RNA–Protein interactions for RNA: ENST00000498048.1

PDZRN3-212, Transcript of PDZ domain containing ring finger 3, humanhuman

TSL 5

Gene PDZRN3, Length 590 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDZRN3-212ENST00000498048 ZNF436Q9C0F3 470 aaPredicted RBP6.83□□□□□ -1.32
PDZRN3-212ENST00000498048 ESRP2Q9H6T0 727 aaKnown RBP6.83□□□□□ -1.32
PDZRN3-212ENST00000498048 FN3KRPQ9HA64 309 aa6.83□□□□□ -1.32
PDZRN3-212ENST00000498048 C1orf123Q9NWV4 160 aa6.83□□□□□ -1.32
PDZRN3-212ENST00000498048 GLS2Q9UI32 602 aa6.83□□□□□ -1.32
PDZRN3-212ENST00000498048 DPRXA6NFQ7 191 aa6.82□□□□□ -1.32
PDZRN3-212ENST00000498048 OR5H14A6NHG9 310 aa6.82□□□□□ -1.32
PDZRN3-212ENST00000498048 CEACAM18A8MTB9 384 aa6.82□□□□□ -1.32
PDZRN3-212ENST00000498048 SLC33A1O00400 549 aaPredicted RBP6.82□□□□□ -1.32
PDZRN3-212ENST00000498048 LCE2BO14633 110 aa6.82□□□□□ -1.32
PDZRN3-212ENST00000498048 HS3ST1O14792 307 aa6.82□□□□□ -1.32
PDZRN3-212ENST00000498048 SH2D1BO14796 132 aa6.82□□□□□ -1.32
PDZRN3-212ENST00000498048 WNT9BO14905 357 aa6.82□□□□□ -1.32
PDZRN3-212ENST00000498048 FABP7O15540 132 aa6.82□□□□□ -1.32
PDZRN3-212ENST00000498048 NOS1APO75052 506 aaPredicted RBP6.82□□□□□ -1.32
PDZRN3-212ENST00000498048 KNG1P01042 644 aa6.82□□□□□ -1.32
PDZRN3-212ENST00000498048 GIPP09681 153 aaPredicted RBP6.82□□□□□ -1.32
PDZRN3-212ENST00000498048 AKR1C4P17516 323 aa6.82□□□□□ -1.32
PDZRN3-212ENST00000498048 EGR1P18146 543 aa6.82□□□□□ -1.32
PDZRN3-212ENST00000498048 ZNF81P51508 661 aa6.82□□□□□ -1.32
PDZRN3-212ENST00000498048 FXYD4P59646 89 aa6.82□□□□□ -1.32
PDZRN3-212ENST00000498048 TNFAIP6P98066 277 aaPredicted RBP6.82□□□□□ -1.32
PDZRN3-212ENST00000498048 SORDQ00796 357 aa6.82□□□□□ -1.32
PDZRN3-212ENST00000498048 ZNF146Q15072 292 aa6.82□□□□□ -1.32
PDZRN3-212ENST00000498048 AADACL3Q5VUY0 350 aa6.82□□□□□ -1.32
PDZRN3-212ENST00000498048 SHEQ5VZ18 495 aa6.82□□□□□ -1.32
PDZRN3-212ENST00000498048 Q6ZS49 121 aa6.82□□□□□ -1.32
PDZRN3-212ENST00000498048 MOGAT3Q86VF5 341 aa6.82□□□□□ -1.32
PDZRN3-212ENST00000498048 C12orf45Q8N5I9 185 aaPredicted RBP6.82□□□□□ -1.32
PDZRN3-212ENST00000498048 UXS1Q8NBZ7 420 aa6.82□□□□□ -1.32
PDZRN3-212ENST00000498048 ADAD2Q8NCV1 583 aaKnown RBP6.82□□□□□ -1.32
