RNA–Protein interactions for RNA: ENST00000505065.1

CDC42SE2-208, Transcript of CDC42 small effector 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDC42SE2, Length 4,352 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE2-208ENST00000505065 AVPI1Q5T686 147 aa6.8□□□□□ -1.32
CDC42SE2-208ENST00000505065 TMEM200BQ69YZ2 307 aa6.8□□□□□ -1.32
CDC42SE2-208ENST00000505065 FIP1L1Q6UN15 594 aaKnown RBP6.8□□□□□ -1.32
CDC42SE2-208ENST00000505065 TBX15Q96SF7 602 aa6.8□□□□□ -1.32
CDC42SE2-208ENST00000505065 CCL13Q99616 98 aa6.8□□□□□ -1.32
CDC42SE2-208ENST00000505065 NKX3-1Q99801 234 aaPredicted RBP6.8□□□□□ -1.32
CDC42SE2-208ENST00000505065 SULT4A1Q9BR01 284 aa6.8□□□□□ -1.32
CDC42SE2-208ENST00000505065 TMEM59Q9BXS4 323 aa6.8□□□□□ -1.32
CDC42SE2-208ENST00000505065 RNF223E7ERA6 249 aa6.8□□□□□ -1.32
CDC42SE2-208ENST00000505065 HLA-DQB1P01920 261 aa6.8□□□□□ -1.32
CDC42SE2-208ENST00000505065 TMEM225BP0DP42 221 aa6.8□□□□□ -1.32
CDC42SE2-208ENST00000505065 CEBPDP49716 269 aaPredicted RBP6.8□□□□□ -1.32
CDC42SE2-208ENST00000505065 BPIFB3P59826 476 aa6.8□□□□□ -1.32
CDC42SE2-208ENST00000505065 EIF4EBP1Q13541 118 aaPredicted RBP6.8□□□□□ -1.32
CDC42SE2-208ENST00000505065 HABP2Q14520 560 aaPredicted RBP6.8□□□□□ -1.32
CDC42SE2-208ENST00000505065 HES5Q5TA89 166 aa6.8□□□□□ -1.32
CDC42SE2-208ENST00000505065 CYB5R2Q6BCY4 276 aa6.8□□□□□ -1.32
CDC42SE2-208ENST00000505065 PEG10Q86TG7 708 aaKnown RBP6.8□□□□□ -1.32
CDC42SE2-208ENST00000505065 GAB2Q9UQC2 676 aa6.8□□□□□ -1.32
CDC42SE2-208ENST00000505065 V9GYH0 126 aa6.8□□□□□ -1.32
CDC42SE2-208ENST00000505065 A0A0B4J203 849 aa6.8□□□□□ -1.32
CDC42SE2-208ENST00000505065 SOCS1O15524 211 aa6.8□□□□□ -1.32
CDC42SE2-208ENST00000505065 EIF4EP06730 217 aaKnown RBP6.8□□□□□ -1.32
CDC42SE2-208ENST00000505065 SELLP14151 372 aa6.8□□□□□ -1.32
CDC42SE2-208ENST00000505065 HIST1H1DP16402 221 aaKnown RBP6.8□□□□□ -1.32
CDC42SE2-208ENST00000505065 MSMO1Q15800 293 aa6.8□□□□□ -1.32
CDC42SE2-208ENST00000505065 RAB12Q6IQ22 244 aa6.8□□□□□ -1.32
CDC42SE2-208ENST00000505065 CMTM4Q8IZR5 234 aa6.8□□□□□ -1.32
CDC42SE2-208ENST00000505065 OR56B1Q8NGI3 324 aa6.8□□□□□ -1.32
CDC42SE2-208ENST00000505065 OR5D18Q8NGL1 313 aa6.8□□□□□ -1.32
CDC42SE2-208ENST00000505065 C19orf12Q9NSK7 152 aa6.8□□□□□ -1.32
CDC42SE2-208ENST00000505065 SLC25A10Q9UBX3 287 aaPredicted RBP6.8□□□□□ -1.32
CDC42SE2-208ENST00000505065 HIVEP1P15822 2718 aa6.79□□□□□ -1.32
CDC42SE2-208ENST00000505065 SERPINE3A8MV23 424 aa6.79□□□□□ -1.32
CDC42SE2-208ENST00000505065 TFF1P04155 84 aa6.79□□□□□ -1.32
CDC42SE2-208ENST00000505065 HTD2P86397 168 aa6.79□□□□□ -1.32
CDC42SE2-208ENST00000505065 KLF17Q5JT82 389 aaPredicted RBP6.79□□□□□ -1.32
CDC42SE2-208ENST00000505065 TRAT1Q6PIZ9 186 aa6.79□□□□□ -1.32
CDC42SE2-208ENST00000505065 DYRK2Q92630 601 aa6.79□□□□□ -1.32
CDC42SE2-208ENST00000505065 RIMS4Q9H426 269 aaPredicted RBP6.79□□□□□ -1.32
CDC42SE2-208ENST00000505065 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP6.79□□□□□ -1.32
CDC42SE2-208ENST00000505065 SULT1C2O00338 296 aa6.79□□□□□ -1.32
CDC42SE2-208ENST00000505065 SNRPBP14678 240 aaKnown RBP6.79□□□□□ -1.32
CDC42SE2-208ENST00000505065 HACD4Q5VWC8 232 aa6.79□□□□□ -1.32
CDC42SE2-208ENST00000505065 JAGN1Q8N5M9 183 aa6.79□□□□□ -1.32
CDC42SE2-208ENST00000505065 ZNRF1Q8ND25 227 aa6.79□□□□□ -1.32
CDC42SE2-208ENST00000505065 Q9N2K0 584 aa6.79□□□□□ -1.32
CDC42SE2-208ENST00000505065 ZNF729A6NN14 1252 aaPredicted RBP6.79□□□□□ -1.32
CDC42SE2-208ENST00000505065 HOXB4P17483 251 aaPredicted RBP6.79□□□□□ -1.32
CDC42SE2-208ENST00000505065 SSBP1Q04837 148 aaKnown RBP6.79□□□□□ -1.32
CDC42SE2-208ENST00000505065 MOB1BQ7L9L4 216 aa6.79□□□□□ -1.32
CDC42SE2-208ENST00000505065 OR10K1Q8NGX5 313 aa6.79□□□□□ -1.32
CDC42SE2-208ENST00000505065 MMP27Q9H306 513 aa6.79□□□□□ -1.32
CDC42SE2-208ENST00000505065 GLS2Q9UI32 602 aa6.79□□□□□ -1.32
CDC42SE2-208ENST00000505065 ING4Q9UNL4 249 aa6.79□□□□□ -1.32
CDC42SE2-208ENST00000505065 MXRA5Q9NR99 2828 aa6.79□□□□□ -1.32
CDC42SE2-208ENST00000505065 LOC100506127A0A0U1RQW1 187 aa6.78□□□□□ -1.32
CDC42SE2-208ENST00000505065 IGLV1-47P01700 117 aa6.78□□□□□ -1.32
CDC42SE2-208ENST00000505065 SERPINB10P48595 397 aa6.78□□□□□ -1.32
CDC42SE2-208ENST00000505065 BAIAP2L2Q6UXY1 529 aa6.78□□□□□ -1.32
CDC42SE2-208ENST00000505065 HEPN1Q6WQI6 88 aa6.78□□□□□ -1.32
CDC42SE2-208ENST00000505065 TMEM186Q96B77 213 aa6.78□□□□□ -1.32
CDC42SE2-208ENST00000505065 RHBDL2Q9NX52 303 aa6.78□□□□□ -1.32
CDC42SE2-208ENST00000505065 ENSAO43768 121 aaKnown RBP6.78□□□□□ -1.32
CDC42SE2-208ENST00000505065 AVPP01185 164 aa6.78□□□□□ -1.32
CDC42SE2-208ENST00000505065 SERPINA2P20848 420 aa6.78□□□□□ -1.32
CDC42SE2-208ENST00000505065 ZNF660Q6AZW8 331 aaPredicted RBP6.78□□□□□ -1.32
CDC42SE2-208ENST00000505065 BTN2A1Q7KYR7 527 aa6.78□□□□□ -1.32
CDC42SE2-208ENST00000505065 GPX8Q8TED1 209 aa6.78□□□□□ -1.32
CDC42SE2-208ENST00000505065 CHST6Q9GZX3 395 aa6.78□□□□□ -1.32
CDC42SE2-208ENST00000505065 A6NLC8 198 aa6.78□□□□□ -1.32
CDC42SE2-208ENST00000505065 DEGS1O15121 323 aa6.78□□□□□ -1.32
CDC42SE2-208ENST00000505065 RPS2P15880 293 aaKnown RBP6.78□□□□□ -1.32
CDC42SE2-208ENST00000505065 ELK1P19419 428 aa6.78□□□□□ -1.32
CDC42SE2-208ENST00000505065 DYNLT3P51808 116 aa6.78□□□□□ -1.32
CDC42SE2-208ENST00000505065 ARL6IP1Q15041 203 aa6.78□□□□□ -1.32
CDC42SE2-208ENST00000505065 PDCD1Q15116 288 aa6.78□□□□□ -1.32
CDC42SE2-208ENST00000505065 LRRC10Q5BKY1 277 aa6.78□□□□□ -1.32
CDC42SE2-208ENST00000505065 SFRP4Q6FHJ7 346 aaPredicted RBP6.78□□□□□ -1.32
CDC42SE2-208ENST00000505065 C19orf18Q8NEA5 215 aa6.78□□□□□ -1.32
CDC42SE2-208ENST00000505065 AP3S1Q92572 193 aa6.78□□□□□ -1.32
CDC42SE2-208ENST00000505065 SDHCQ99643 169 aaPredicted RBP6.78□□□□□ -1.32
CDC42SE2-208ENST00000505065 SELENOIQ9C0D9 397 aa6.78□□□□□ -1.32
CDC42SE2-208ENST00000505065 AUNIPQ9H7T9 357 aa6.78□□□□□ -1.32
CDC42SE2-208ENST00000505065 AKIP1Q9NQ31 210 aa6.78□□□□□ -1.32
CDC42SE2-208ENST00000505065 AK3Q9UIJ7 227 aa6.78□□□□□ -1.32
CDC42SE2-208ENST00000505065 DAPK2Q9UIK4 370 aa6.78□□□□□ -1.32
CDC42SE2-208ENST00000505065 ODAMA1E959 279 aa6.78□□□□□ -1.32
CDC42SE2-208ENST00000505065 ADAM20O43506 726 aa6.78□□□□□ -1.32
CDC42SE2-208ENST00000505065 PAHP00439 452 aa6.78□□□□□ -1.32
CDC42SE2-208ENST00000505065 PRTN3P24158 256 aa6.78□□□□□ -1.32
CDC42SE2-208ENST00000505065 GDNFP39905 211 aa6.78□□□□□ -1.32
CDC42SE2-208ENST00000505065 CLDN12P56749 244 aa6.78□□□□□ -1.32
CDC42SE2-208ENST00000505065 ZNF273Q14593 569 aa6.78□□□□□ -1.32
CDC42SE2-208ENST00000505065 MFSD4AQ8N468 514 aa6.78□□□□□ -1.32
CDC42SE2-208ENST00000505065 OR6Q1Q8NGQ2 317 aa6.78□□□□□ -1.32
CDC42SE2-208ENST00000505065 BANF2Q9H503 90 aa6.78□□□□□ -1.32
CDC42SE2-208ENST00000505065 MMP26Q9NRE1 261 aa6.78□□□□□ -1.32
CDC42SE2-208ENST00000505065 LOC105371242A0A075B767 164 aa6.77□□□□□ -1.33
CDC42SE2-208ENST00000505065 KBTBD11-OT1A0A1B0GTJ5 212 aa6.77□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 68.7 ms