RNA–Protein interactions for RNA: ENST00000520062.1

HMGB1P46-201, Transcript of high mobility group box 1 pseudogene 46, humanhuman

BASIC

Gene HMGB1P46, Length 610 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P46-201ENST00000520062 TMEM241Q24JQ0 296 aa2.96□□□□□ -1.94
HMGB1P46-201ENST00000520062 NXNL2Q5VZ03 156 aa2.96□□□□□ -1.94
HMGB1P46-201ENST00000520062 DPPA2Q7Z7J5 298 aa2.96□□□□□ -1.94
HMGB1P46-201ENST00000520062 CD302Q8IX05 232 aa2.96□□□□□ -1.94
HMGB1P46-201ENST00000520062 GATD1Q8NB37 220 aa2.96□□□□□ -1.94
HMGB1P46-201ENST00000520062 OR2K2Q8NGT1 345 aa2.96□□□□□ -1.94
HMGB1P46-201ENST00000520062 ZNF514Q96K75 400 aaPredicted RBP2.96□□□□□ -1.94
HMGB1P46-201ENST00000520062 TMEM56Q96MV1 263 aa2.96□□□□□ -1.94
HMGB1P46-201ENST00000520062 EBPLQ9BY08 206 aa2.96□□□□□ -1.94
HMGB1P46-201ENST00000520062 ZNF436Q9C0F3 470 aaPredicted RBP2.96□□□□□ -1.94
HMGB1P46-201ENST00000520062 ING2Q9H160 280 aa2.96□□□□□ -1.94
HMGB1P46-201ENST00000520062 WDR54Q9H977 334 aa2.96□□□□□ -1.94
HMGB1P46-201ENST00000520062 C15orf41Q9Y2V0 281 aa2.96□□□□□ -1.94
HMGB1P46-201ENST00000520062 POLR3AO14802 1390 aaPredicted RBP2.96□□□□□ -1.94
HMGB1P46-201ENST00000520062 SPRR5A0A1B0GTR4 108 aa2.95□□□□□ -1.94
HMGB1P46-201ENST00000520062 OR6C70A6NIJ9 312 aa2.95□□□□□ -1.94
HMGB1P46-201ENST00000520062 K7EM74 188 aa2.95□□□□□ -1.94
HMGB1P46-201ENST00000520062 LIN7AO14910 233 aaPredicted RBP2.95□□□□□ -1.94
HMGB1P46-201ENST00000520062 TPM3P06753 285 aa2.95□□□□□ -1.94
HMGB1P46-201ENST00000520062 MLNP12872 115 aa2.95□□□□□ -1.94
HMGB1P46-201ENST00000520062 GTF2F2P13984 249 aa2.95□□□□□ -1.94
HMGB1P46-201ENST00000520062 ZNF14P17017 642 aaPredicted RBP2.95□□□□□ -1.94
HMGB1P46-201ENST00000520062 DLX6P56179 175 aa2.95□□□□□ -1.94
HMGB1P46-201ENST00000520062 TPM4P67936 248 aa2.95□□□□□ -1.94
HMGB1P46-201ENST00000520062 FAM3AP98173 230 aa2.95□□□□□ -1.94
HMGB1P46-201ENST00000520062 EXOC3L4Q17RC7 722 aa2.95□□□□□ -1.94
HMGB1P46-201ENST00000520062 TMEM69Q5SWH9 247 aa2.95□□□□□ -1.94
HMGB1P46-201ENST00000520062 PLEKHG7Q6ZR37 379 aa2.95□□□□□ -1.94
HMGB1P46-201ENST00000520062 TMEM144Q7Z5S9 345 aa2.95□□□□□ -1.94
HMGB1P46-201ENST00000520062 LFNGQ8NES3 379 aa2.95□□□□□ -1.94
HMGB1P46-201ENST00000520062 OR8S1Q8NH09 359 aa2.95□□□□□ -1.94
HMGB1P46-201ENST00000520062 C2orf15Q8WU43 125 aaKnown RBP2.95□□□□□ -1.94
HMGB1P46-201ENST00000520062 CLDN23Q96B33 292 aa2.95□□□□□ -1.94
HMGB1P46-201ENST00000520062 SEC22CQ9BRL7 303 aa2.95□□□□□ -1.94
HMGB1P46-201ENST00000520062 LLPHQ9BRT6 129 aaKnown RBP2.95□□□□□ -1.94
HMGB1P46-201ENST00000520062 OR51E2Q9H255 320 aa2.95□□□□□ -1.94
HMGB1P46-201ENST00000520062 NOSIPQ9Y314 301 aaKnown RBP2.95□□□□□ -1.94
HMGB1P46-201ENST00000520062 KIAA1671Q9BY89 1806 aa2.95□□□□□ -1.94
HMGB1P46-201ENST00000520062 ATRNO75882 1429 aa2.94□□□□□ -1.94
HMGB1P46-201ENST00000520062 IGHV3-21A0A0B4J1V1 117 aa2.94□□□□□ -1.94
HMGB1P46-201ENST00000520062 FABP12A6NFH5 140 aa2.94□□□□□ -1.94
HMGB1P46-201ENST00000520062 GOLGA6L10A6NI86 522 aa2.94□□□□□ -1.94
HMGB1P46-201ENST00000520062 EFCAB9A8MZ26 197 aa2.94□□□□□ -1.94
HMGB1P46-201ENST00000520062 F5H5K5 113 aa2.94□□□□□ -1.94
HMGB1P46-201ENST00000520062 GPR171O14626 319 aa2.94□□□□□ -1.94
HMGB1P46-201ENST00000520062 CYTH3O43739 400 aa2.94□□□□□ -1.94
HMGB1P46-201ENST00000520062 EPPINO95925 133 aa2.94□□□□□ -1.94
HMGB1P46-201ENST00000520062 UBE2G2P60604 165 aa2.94□□□□□ -1.94
HMGB1P46-201ENST00000520062 RBX1P62877 108 aa2.94□□□□□ -1.94
HMGB1P46-201ENST00000520062 PAFAH1B3Q15102 231 aaKnown RBP2.94□□□□□ -1.94
HMGB1P46-201ENST00000520062 HSP90B2PQ58FF3 399 aa2.94□□□□□ -1.94
HMGB1P46-201ENST00000520062 FAM45BPQ6NSW5 357 aa2.94□□□□□ -1.94
HMGB1P46-201ENST00000520062 CLEC20AQ6ZU45 233 aa2.94□□□□□ -1.94
HMGB1P46-201ENST00000520062 OLIG3Q7RTU3 272 aa2.94□□□□□ -1.94
HMGB1P46-201ENST00000520062 SGPP2Q8IWX5 399 aa2.94□□□□□ -1.94
HMGB1P46-201ENST00000520062 AMN1Q8IY45 258 aa2.94□□□□□ -1.94
HMGB1P46-201ENST00000520062 MUC15Q8N387 334 aa2.94□□□□□ -1.94
HMGB1P46-201ENST00000520062 ZNF561Q8N587 486 aa2.94□□□□□ -1.94
HMGB1P46-201ENST00000520062 OR5L1Q8NGL2 311 aa2.94□□□□□ -1.94
HMGB1P46-201ENST00000520062 FXYD5Q96DB9 178 aa2.94□□□□□ -1.94
HMGB1P46-201ENST00000520062 PRSS27Q9BQR3 290 aa2.94□□□□□ -1.94
HMGB1P46-201ENST00000520062 ULBP1Q9BZM6 244 aa2.94□□□□□ -1.94
HMGB1P46-201ENST00000520062 POMPQ9Y244 141 aa2.94□□□□□ -1.94
HMGB1P46-201ENST00000520062 RAB3GAP2Q9H2M9 1393 aa2.94□□□□□ -1.94
HMGB1P46-201ENST00000520062 IGHV1-45A0A0A0MS14 117 aa2.93□□□□□ -1.94
HMGB1P46-201ENST00000520062 LEUTXA8MZ59 168 aa2.93□□□□□ -1.94
HMGB1P46-201ENST00000520062 C8orf87E5RJ46 101 aa2.93□□□□□ -1.94
HMGB1P46-201ENST00000520062 K7ERS5 55 aa2.93□□□□□ -1.94
HMGB1P46-201ENST00000520062 ISLRO14498 428 aa2.93□□□□□ -1.94
HMGB1P46-201ENST00000520062 SLC31A1O15431 190 aa2.93□□□□□ -1.94
HMGB1P46-201ENST00000520062 PSIP1O75475 530 aaKnown RBP2.93□□□□□ -1.94
HMGB1P46-201ENST00000520062 POP7O75817 140 aaKnown RBP2.93□□□□□ -1.94
HMGB1P46-201ENST00000520062 HLA-AP01891 365 aaKnown RBP2.93□□□□□ -1.94
HMGB1P46-201ENST00000520062 ORM1P02763 201 aa2.93□□□□□ -1.94
HMGB1P46-201ENST00000520062 PFN1P07737 140 aaKnown RBP2.93□□□□□ -1.94
HMGB1P46-201ENST00000520062 PET100P0DJ07 73 aa2.93□□□□□ -1.94
HMGB1P46-201ENST00000520062 PVALBP20472 110 aaPredicted RBP2.93□□□□□ -1.94
HMGB1P46-201ENST00000520062 PRR9Q5T870 116 aa2.93□□□□□ -1.94
HMGB1P46-201ENST00000520062 MTERF4Q7Z6M4 381 aaKnown RBP2.93□□□□□ -1.94
HMGB1P46-201ENST00000520062 SLC13A5Q86YT5 568 aaPredicted RBP2.93□□□□□ -1.94
HMGB1P46-201ENST00000520062 FAM9CQ8IZT9 166 aa2.93□□□□□ -1.94
HMGB1P46-201ENST00000520062 OR4P4Q8NGL7 312 aa2.93□□□□□ -1.94
HMGB1P46-201ENST00000520062 PYURFQ96I23 114 aa2.93□□□□□ -1.94
HMGB1P46-201ENST00000520062 C7orf50Q9BRJ6 194 aaKnown RBP2.93□□□□□ -1.94
HMGB1P46-201ENST00000520062 DHCR7Q9UBM7 475 aaKnown RBP2.93□□□□□ -1.94
HMGB1P46-201ENST00000520062 TBL2Q9Y4P3 447 aaKnown RBP2.93□□□□□ -1.94
HMGB1P46-201ENST00000520062 ATP6V1DQ9Y5K8 247 aa2.93□□□□□ -1.94
HMGB1P46-201ENST00000520062 BAZ2AQ9UIF9 1905 aaKnown RBP2.92□□□□□ -1.94
HMGB1P46-201ENST00000520062 C1orf232A0A0U1RR37 186 aa2.92□□□□□ -1.94
HMGB1P46-201ENST00000520062 A0A1W2PQ67 120 aa2.92□□□□□ -1.94
HMGB1P46-201ENST00000520062 F5H5P2 479 aa2.92□□□□□ -1.94
HMGB1P46-201ENST00000520062 RTL8CO15255 209 aa2.92□□□□□ -1.94
HMGB1P46-201ENST00000520062 FGF16O43320 207 aa2.92□□□□□ -1.94
HMGB1P46-201ENST00000520062 IGHG2P01859 326 aa2.92□□□□□ -1.94
HMGB1P46-201ENST00000520062 CD40LGP29965 261 aa2.92□□□□□ -1.94
HMGB1P46-201ENST00000520062 RCVRNP35243 200 aa2.92□□□□□ -1.94
HMGB1P46-201ENST00000520062 COTL1Q14019 142 aa2.92□□□□□ -1.94
HMGB1P46-201ENST00000520062 IGFBP7Q16270 282 aa2.92□□□□□ -1.94
HMGB1P46-201ENST00000520062 KRTAP13-3Q3SY46 172 aa2.92□□□□□ -1.94
HMGB1P46-201ENST00000520062 SDHAF4Q5VUM1 108 aa2.92□□□□□ -1.94
Retrieved 100 of 20,778 RNA–protein pairs in 44 ms