PDZRN3-212ENST00000498048 OR5T2Q8NGG2 359 aa6.82□□□□□ -1.32
PDZRN3-212ENST00000498048 OR10Z1Q8NGY1 313 aa6.82□□□□□ -1.32
PDZRN3-212ENST00000498048 CASTOR1Q8WTX7 329 aa6.82□□□□□ -1.32
PDZRN3-212ENST00000498048 TOMM40LQ969M1 308 aa6.82□□□□□ -1.32
PDZRN3-212ENST00000498048 CHIAQ9BZP6 476 aa6.82□□□□□ -1.32
PDZRN3-212ENST00000498048 ALX4Q9H161 411 aaPredicted RBP6.82□□□□□ -1.32
PDZRN3-212ENST00000498048 WDR13Q9H1Z4 485 aa6.82□□□□□ -1.32
PDZRN3-212ENST00000498048 RIMS4Q9H426 269 aaPredicted RBP6.82□□□□□ -1.32
PDZRN3-212ENST00000498048 Q9N2K0 584 aa6.82□□□□□ -1.32
PDZRN3-212ENST00000498048 DLL4Q9NR61 685 aa6.82□□□□□ -1.32
PDZRN3-212ENST00000498048 NPTNQ9Y639 398 aa6.82□□□□□ -1.32
PDZRN3-212ENST00000498048 NBASA2RRP1 2371 aa6.81□□□□□ -1.32
PDZRN3-212ENST00000498048 TRBV6-6A0A0A6YYG2 114 aa6.81□□□□□ -1.32
PDZRN3-212ENST00000498048 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP6.81□□□□□ -1.32
PDZRN3-212ENST00000498048 TMEM30CPA0ZSE6 113 aa6.81□□□□□ -1.32
PDZRN3-212ENST00000498048 C9orf170A2RU37 121 aa6.81□□□□□ -1.32
PDZRN3-212ENST00000498048 SRRM5B3KS81 715 aa6.81□□□□□ -1.32
PDZRN3-212ENST00000498048 H7C1Q1 480 aa6.81□□□□□ -1.32
PDZRN3-212ENST00000498048 M0R233 179 aa6.81□□□□□ -1.32
PDZRN3-212ENST00000498048 PTBP3O95758 552 aaKnown RBP6.81□□□□□ -1.32
PDZRN3-212ENST00000498048 IGHV1-46P01743 117 aa6.81□□□□□ -1.32
PDZRN3-212ENST00000498048 CTSDP07339 412 aaPredicted RBP6.81□□□□□ -1.32
PDZRN3-212ENST00000498048 CD3EP07766 207 aa6.81□□□□□ -1.32
PDZRN3-212ENST00000498048 ACAA1P09110 424 aaPredicted RBP6.81□□□□□ -1.32
PDZRN3-212ENST00000498048 GSTT2P0CG29 244 aa6.81□□□□□ -1.32
PDZRN3-212ENST00000498048 ZNF728P0DKX0 622 aa6.81□□□□□ -1.32
PDZRN3-212ENST00000498048 PI3P19957 117 aa6.81□□□□□ -1.32
PDZRN3-212ENST00000498048 ZBTB25P24278 435 aa6.81□□□□□ -1.32
PDZRN3-212ENST00000498048 DNASE1P24855 282 aa6.81□□□□□ -1.32
PDZRN3-212ENST00000498048 ERP29P30040 261 aaKnown RBP6.81□□□□□ -1.32
PDZRN3-212ENST00000498048 RAP2BP61225 183 aa6.81□□□□□ -1.32
PDZRN3-212ENST00000498048 IL13RA1P78552 427 aa6.81□□□□□ -1.32
PDZRN3-212ENST00000498048 SRSF7Q16629 238 aaKnown RBP eCLIP6.81□□□□□ -1.32
PDZRN3-212ENST00000498048 SWI5Q1ZZU3 235 aa6.81□□□□□ -1.32
PDZRN3-212ENST00000498048 ABCA11PQ4W5N1 156 aa6.81□□□□□ -1.32
PDZRN3-212ENST00000498048 NCMAPQ5T1S8 102 aa6.81□□□□□ -1.32
PDZRN3-212ENST00000498048 LPCAT3Q6P1A2 487 aa6.81□□□□□ -1.32
PDZRN3-212ENST00000498048 PCSK4Q6UW60 755 aa6.81□□□□□ -1.32
PDZRN3-212ENST00000498048 NLRC3Q7RTR2 1065 aa6.81□□□□□ -1.32
PDZRN3-212ENST00000498048 C11orf53Q8IXP5 236 aa6.81□□□□□ -1.32
PDZRN3-212ENST00000498048 ASCC1Q8N9N2 400 aaKnown RBP6.81□□□□□ -1.32
PDZRN3-212ENST00000498048 BOLLQ8N9W6 283 aaKnown RBP6.81□□□□□ -1.32
PDZRN3-212ENST00000498048 OR5M8Q8NGP6 311 aa6.81□□□□□ -1.32
PDZRN3-212ENST00000498048 PLPPR1Q8TBJ4 325 aa6.81□□□□□ -1.32
PDZRN3-212ENST00000498048 CA5BP1Q8WTZ4 195 aa6.81□□□□□ -1.32
PDZRN3-212ENST00000498048 TMEM230Q96A57 120 aa6.81□□□□□ -1.32
PDZRN3-212ENST00000498048 MOB3AQ96BX8 217 aa6.81□□□□□ -1.32
PDZRN3-212ENST00000498048 PLPPR2Q96GM1 343 aa6.81□□□□□ -1.32
PDZRN3-212ENST00000498048 ZNF486Q96H40 463 aaPredicted RBP6.81□□□□□ -1.32
PDZRN3-212ENST00000498048 WFIKKN1Q96NZ8 548 aa6.81□□□□□ -1.32
PDZRN3-212ENST00000498048 PHB2Q99623 299 aa6.81□□□□□ -1.32
PDZRN3-212ENST00000498048 CABLES2Q9BTV7 478 aa6.81□□□□□ -1.32
PDZRN3-212ENST00000498048 TRAF4Q9BUZ4 470 aaPredicted RBP6.81□□□□□ -1.32
PDZRN3-212ENST00000498048 DNTTIP1Q9H147 329 aa6.81□□□□□ -1.32
PDZRN3-212ENST00000498048 CLEC4MQ9H2X3 399 aaPredicted RBP6.81□□□□□ -1.32
PDZRN3-212ENST00000498048 C5orf66Q9H5L9 145 aa6.81□□□□□ -1.32
PDZRN3-212ENST00000498048 TMEM165Q9HC07 324 aa6.81□□□□□ -1.32
PDZRN3-212ENST00000498048 DYNLRB1Q9NP97 96 aa6.81□□□□□ -1.32
PDZRN3-212ENST00000498048 DNAJB11Q9UBS4 358 aa6.81□□□□□ -1.32
PDZRN3-212ENST00000498048 NDRG3Q9UGV2 375 aa6.81□□□□□ -1.32
PDZRN3-212ENST00000498048 MGAT4AQ9UM21 535 aa6.81□□□□□ -1.32
PDZRN3-212ENST00000498048 GPR132Q9UNW8 380 aa6.81□□□□□ -1.32
PDZRN3-212ENST00000498048 TRDCB7Z8K6 153 aa6.8□□□□□ -1.32
PDZRN3-212ENST00000498048 CCSO14618 274 aa6.8□□□□□ -1.32
PDZRN3-212ENST00000498048 BET1O15155 118 aa6.8□□□□□ -1.32
PDZRN3-212ENST00000498048 SLC22A5O76082 557 aa6.8□□□□□ -1.32
PDZRN3-212ENST00000498048 SFT2D2O95562 160 aa6.8□□□□□ -1.32
PDZRN3-212ENST00000498048 DUS4LO95620 317 aaKnown RBP6.8□□□□□ -1.32
PDZRN3-212ENST00000498048 DIRAS3O95661 229 aa6.8□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms