RNA–Protein interactions for RNA: ENST00000508171.5

LIN54-207, Transcript of lin-54 DREAM MuvB core complex component, humanhuman

TSL 1 (best)

Gene LIN54, Length 2,684 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIN54-207ENST00000508171 IL17BQ9UHF5 180 aa9.36□□□□□ -0.91
LIN54-207ENST00000508171 FBXO9Q9UK97 447 aaPredicted RBP9.36□□□□□ -0.91
LIN54-207ENST00000508171 TMED3Q9Y3Q3 217 aa9.36□□□□□ -0.91
LIN54-207ENST00000508171 KIAA2026Q5HYC2 2103 aa9.35□□□□□ -0.91
LIN54-207ENST00000508171 NBEAQ8NFP9 2946 aa9.35□□□□□ -0.91
LIN54-207ENST00000508171 IGKV1-6A0A0C4DH72 117 aa9.35□□□□□ -0.91
LIN54-207ENST00000508171 FAM24AA6NFZ4 105 aa9.35□□□□□ -0.91
LIN54-207ENST00000508171 HS3ST1O14792 307 aa9.35□□□□□ -0.91
LIN54-207ENST00000508171 DANCRP0C864 163 aa9.35□□□□□ -0.91
LIN54-207ENST00000508171 P2RY1P47900 373 aa9.35□□□□□ -0.91
LIN54-207ENST00000508171 DVL1P1P54792 670 aaPredicted RBP9.35□□□□□ -0.91
LIN54-207ENST00000508171 PLGLB1Q02325 96 aa9.35□□□□□ -0.91
LIN54-207ENST00000508171 IL13RA2Q14627 380 aa9.35□□□□□ -0.91
LIN54-207ENST00000508171 GPR157Q5UAW9 335 aa9.35□□□□□ -0.91
LIN54-207ENST00000508171 DPPA2Q7Z7J5 298 aa9.35□□□□□ -0.91
LIN54-207ENST00000508171 POM121L2Q96KW2 1035 aa9.35□□□□□ -0.91
LIN54-207ENST00000508171 C12orf49Q9H741 205 aa9.35□□□□□ -0.91
LIN54-207ENST00000508171 MLXQ9UH92 298 aa9.35□□□□□ -0.91
LIN54-207ENST00000508171 PRSS50Q9UI38 385 aa9.35□□□□□ -0.91
LIN54-207ENST00000508171 ATPIF1Q9UII2 106 aa9.35□□□□□ -0.91
LIN54-207ENST00000508171 UBE2J1Q9Y385 318 aaPredicted RBP9.35□□□□□ -0.91
LIN54-207ENST00000508171 DIDO1Q9BTC0 2240 aaKnown RBP9.35□□□□□ -0.91
LIN54-207ENST00000508171 SLC22A20A6NK97 555 aa9.35□□□□□ -0.91
LIN54-207ENST00000508171 TRAPPC2LH3BP13 241 aa9.35□□□□□ -0.91
LIN54-207ENST00000508171 SLC33A1O00400 549 aaPredicted RBP9.35□□□□□ -0.91
LIN54-207ENST00000508171 HSD17B6O14756 317 aa9.35□□□□□ -0.91
LIN54-207ENST00000508171 TSPAN15O95858 294 aa9.35□□□□□ -0.91
LIN54-207ENST00000508171 TK1P04183 234 aa9.35□□□□□ -0.91
LIN54-207ENST00000508171 SPP1P10451 314 aa9.35□□□□□ -0.91
LIN54-207ENST00000508171 AKR1C3P42330 323 aa9.35□□□□□ -0.91
LIN54-207ENST00000508171 POLR2GP62487 172 aaKnown RBP eCLIP9.35□□□□□ -0.91
LIN54-207ENST00000508171 FLI1Q01543 452 aaPredicted RBP9.35□□□□□ -0.91
LIN54-207ENST00000508171 HIKESHIQ53FT3 197 aa9.35□□□□□ -0.91
LIN54-207ENST00000508171 CXorf66Q5JRM2 361 aaPredicted RBP9.35□□□□□ -0.91
LIN54-207ENST00000508171 GINS3Q9BRX5 216 aa9.35□□□□□ -0.91
LIN54-207ENST00000508171 MAGT1Q9H0U3 335 aa9.35□□□□□ -0.91
LIN54-207ENST00000508171 CCL28Q9NRJ3 127 aa9.35□□□□□ -0.91
LIN54-207ENST00000508171 RYDENQ9NUL5 291 aaKnown RBP9.35□□□□□ -0.91
LIN54-207ENST00000508171 BORCS7-ASMTA0A0B4J1R7 106 aa9.34□□□□□ -0.91
LIN54-207ENST00000508171 A0A1B0GV50 99 aa9.34□□□□□ -0.91
LIN54-207ENST00000508171 CD300LBA8K4G0 201 aa9.34□□□□□ -0.91
LIN54-207ENST00000508171 TRDCB7Z8K6 153 aa9.34□□□□□ -0.91
LIN54-207ENST00000508171 TNFSF12O43508 249 aa9.34□□□□□ -0.91
LIN54-207ENST00000508171 NXPH3O95157 252 aa9.34□□□□□ -0.91
LIN54-207ENST00000508171 SEC11BP0C7V7 166 aa9.34□□□□□ -0.91
LIN54-207ENST00000508171 PRKACAP17612 351 aa9.34□□□□□ -0.91
LIN54-207ENST00000508171 OMGP23515 440 aa9.34□□□□□ -0.91
LIN54-207ENST00000508171 SNCAP37840 140 aa9.34□□□□□ -0.91
