RNA–Protein interactions for RNA: ENST00000538545.6

ACTN1-205, Transcript of actinin alpha 1, humanhuman

TSL 1 (best) BASIC

Gene ACTN1, Length 2,813 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-205ENST00000538545 GSKIPQ9P0R6 139 aa11.94□□□□□ -0.5
ACTN1-205ENST00000538545 C14orf166Q9Y224 244 aaKnown RBP11.94□□□□□ -0.5
ACTN1-205ENST00000538545 USF3Q68DE3 2245 aa11.94□□□□□ -0.5
ACTN1-205ENST00000538545 HIVEP3Q5T1R4 2406 aa11.94□□□□□ -0.5
ACTN1-205ENST00000538545 ERVH48-1M5A8F1 160 aa11.94□□□□□ -0.5
ACTN1-205ENST00000538545 TNFSF12O43508 249 aa11.94□□□□□ -0.5
ACTN1-205ENST00000538545 SPRY3O43610 288 aa11.94□□□□□ -0.5
ACTN1-205ENST00000538545 PGA5P0DJD9 388 aa11.94□□□□□ -0.5
ACTN1-205ENST00000538545 ZNF728P0DKX0 622 aa11.94□□□□□ -0.5
ACTN1-205ENST00000538545 ERVK11-1P61568 191 aa11.94□□□□□ -0.5
ACTN1-205ENST00000538545 MPV17LQ2QL34 196 aa11.94□□□□□ -0.5
ACTN1-205ENST00000538545 C6orf183Q5T699 404 aa11.94□□□□□ -0.5
ACTN1-205ENST00000538545 TEX261Q6UWH6 196 aa11.94□□□□□ -0.5
ACTN1-205ENST00000538545 TGIF2LYQ8IUE0 185 aa11.94□□□□□ -0.5
ACTN1-205ENST00000538545 KIRREL1Q96J84 757 aa11.94□□□□□ -0.5
ACTN1-205ENST00000538545 BCL2L14Q9BZR8 327 aa11.94□□□□□ -0.5
ACTN1-205ENST00000538545 METTL8Q9H825 291 aaKnown RBP11.94□□□□□ -0.5
ACTN1-205ENST00000538545 U3KQ87 197 aa11.94□□□□□ -0.5
ACTN1-205ENST00000538545 DBX1A6NMT0 343 aa11.93□□□□□ -0.5
ACTN1-205ENST00000538545 SLC33A1O00400 549 aaPredicted RBP11.93□□□□□ -0.5
ACTN1-205ENST00000538545 PTBP3O95758 552 aaKnown RBP11.93□□□□□ -0.5
ACTN1-205ENST00000538545 CRYAAP02489 173 aa11.93□□□□□ -0.5
ACTN1-205ENST00000538545 OR5AC1P0C628 307 aa11.93□□□□□ -0.5
ACTN1-205ENST00000538545 DHRS11Q6UWP2 260 aa11.93□□□□□ -0.5
ACTN1-205ENST00000538545 WDR82Q6UXN9 313 aa11.93□□□□□ -0.5
ACTN1-205ENST00000538545 ZNF680Q8NEM1 530 aa11.93□□□□□ -0.5
ACTN1-205ENST00000538545 PARP12Q9H0J9 701 aaKnown RBP11.93□□□□□ -0.5
ACTN1-205ENST00000538545 AMDHD2Q9Y303 409 aa11.93□□□□□ -0.5
ACTN1-205ENST00000538545 TRGV8A0A0C4DH27 118 aa11.93□□□□□ -0.5
ACTN1-205ENST00000538545 M0R233 179 aa11.93□□□□□ -0.5
ACTN1-205ENST00000538545 PPYP01298 95 aa11.93□□□□□ -0.5
ACTN1-205ENST00000538545 CRHP06850 196 aa11.93□□□□□ -0.5
ACTN1-205ENST00000538545 EXOSC2Q13868 293 aaKnown RBP11.93□□□□□ -0.5
ACTN1-205ENST00000538545 NHLRC3Q5JS37 347 aa11.93□□□□□ -0.5
ACTN1-205ENST00000538545 OR8H3Q8N146 312 aa11.93□□□□□ -0.5
ACTN1-205ENST00000538545 OR1A1Q9P1Q5 309 aa11.93□□□□□ -0.5
ACTN1-205ENST00000538545 RALYQ9UKM9 306 aaKnown RBP11.93□□□□□ -0.5
ACTN1-205ENST00000538545 AKAP6Q13023 2319 aa11.93□□□□□ -0.5
ACTN1-205ENST00000538545 ANKHD1Q8IWZ3 2542 aaKnown RBP11.93□□□□□ -0.5
ACTN1-205ENST00000538545 IGHV3OR15-7A0A075B7D8 119 aa11.92□□□□□ -0.5
ACTN1-205ENST00000538545 J3QW42 95 aa11.92□□□□□ -0.5
ACTN1-205ENST00000538545 EGR1P18146 543 aa11.92□□□□□ -0.5
ACTN1-205ENST00000538545 FAHD2BQ6P2I3 314 aaPredicted RBP11.92□□□□□ -0.5
ACTN1-205ENST00000538545 ZNF546Q86UE3 836 aa11.92□□□□□ -0.5
ACTN1-205ENST00000538545 RTN4IP1Q8WWV3 396 aaPredicted RBP11.92□□□□□ -0.5
ACTN1-205ENST00000538545 FAHD2AQ96GK7 314 aa11.92□□□□□ -0.5
ACTN1-205ENST00000538545 BOD1Q96IK1 185 aa11.92□□□□□ -0.5
ACTN1-205ENST00000538545 MFFQ9GZY8 342 aa11.92□□□□□ -0.5
ACTN1-205ENST00000538545 SLC2A9Q9NRM0 540 aa11.92□□□□□ -0.5
ACTN1-205ENST00000538545 MBD2Q9UBB5 411 aa11.92□□□□□ -0.5
ACTN1-205ENST00000538545 RFPL4AA6NLU0 287 aa11.92□□□□□ -0.5
ACTN1-205ENST00000538545 RFPL4AL1F8VTS6 287 aa11.92□□□□□ -0.5
ACTN1-205ENST00000538545 SLC34A2O95436 690 aa11.92□□□□□ -0.5
ACTN1-205ENST00000538545 TAS2R31P59538 309 aa11.92□□□□□ -0.5
ACTN1-205ENST00000538545 SPIN3Q5JUX0 258 aa11.92□□□□□ -0.5
ACTN1-205ENST00000538545 MRPL24Q96A35 216 aaKnown RBP11.92□□□□□ -0.5
ACTN1-205ENST00000538545 MRPL37Q9BZE1 423 aaKnown RBP11.92□□□□□ -0.5
ACTN1-205ENST00000538545 CLEC4MQ9H2X3 399 aaPredicted RBP11.92□□□□□ -0.5
ACTN1-205ENST00000538545 C1orf123Q9NWV4 160 aa11.92□□□□□ -0.5
ACTN1-205ENST00000538545 ACACBO00763 2458 aa11.92□□□□□ -0.5
ACTN1-205ENST00000538545 POM121CA8CG34 1229 aa11.92□□□□□ -0.5
ACTN1-205ENST00000538545 H0YIZ8 118 aa11.92□□□□□ -0.5
ACTN1-205ENST00000538545 TEX46H3BTG2 121 aa11.92□□□□□ -0.5
ACTN1-205ENST00000538545 HSD17B6O14756 317 aa11.92□□□□□ -0.5
ACTN1-205ENST00000538545 AESQ08117 197 aa11.92□□□□□ -0.5
ACTN1-205ENST00000538545 LY6DQ14210 128 aa11.92□□□□□ -0.5
