -0.25
TRAF3-204ENST00000539721 TMEM185AQ8NFB2 350 aa13.48□□□□□ -0.25
TRAF3-204ENST00000539721 ENKURQ8TC29 256 aa13.48□□□□□ -0.25
TRAF3-204ENST00000539721 DNTTIP1Q9H147 329 aa13.48□□□□□ -0.25
TRAF3-204ENST00000539721 Q9N2K0 584 aa13.48□□□□□ -0.25
TRAF3-204ENST00000539721 DCHS2Q6V1P9 2916 aa13.48□□□□□ -0.25
TRAF3-204ENST00000539721 IGKV1D-8A0A087WSZ0 117 aa13.48□□□□□ -0.25
TRAF3-204ENST00000539721 TRBV6-6A0A0A6YYG2 114 aa13.48□□□□□ -0.25
TRAF3-204ENST00000539721 A0A1B0GW55 424 aa13.48□□□□□ -0.25
TRAF3-204ENST00000539721 TMEM30CPA0ZSE6 113 aa13.48□□□□□ -0.25
TRAF3-204ENST00000539721 K7N7A8 449 aa13.48□□□□□ -0.25
TRAF3-204ENST00000539721 MGST3O14880 152 aa13.48□□□□□ -0.25
TRAF3-204ENST00000539721 SIGLEC5O15389 551 aa13.48□□□□□ -0.25
TRAF3-204ENST00000539721 TMPRSS2O15393 492 aa13.48□□□□□ -0.25
TRAF3-204ENST00000539721 PMP2P02689 132 aa13.48□□□□□ -0.25
TRAF3-204ENST00000539721 TK1P04183 234 aa13.48□□□□□ -0.25
TRAF3-204ENST00000539721 CSN2P05814 226 aa13.48□□□□□ -0.25
TRAF3-204ENST00000539721 DUX4L2P0CJ85 424 aa13.48□□□□□ -0.25
TRAF3-204ENST00000539721 DUX4L3P0CJ86 424 aa13.48□□□□□ -0.25
TRAF3-204ENST00000539721 DUX4L4P0CJ87 422 aa13.48□□□□□ -0.25
TRAF3-204ENST00000539721 DUX4L5P0CJ88 424 aa13.48□□□□□ -0.25
TRAF3-204ENST00000539721 DUX4L6P0CJ89 424 aa13.48□□□□□ -0.25
TRAF3-204ENST00000539721 DUX4L7P0CJ90 424 aa13.48□□□□□ -0.25
TRAF3-204ENST00000539721 SELLP14151 372 aa13.48□□□□□ -0.25
TRAF3-204ENST00000539721 TBPP20226 339 aa13.48□□□□□ -0.25
TRAF3-204ENST00000539721 HRH1P35367 487 aa13.48□□□□□ -0.25
TRAF3-204ENST00000539721 TAS2R46P59540 309 aa13.48□□□□□ -0.25
TRAF3-204ENST00000539721 ARPC4P59998 168 aa13.48□□□□□ -0.25
TRAF3-204ENST00000539721 AESQ08117 197 aa13.48□□□□□ -0.25
TRAF3-204ENST00000539721 EDDM3AQ14507 147 aa13.48□□□□□ -0.25
TRAF3-204ENST00000539721 CARTPTQ16568 116 aa13.48□□□□□ -0.25
TRAF3-204ENST00000539721 CHRFAM7AQ494W8 412 aa13.48□□□□□ -0.25
TRAF3-204ENST00000539721 ACTBL2Q562R1 376 aa13.48□□□□□ -0.25
TRAF3-204ENST00000539721 KRBOX4Q5JUW0 171 aa13.48□□□□□ -0.25
TRAF3-204ENST00000539721 AVPI1Q5T686 147 aa13.48□□□□□ -0.25
TRAF3-204ENST00000539721 SLC35E4Q6ICL7 350 aa13.48□□□□□ -0.25
TRAF3-204ENST00000539721 DUX4L9Q6RFH8 374 aaPredicted RBP13.48□□□□□ -0.25
TRAF3-204ENST00000539721 CENPSQ8N2Z9 138 aa13.48□□□□□ -0.25
TRAF3-204ENST00000539721 OR4D10Q8NGI6 311 aa13.48□□□□□ -0.25
TRAF3-204ENST00000539721 OR5H2Q8NGV7 314 aa13.48□□□□□ -0.25
TRAF3-204ENST00000539721 CHPT1Q8WUD6 406 aa13.48□□□□□ -0.25
TRAF3-204ENST00000539721 CCDC107Q8WV48 283 aa13.48□□□□□ -0.25
TRAF3-204ENST00000539721 TIMD4Q96H15 378 aa13.48□□□□□ -0.25
TRAF3-204ENST00000539721 COQ2Q96H96 371 aa13.48□□□□□ -0.25
TRAF3-204ENST00000539721 MED30Q96HR3 178 aa13.48□□□□□ -0.25
TRAF3-204ENST00000539721 TMEM246Q9BRR3 403 aa13.48□□□□□ -0.25
TRAF3-204ENST00000539721 TINAGL1Q9GZM7 467 aaPredicted RBP13.48□□□□□ -0.25
TRAF3-204ENST00000539721 CHODLQ9H9P2 273 aa13.48□□□□□ -0.25
TRAF3-204ENST00000539721 DUX4Q9UBX2 424 aa13.48□□□□□ -0.25
TRAF3-204ENST00000539721 ANXA10Q9UJ72 324 aa13.48□□□□□ -0.25
TRAF3-204ENST00000539721 TRAPPC2LQ9UL33 140 aa13.48□□□□□ -0.25
TRAF3-204ENST00000539721 USP9YO00507 2555 aaPredicted RBP13.47□□□□□ -0.25
TRAF3-204ENST00000539721 FAM240BA0A1B0GVZ2 78 aa13.47□□□□□ -0.25
TRAF3-204ENST00000539721 VGLL3A8MV65 326 aa13.47□□□□□ -0.25
TRAF3-204ENST00000539721 PPIHO43447 177 aaKnown RBP13.47□□□□□ -0.25
TRAF3-204ENST00000539721 ADAM20O43506 726 aa13.47□□□□□ -0.25
TRAF3-204ENST00000539721 IGHV2-70P01814 119 aa13.47□□□□□ -0.25
TRAF3-204ENST00000539721 SSTR2P30874 369 aa13.47□□□□□ -0.25
TRAF3-204ENST00000539721 BTCP35070 178 aa13.47□□□□□ -0.25
TRAF3-204ENST00000539721 MEF2DQ14814 521 aa13.47□□□□□ -0.25
TRAF3-204ENST00000539721 OXA1LQ15070 435 aa13.47□□□□□ -0.25
TRAF3-204ENST00000539721 ZNF782Q6ZMW2 699 aaPredicted RBP13.47□□□□□ -0.25
TRAF3-204ENST00000539721 SLC36A1Q7Z2H8 476 aa13.47□□□□□ -0.25
TRAF3-204ENST00000539721 GAPTQ8N292 157 aa13.47□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 44.3 ms