LIN54-207ENST00000508171 PPT1P50897 306 aa9.34□□□□□ -0.91
LIN54-207ENST00000508171 ZNF695Q8IW36 515 aa9.34□□□□□ -0.91
LIN54-207ENST00000508171 C17orf78Q8N4C9 275 aa9.34□□□□□ -0.91
LIN54-207ENST00000508171 RDH5Q92781 318 aa9.34□□□□□ -0.91
LIN54-207ENST00000508171 BOD1Q96IK1 185 aa9.34□□□□□ -0.91
LIN54-207ENST00000508171 SCRT1Q9BWW7 348 aa9.34□□□□□ -0.91
LIN54-207ENST00000508171 POMT1Q9Y6A1 747 aa9.34□□□□□ -0.91
LIN54-207ENST00000508171 PCNX2A6NKB5 2137 aa9.34□□□□□ -0.91
LIN54-207ENST00000508171 MEX3AA1L020 520 aaKnown RBP9.34□□□□□ -0.91
LIN54-207ENST00000508171 FAM90A10PA6NDY2 464 aa9.34□□□□□ -0.91
LIN54-207ENST00000508171 FAM90A18PA6NE21 464 aa9.34□□□□□ -0.91
LIN54-207ENST00000508171 FAM90A16PA6NEW6 464 aa9.34□□□□□ -0.91
LIN54-207ENST00000508171 FAM90A20PA6NIJ5 464 aa9.34□□□□□ -0.91
LIN54-207ENST00000508171 FAM90A8PA6NJQ4 464 aa9.34□□□□□ -0.91
LIN54-207ENST00000508171 FAM90A7PA6NKC0 464 aa9.34□□□□□ -0.91
LIN54-207ENST00000508171 FAM90A22PA8MWA6 464 aa9.34□□□□□ -0.91
LIN54-207ENST00000508171 FAM90A12PA8MX19 464 aa9.34□□□□□ -0.91
LIN54-207ENST00000508171 FAM90A5PA8MXJ8 464 aa9.34□□□□□ -0.91
LIN54-207ENST00000508171 FAM90A23PA8MXZ1 464 aa9.34□□□□□ -0.91
LIN54-207ENST00000508171 SS18L1O75177 396 aaPredicted RBP9.34□□□□□ -0.91
LIN54-207ENST00000508171 FAM90A15PP0C7V4 464 aa9.34□□□□□ -0.91
LIN54-207ENST00000508171 FAM90A13PP0C7W8 464 aa9.34□□□□□ -0.91
LIN54-207ENST00000508171 FAM90A14PP0C7W9 464 aa9.34□□□□□ -0.91
LIN54-207ENST00000508171 FAM90A24PP0C7X0 464 aa9.34□□□□□ -0.91
LIN54-207ENST00000508171 IL32P24001 234 aa9.34□□□□□ -0.91
LIN54-207ENST00000508171 WNT5AP41221 380 aa9.34□□□□□ -0.91
LIN54-207ENST00000508171 EWSR1Q01844 656 aaKnown RBP eCLIP9.34□□□□□ -0.91
LIN54-207ENST00000508171 CLINT1Q14677 625 aa9.34□□□□□ -0.91
LIN54-207ENST00000508171 GNMTQ14749 295 aa9.34□□□□□ -0.91
LIN54-207ENST00000508171 MKXQ8IYA7 352 aa9.34□□□□□ -0.91
LIN54-207ENST00000508171 SELENOHQ8IZQ5 122 aaKnown RBP9.34□□□□□ -0.91
LIN54-207ENST00000508171 ZNF565Q8N9K5 539 aa9.34□□□□□ -0.91
LIN54-207ENST00000508171 OR10Z1Q8NGY1 313 aa9.34□□□□□ -0.91
LIN54-207ENST00000508171 LILRB1Q8NHL6 650 aaPredicted RBP9.34□□□□□ -0.91
LIN54-207ENST00000508171 RXFP4Q8TDU9 374 aa9.34□□□□□ -0.91
LIN54-207ENST00000508171 GPR87Q9BY21 358 aa9.34□□□□□ -0.91
LIN54-207ENST00000508171 ZFP57Q9NU63 452 aa9.34□□□□□ -0.91
LIN54-207ENST00000508171 FAM86C1Q9NVL1 165 aa9.34□□□□□ -0.91
LIN54-207ENST00000508171 CACFD1Q9UGQ2 172 aa9.34□□□□□ -0.91
LIN54-207ENST00000508171 LIPGQ9Y5X9 500 aa9.34□□□□□ -0.91
LIN54-207ENST00000508171 ADAM20O43506 726 aa9.33□□□□□ -0.92
LIN54-207ENST00000508171 NDUFA2O43678 99 aa9.33□□□□□ -0.92
LIN54-207ENST00000508171 PRH1P02810 166 aa9.33□□□□□ -0.92
LIN54-207ENST00000508171 ZNF883P0CG24 379 aa9.33□□□□□ -0.92
LIN54-207ENST00000508171 NKX2-1P43699 371 aaPredicted RBP9.33□□□□□ -0.92
LIN54-207ENST00000508171 CAMLGP49069 296 aa9.33□□□□□ -0.92
LIN54-207ENST00000508171 SPATA46Q5T0L3 261 aa9.33□□□□□ -0.92
LIN54-207ENST00000508171 Q6ZS49 121 aa9.33□□□□□ -0.92
LIN54-207ENST00000508171 SAXO1Q8IYX7 474 aa9.33□□□□□ -0.92
LIN54-207ENST00000508171 OR2C3Q8N628 320 aa9.33□□□□□ -0.92
LIN54-207ENST00000508171 SUMF2Q8NBJ7 301 aa9.33□□□□□ -0.92
LIN54-207ENST00000508171 OR5A2Q8NGI9 324 aa9.33□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms