RNA–Protein interactions for RNA: ENST00000514830.5

PDLIM5-220, Transcript of PDZ and LIM domain 5, humanhuman

TSL 2

Gene PDLIM5, Length 802 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-220ENST00000514830 C8orf46Q8TAG6 207 aa9.94□□□□□ -0.82
PDLIM5-220ENST00000514830 C15orf40Q8WUR7 153 aa9.94□□□□□ -0.82
PDLIM5-220ENST00000514830 ARHGAP5-AS1Q96IT6 56 aa9.94□□□□□ -0.82
PDLIM5-220ENST00000514830 Q96MF0 132 aa9.94□□□□□ -0.82
PDLIM5-220ENST00000514830 SOSTQ9BQB4 213 aa9.94□□□□□ -0.82
PDLIM5-220ENST00000514830 PECRQ9BY49 303 aa9.94□□□□□ -0.82
PDLIM5-220ENST00000514830 REG4Q9BYZ8 158 aa9.94□□□□□ -0.82
PDLIM5-220ENST00000514830 RIMS4Q9H426 269 aaPredicted RBP9.94□□□□□ -0.82
PDLIM5-220ENST00000514830 PLEKHJ1Q9NW61 149 aa9.94□□□□□ -0.82
PDLIM5-220ENST00000514830 SLC25A10Q9UBX3 287 aaPredicted RBP9.94□□□□□ -0.82
PDLIM5-220ENST00000514830 CLN8Q9UBY8 286 aa9.94□□□□□ -0.82
PDLIM5-220ENST00000514830 KCNK7Q9Y2U2 307 aa9.94□□□□□ -0.82
PDLIM5-220ENST00000514830 TRBV23-1A0A0A0MS06 115 aa9.93□□□□□ -0.82
PDLIM5-220ENST00000514830 TRBV6-6A0A0A6YYG2 114 aa9.93□□□□□ -0.82
PDLIM5-220ENST00000514830 PPIAL4CA0A0B4J2A2 164 aa9.93□□□□□ -0.82
PDLIM5-220ENST00000514830 A0A1B0GW55 424 aa9.93□□□□□ -0.82
PDLIM5-220ENST00000514830 H7C1Q1 480 aa9.93□□□□□ -0.82
PDLIM5-220ENST00000514830 NAPSAO96009 420 aa9.93□□□□□ -0.82
PDLIM5-220ENST00000514830 DUX4L2P0CJ85 424 aa9.93□□□□□ -0.82
PDLIM5-220ENST00000514830 DUX4L3P0CJ86 424 aa9.93□□□□□ -0.82
PDLIM5-220ENST00000514830 DUX4L4P0CJ87 422 aa9.93□□□□□ -0.82
PDLIM5-220ENST00000514830 DUX4L5P0CJ88 424 aa9.93□□□□□ -0.82
PDLIM5-220ENST00000514830 DUX4L6P0CJ89 424 aa9.93□□□□□ -0.82
PDLIM5-220ENST00000514830 DUX4L7P0CJ90 424 aa9.93□□□□□ -0.82
PDLIM5-220ENST00000514830 FOSL1P15407 271 aa9.93□□□□□ -0.82
PDLIM5-220ENST00000514830 TNFSF8P32971 234 aa9.93□□□□□ -0.82
PDLIM5-220ENST00000514830 S100A5P33763 92 aa9.93□□□□□ -0.82
PDLIM5-220ENST00000514830 TALDO1P37837 337 aa9.93□□□□□ -0.82
PDLIM5-220ENST00000514830 PITPNAQ00169 270 aa9.93□□□□□ -0.82
PDLIM5-220ENST00000514830 MEF2CQ06413 473 aaPredicted RBP9.93□□□□□ -0.82
PDLIM5-220ENST00000514830 SCN1BQ07699 218 aa9.93□□□□□ -0.82
PDLIM5-220ENST00000514830 PDCD1Q15116 288 aa9.93□□□□□ -0.82
PDLIM5-220ENST00000514830 GRK1Q15835 563 aa9.93□□□□□ -0.82
PDLIM5-220ENST00000514830 ESCO2Q56NI9 601 aa9.93□□□□□ -0.82
PDLIM5-220ENST00000514830 RSBN1Q5VWQ0 802 aaPredicted RBP9.93□□□□□ -0.82
PDLIM5-220ENST00000514830 CD276Q5ZPR3 534 aa9.93□□□□□ -0.82
PDLIM5-220ENST00000514830 DUX4L9Q6RFH8 374 aaPredicted RBP9.93□□□□□ -0.82
PDLIM5-220ENST00000514830 ZNF497Q6ZNH5 498 aa9.93□□□□□ -0.82
PDLIM5-220ENST00000514830 C6orf201Q7Z4U5 140 aa9.93□□□□□ -0.82
PDLIM5-220ENST00000514830 CCDC190Q86UF4 302 aa9.93□□□□□ -0.82
PDLIM5-220ENST00000514830 ASCC1Q8N9N2 400 aaKnown RBP9.93□□□□□ -0.82
PDLIM5-220ENST00000514830 WFDC11Q8NEX6 87 aa9.93□□□□□ -0.82
PDLIM5-220ENST00000514830 DACT3Q96B18 629 aaPredicted RBP9.93□□□□□ -0.82
PDLIM5-220ENST00000514830 SULT4A1Q9BR01 284 aa9.93□□□□□ -0.82
PDLIM5-220ENST00000514830 SSBP3Q9BWW4 388 aaPredicted RBP9.93□□□□□ -0.82
PDLIM5-220ENST00000514830 PPA2Q9H2U2 334 aa9.93□□□□□ -0.82
PDLIM5-220ENST00000514830 AUNIPQ9H7T9 357 aa9.93□□□□□ -0.82
PDLIM5-220ENST00000514830 DUX4Q9UBX2 424 aa9.93□□□□□ -0.82
PDLIM5-220ENST00000514830 LPAR3Q9UBY5 353 aa9.93□□□□□ -0.82
PDLIM5-220ENST00000514830 ZANQ9Y493 2812 aa9.92□□□□□ -0.82
PDLIM5-220ENST00000514830 KIAA1324LA8MWY0 1029 aaPredicted RBP9.92□□□□□ -0.82
PDLIM5-220ENST00000514830 FAM25AB3EWG3 89 aa9.92□□□□□ -0.82
PDLIM5-220ENST00000514830 FAM25CB3EWG5 89 aa9.92□□□□□ -0.82
PDLIM5-220ENST00000514830 FAM25GB3EWG6 89 aa9.92□□□□□ -0.82
PDLIM5-220ENST00000514830 FOXH1O75593 365 aa9.92□□□□□ -0.82
PDLIM5-220ENST00000514830 TFF1P04155 84 aa9.92□□□□□ -0.82
PDLIM5-220ENST00000514830 SELLP14151 372 aa9.92□□□□□ -0.82
PDLIM5-220ENST00000514830 P2RX3P56373 397 aa9.92□□□□□ -0.82
PDLIM5-220ENST00000514830 TAS2R20P59543 309 aa9.92□□□□□ -0.82
PDLIM5-220ENST00000514830 GNB2P62879 340 aa9.92□□□□□ -0.82
PDLIM5-220ENST00000514830 PAX2Q02962 417 aa9.92□□□□□ -0.82
PDLIM5-220ENST00000514830 SRSF7Q16629 238 aaKnown RBP eCLIP9.92□□□□□ -0.82
PDLIM5-220ENST00000514830 CR1LQ2VPA4 569 aa9.92□□□□□ -0.82
PDLIM5-220ENST00000514830 CDNFQ49AH0 187 aa9.92□□□□□ -0.82
PDLIM5-220ENST00000514830 TMEM69Q5SWH9 247 aa9.92□□□□□ -0.82
PDLIM5-220ENST00000514830 HACD4Q5VWC8 232 aa9.92□□□□□ -0.82
PDLIM5-220ENST00000514830 CNIH2Q6PI25 160 aa9.92□□□□□ -0.82
PDLIM5-220ENST00000514830 GDPD3Q7L5L3 318 aa9.92□□□□□ -0.82
PDLIM5-220ENST00000514830 ZNF554Q86TJ5 538 aa9.92□□□□□ -0.82
PDLIM5-220ENST00000514830 LY6G5BQ8NDX9 201 aa9.92□□□□□ -0.82
PDLIM5-220ENST00000514830 TMEM185AQ8NFB2 350 aa9.92□□□□□ -0.82
PDLIM5-220ENST00000514830 OR4M1Q8NGD0 313 aa9.92□□□□□ -0.82
PDLIM5-220ENST00000514830 PLPPR1Q8TBJ4 325 aa9.92□□□□□ -0.82
PDLIM5-220ENST00000514830 CORO2AQ92828 525 aa9.92□□□□□ -0.82
PDLIM5-220ENST00000514830 COQ2Q96H96 371 aa9.92□□□□□ -0.82
PDLIM5-220ENST00000514830 DCTN5Q9BTE1 182 aa9.92□□□□□ -0.82
PDLIM5-220ENST00000514830 TMUB1Q9BVT8 246 aa9.92□□□□□ -0.82
PDLIM5-220ENST00000514830 TRAV18A0A075B6X5 111 aa9.91□□□□□ -0.82
PDLIM5-220ENST00000514830 TMEM30CPA0ZSE6 113 aa9.91□□□□□ -0.82
PDLIM5-220ENST00000514830 CTDSPLO15194 276 aa9.91□□□□□ -0.82
PDLIM5-220ENST00000514830 HLA-DQB1P01920 261 aa9.91□□□□□ -0.82
PDLIM5-220ENST00000514830 MT-ND4P03905 459 aa9.91□□□□□ -0.82
PDLIM5-220ENST00000514830 GNB3P16520 340 aa9.91□□□□□ -0.82
PDLIM5-220ENST00000514830 SEC61A1P61619 476 aaKnown RBP9.91□□□□□ -0.82
PDLIM5-220ENST00000514830 MRPS10P82664 201 aaKnown RBP9.91□□□□□ -0.82
PDLIM5-220ENST00000514830 NKAPLQ5M9Q1 402 aa9.91□□□□□ -0.82
PDLIM5-220ENST00000514830 ZNF880Q6PDB4 577 aa9.91□□□□□ -0.82
PDLIM5-220ENST00000514830 Q6ZS49 121 aa9.91□□□□□ -0.82
PDLIM5-220ENST00000514830 MOB1BQ7L9L4 216 aa9.91□□□□□ -0.82
PDLIM5-220ENST00000514830 BPIFB2Q8N4F0 458 aa9.91□□□□□ -0.82
PDLIM5-220ENST00000514830 DIRAS2Q96HU8 199 aa9.91□□□□□ -0.82
PDLIM5-220ENST00000514830 FAAP24Q9BTP7 215 aa9.91□□□□□ -0.82
PDLIM5-220ENST00000514830 CHST6Q9GZX3 395 aa9.91□□□□□ -0.82
PDLIM5-220ENST00000514830 NARFLQ9H6Q4 476 aa9.91□□□□□ -0.82
PDLIM5-220ENST00000514830 LINC00574Q9H8X3 128 aa9.91□□□□□ -0.82
PDLIM5-220ENST00000514830 SCPEP1Q9HB40 452 aa9.91□□□□□ -0.82
PDLIM5-220ENST00000514830 C12orf4Q9NQ89 552 aa9.91□□□□□ -0.82
PDLIM5-220ENST00000514830 MBNL3Q9NUK0 354 aaKnown RBP9.91□□□□□ -0.82
PDLIM5-220ENST00000514830 ETAA1Q9NY74 926 aa9.91□□□□□ -0.82
PDLIM5-220ENST00000514830 EXTL2Q9UBQ6 330 aa9.91□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 88.6 ms