ACTN1-205ENST00000538545 ABCA11PQ4W5N1 156 aa11.92□□□□□ -0.5
ACTN1-205ENST00000538545 ALKAL2Q6UX46 152 aa11.92□□□□□ -0.5
ACTN1-205ENST00000538545 TMUB2Q71RG4 321 aa11.92□□□□□ -0.5
ACTN1-205ENST00000538545 TMEM171Q8WVE6 324 aa11.92□□□□□ -0.5
ACTN1-205ENST00000538545 POLDIP2Q9Y2S7 368 aa11.92□□□□□ -0.5
ACTN1-205ENST00000538545 SVEP1Q4LDE5 3571 aa11.91□□□□□ -0.5
ACTN1-205ENST00000538545 CACNA1AO00555 2505 aa11.91□□□□□ -0.5
ACTN1-205ENST00000538545 KITLGP21583 273 aa11.91□□□□□ -0.5
ACTN1-205ENST00000538545 MEX3BQ6ZN04 569 aaKnown RBP11.91□□□□□ -0.5
ACTN1-205ENST00000538545 DCTN5Q9BTE1 182 aa11.91□□□□□ -0.5
ACTN1-205ENST00000538545 FAM90A10PA6NDY2 464 aa11.91□□□□□ -0.5
ACTN1-205ENST00000538545 FAM90A18PA6NE21 464 aa11.91□□□□□ -0.5
ACTN1-205ENST00000538545 FAM90A16PA6NEW6 464 aa11.91□□□□□ -0.5
ACTN1-205ENST00000538545 FAM90A20PA6NIJ5 464 aa11.91□□□□□ -0.5
ACTN1-205ENST00000538545 FAM90A8PA6NJQ4 464 aa11.91□□□□□ -0.5
ACTN1-205ENST00000538545 FAM90A7PA6NKC0 464 aa11.91□□□□□ -0.5
ACTN1-205ENST00000538545 FAM90A22PA8MWA6 464 aa11.91□□□□□ -0.5
ACTN1-205ENST00000538545 FAM90A12PA8MX19 464 aa11.91□□□□□ -0.5
ACTN1-205ENST00000538545 FAM90A5PA8MXJ8 464 aa11.91□□□□□ -0.5
ACTN1-205ENST00000538545 FAM90A23PA8MXZ1 464 aa11.91□□□□□ -0.5
ACTN1-205ENST00000538545 HAND1O96004 215 aa11.91□□□□□ -0.5
ACTN1-205ENST00000538545 CTSDP07339 412 aaPredicted RBP11.91□□□□□ -0.5
ACTN1-205ENST00000538545 FAM90A15PP0C7V4 464 aa11.91□□□□□ -0.5
ACTN1-205ENST00000538545 FAM90A13PP0C7W8 464 aa11.91□□□□□ -0.5
ACTN1-205ENST00000538545 FAM90A14PP0C7W9 464 aa11.91□□□□□ -0.5
ACTN1-205ENST00000538545 FAM90A24PP0C7X0 464 aa11.91□□□□□ -0.5
ACTN1-205ENST00000538545 GNRHRP30968 328 aa11.91□□□□□ -0.5
ACTN1-205ENST00000538545 GLP1RP43220 463 aa11.91□□□□□ -0.5
ACTN1-205ENST00000538545 PCSK4Q6UW60 755 aa11.91□□□□□ -0.5
ACTN1-205ENST00000538545 ZNF818PQ6ZRF7 136 aa11.91□□□□□ -0.5
ACTN1-205ENST00000538545 LHFPL5Q8TAF8 219 aa11.91□□□□□ -0.5
ACTN1-205ENST00000538545 LRRC29Q8WV35 223 aa11.91□□□□□ -0.5
ACTN1-205ENST00000538545 PLPPR2Q96GM1 343 aa11.91□□□□□ -0.5
ACTN1-205ENST00000538545 OR2V2Q96R30 315 aa11.91□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms