RNA–Protein interactions for RNA: ENST00000508037.1

HMGB3P16-201, Transcript of high mobility group box 3 pseudogene 16, humanhuman

BASIC

Gene HMGB3P16, Length 287 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P16-201ENST00000508037 C11orf1Q9H5F2 150 aa4.3□□□□□ -1.72
HMGB3P16-201ENST00000508037 ZNF442Q9H7R0 627 aa4.3□□□□□ -1.72
HMGB3P16-201ENST00000508037 GPR173Q9NS66 373 aa4.3□□□□□ -1.72
HMGB3P16-201ENST00000508037 FGF21Q9NSA1 209 aa4.3□□□□□ -1.72
HMGB3P16-201ENST00000508037 PLEK2Q9NYT0 353 aa4.3□□□□□ -1.72
HMGB3P16-201ENST00000508037 CISD1Q9NZ45 108 aaKnown RBP4.3□□□□□ -1.72
HMGB3P16-201ENST00000508037 ZNF319Q9P2F9 582 aa4.3□□□□□ -1.72
HMGB3P16-201ENST00000508037 MMP24Q9Y5R2 645 aa4.3□□□□□ -1.72
HMGB3P16-201ENST00000508037 MTCH2Q9Y6C9 303 aa4.3□□□□□ -1.72
HMGB3P16-201ENST00000508037 ZNF816-ZNF321PA0A0X1KG74 233 aa4.29□□□□□ -1.72
HMGB3P16-201ENST00000508037 A0A1W2PR77 199 aa4.29□□□□□ -1.72
HMGB3P16-201ENST00000508037 IGSF23A1L1A6 192 aa4.29□□□□□ -1.72
HMGB3P16-201ENST00000508037 NKX2-6A6NCS4 301 aa4.29□□□□□ -1.72
HMGB3P16-201ENST00000508037 OR6C6A6NF89 314 aa4.29□□□□□ -1.72
HMGB3P16-201ENST00000508037 FAM24AA6NFZ4 105 aa4.29□□□□□ -1.72
HMGB3P16-201ENST00000508037 KIAA1324LA8MWY0 1029 aaPredicted RBP4.29□□□□□ -1.72
HMGB3P16-201ENST00000508037 H0Y980 276 aa4.29□□□□□ -1.72
HMGB3P16-201ENST00000508037 MKRN2OSH3BPM6 223 aa4.29□□□□□ -1.72
HMGB3P16-201ENST00000508037 SLC31A2O15432 143 aa4.29□□□□□ -1.72
HMGB3P16-201ENST00000508037 EFNA2O43921 213 aa4.29□□□□□ -1.72
HMGB3P16-201ENST00000508037 SSSCA1O60232 199 aa4.29□□□□□ -1.72
HMGB3P16-201ENST00000508037 RAMP1O60894 148 aa4.29□□□□□ -1.72
HMGB3P16-201ENST00000508037 C1QL1O75973 258 aa4.29□□□□□ -1.72
HMGB3P16-201ENST00000508037 CNOT4O95628 575 aaKnown RBP4.29□□□□□ -1.72
HMGB3P16-201ENST00000508037 ONECUT2O95948 504 aa4.29□□□□□ -1.72
HMGB3P16-201ENST00000508037 GCGP01275 180 aa4.29□□□□□ -1.72
HMGB3P16-201ENST00000508037 WNT2P09544 360 aa4.29□□□□□ -1.72
HMGB3P16-201ENST00000508037 BCL2P10415 239 aa4.29□□□□□ -1.72
HMGB3P16-201ENST00000508037 AADACP22760 399 aa4.29□□□□□ -1.72
HMGB3P16-201ENST00000508037 UCP1P25874 307 aa4.29□□□□□ -1.72
HMGB3P16-201ENST00000508037 DDTP30046 118 aa4.29□□□□□ -1.72
HMGB3P16-201ENST00000508037 OPRM1P35372 400 aa4.29□□□□□ -1.72
HMGB3P16-201ENST00000508037 GPX4P36969 197 aaPredicted RBP4.29□□□□□ -1.72
HMGB3P16-201ENST00000508037 FHITP49789 147 aa4.29□□□□□ -1.72
HMGB3P16-201ENST00000508037 DYNLT3P51808 116 aa4.29□□□□□ -1.72
HMGB3P16-201ENST00000508037 CEBPGP53567 150 aa4.29□□□□□ -1.72
HMGB3P16-201ENST00000508037 RBM11P57052 281 aaKnown RBP4.29□□□□□ -1.72
HMGB3P16-201ENST00000508037 OR1D5P58170 312 aa4.29□□□□□ -1.72
HMGB3P16-201ENST00000508037 TAS2R60P59551 318 aa4.29□□□□□ -1.72
HMGB3P16-201ENST00000508037 HBG1P69891 147 aa4.29□□□□□ -1.72
HMGB3P16-201ENST00000508037 HBG2P69892 147 aa4.29□□□□□ -1.72
HMGB3P16-201ENST00000508037 SERF2P84101 59 aa4.29□□□□□ -1.72
HMGB3P16-201ENST00000508037 ID3Q02535 119 aa4.29□□□□□ -1.72
HMGB3P16-201ENST00000508037 TFF2Q03403 129 aa4.29□□□□□ -1.72
HMGB3P16-201ENST00000508037 HYAL1Q12794 435 aa4.29□□□□□ -1.72
HMGB3P16-201ENST00000508037 TGIF1Q15583 401 aa4.29□□□□□ -1.72
HMGB3P16-201ENST00000508037 SSX2Q16385 188 aa4.29□□□□□ -1.72
HMGB3P16-201ENST00000508037 MPV17LQ2QL34 196 aa4.29□□□□□ -1.72
HMGB3P16-201ENST00000508037 DEFB133Q30KQ1 61 aa4.29□□□□□ -1.72
HMGB3P16-201ENST00000508037 NKAIN1Q4KMZ8 207 aa4.29□□□□□ -1.72
HMGB3P16-201ENST00000508037 C9orf152Q5JTZ5 239 aa4.29□□□□□ -1.72
HMGB3P16-201ENST00000508037 SPIN3Q5JUX0 258 aa4.29□□□□□ -1.72
HMGB3P16-201ENST00000508037 FAM69BQ5VUD6 431 aa4.29□□□□□ -1.72
HMGB3P16-201ENST00000508037 TMEM42Q69YG0 159 aa4.29□□□□□ -1.72
HMGB3P16-201ENST00000508037 TCEAL6Q6IPX3 200 aa4.29□□□□□ -1.72
HMGB3P16-201ENST00000508037 CRIP3Q6Q6R5 217 aa4.29□□□□□ -1.72
HMGB3P16-201ENST00000508037 MEX3BQ6ZN04 569 aaKnown RBP4.29□□□□□ -1.72
HMGB3P16-201ENST00000508037 SYT13Q7L8C5 426 aa4.29□□□□□ -1.72
HMGB3P16-201ENST00000508037 CPEB2Q7Z5Q1 589 aaKnown RBP4.29□□□□□ -1.72
HMGB3P16-201ENST00000508037 MRGPRGQ86SM5 289 aa4.29□□□□□ -1.72
HMGB3P16-201ENST00000508037 LINC00596Q86U02 117 aa4.29□□□□□ -1.72
HMGB3P16-201ENST00000508037 TBC1D26Q86UD7 250 aa4.29□□□□□ -1.72
HMGB3P16-201ENST00000508037 PPP1R3BQ86XI6 285 aa4.29□□□□□ -1.72
HMGB3P16-201ENST00000508037 TGIF2LYQ8IUE0 185 aa4.29□□□□□ -1.72
HMGB3P16-201ENST00000508037 WDFY1Q8IWB7 410 aa4.29□□□□□ -1.72
HMGB3P16-201ENST00000508037 TMEM183AQ8IXX5 376 aa4.29□□□□□ -1.72
HMGB3P16-201ENST00000508037 C20orf196Q8IYI0 205 aa4.29□□□□□ -1.72
HMGB3P16-201ENST00000508037 C7orf61Q8IZ16 206 aa4.29□□□□□ -1.72
HMGB3P16-201ENST00000508037 SELENOHQ8IZQ5 122 aaKnown RBP4.29□□□□□ -1.72
HMGB3P16-201ENST00000508037 TMEM123Q8N131 208 aa4.29□□□□□ -1.72
HMGB3P16-201ENST00000508037 GPR137CQ8N3F9 429 aa4.29□□□□□ -1.72
HMGB3P16-201ENST00000508037 CYB561D1Q8N8Q1 229 aa4.29□□□□□ -1.72
HMGB3P16-201ENST00000508037 OR10AD1Q8NGE0 317 aa4.29□□□□□ -1.72
HMGB3P16-201ENST00000508037 OR5C1Q8NGR4 320 aa4.29□□□□□ -1.72
HMGB3P16-201ENST00000508037 OR1F12Q8NHA8 337 aa4.29□□□□□ -1.72
HMGB3P16-201ENST00000508037 OR2V1Q8NHB1 315 aa4.29□□□□□ -1.72
HMGB3P16-201ENST00000508037 MBD3L1Q8WWY6 194 aa4.29□□□□□ -1.72
HMGB3P16-201ENST00000508037 GTF3AQ92664 365 aaKnown RBP4.29□□□□□ -1.72
HMGB3P16-201ENST00000508037 BSCL2Q96G97 398 aaPredicted RBP4.29□□□□□ -1.72
HMGB3P16-201ENST00000508037 ACY3Q96HD9 319 aa4.29□□□□□ -1.72
HMGB3P16-201ENST00000508037 PACRGQ96M98 296 aaPredicted RBP4.29□□□□□ -1.72
HMGB3P16-201ENST00000508037 OR5B12Q96R08 314 aa4.29□□□□□ -1.72
HMGB3P16-201ENST00000508037 SSX3Q99909 188 aa4.29□□□□□ -1.72
HMGB3P16-201ENST00000508037 RARRES2Q99969 163 aa4.29□□□□□ -1.72
HMGB3P16-201ENST00000508037 WDR77Q9BQA1 342 aaPredicted RBP4.29□□□□□ -1.72
HMGB3P16-201ENST00000508037 HDHD3Q9BSH5 251 aaPredicted RBP4.29□□□□□ -1.72
HMGB3P16-201ENST00000508037 SOX7Q9BT81 388 aa4.29□□□□□ -1.72
HMGB3P16-201ENST00000508037 CABLES2Q9BTV7 478 aa4.29□□□□□ -1.72
HMGB3P16-201ENST00000508037 DEFB126Q9BYW3 111 aa4.29□□□□□ -1.72
HMGB3P16-201ENST00000508037 PLK3Q9H4B4 646 aa4.29□□□□□ -1.72
HMGB3P16-201ENST00000508037 SMOC1Q9H4F8 434 aa4.29□□□□□ -1.72
HMGB3P16-201ENST00000508037 LRFN1Q9P244 771 aa4.29□□□□□ -1.72
HMGB3P16-201ENST00000508037 MYOTQ9UBF9 498 aa4.29□□□□□ -1.72
HMGB3P16-201ENST00000508037 VAX2Q9UIW0 290 aa4.29□□□□□ -1.72
HMGB3P16-201ENST00000508037 ZDHHC8Q9ULC8 765 aa4.29□□□□□ -1.72
HMGB3P16-201ENST00000508037 ST3GAL6Q9Y274 331 aa4.29□□□□□ -1.72
HMGB3P16-201ENST00000508037 LIPGQ9Y5X9 500 aa4.29□□□□□ -1.72
HMGB3P16-201ENST00000508037 DOCK8Q8NF50 2099 aa4.29□□□□□ -1.72
HMGB3P16-201ENST00000508037 MYO7AQ13402 2215 aa4.29□□□□□ -1.72
HMGB3P16-201ENST00000508037 A0A087X0M5 115 aa4.28□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 50.7 ms