RNA–Protein interactions for RNA: ENST00000496549.5

CRNKL1-205, Transcript of crooked neck pre-mRNA splicing factor 1, humanhuman

TSL 1 (best)

Gene CRNKL1, Length 4,093 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRNKL1-205ENST00000496549 PRDX4Q13162 271 aa7.18□□□□□ -1.26
CRNKL1-205ENST00000496549 FAM71F2Q6NXP2 309 aa7.18□□□□□ -1.26
CRNKL1-205ENST00000496549 C22orf39Q6P5X5 142 aa7.18□□□□□ -1.26
CRNKL1-205ENST00000496549 TMEM252Q8N6L7 170 aa7.18□□□□□ -1.26
CRNKL1-205ENST00000496549 OR14C36Q8NHC7 312 aa7.18□□□□□ -1.26
CRNKL1-205ENST00000496549 TMEM56Q96MV1 263 aa7.18□□□□□ -1.26
CRNKL1-205ENST00000496549 PAAF1Q9BRP4 392 aa7.18□□□□□ -1.26
CRNKL1-205ENST00000496549 TIMM29Q9BSF4 260 aa7.18□□□□□ -1.26
CRNKL1-205ENST00000496549 ZNF319Q9P2F9 582 aa7.18□□□□□ -1.26
CRNKL1-205ENST00000496549 R4GMQ9 66 aa7.18□□□□□ -1.26
CRNKL1-205ENST00000496549 TMEM56-RWDD3S4R434 201 aa7.18□□□□□ -1.26
CRNKL1-205ENST00000496549 A0A0B4J2E0 115 aa7.18□□□□□ -1.26
CRNKL1-205ENST00000496549 A0A1B0GX12 115 aa7.18□□□□□ -1.26
CRNKL1-205ENST00000496549 SLC22A20A6NK97 555 aa7.18□□□□□ -1.26
CRNKL1-205ENST00000496549 PFN1P07737 140 aaKnown RBP7.18□□□□□ -1.26
CRNKL1-205ENST00000496549 FSTP19883 344 aa7.18□□□□□ -1.26
CRNKL1-205ENST00000496549 IL3RAP26951 378 aa7.18□□□□□ -1.26
CRNKL1-205ENST00000496549 CD1BP29016 333 aa7.18□□□□□ -1.26
CRNKL1-205ENST00000496549 MDH2P40926 338 aaKnown RBP7.18□□□□□ -1.26
CRNKL1-205ENST00000496549 GPM6AP51674 278 aa7.18□□□□□ -1.26
CRNKL1-205ENST00000496549 MRPS6P82932 125 aaKnown RBP7.18□□□□□ -1.26
CRNKL1-205ENST00000496549 KRTCAP3Q53RY4 240 aa7.18□□□□□ -1.26
CRNKL1-205ENST00000496549 DHRS13Q6UX07 377 aa7.18□□□□□ -1.26
CRNKL1-205ENST00000496549 LYZL2Q7Z4W2 148 aa7.18□□□□□ -1.26
CRNKL1-205ENST00000496549 CDC20BQ86Y33 519 aa7.18□□□□□ -1.26
CRNKL1-205ENST00000496549 BPIFA4PQ86YQ2 179 aa7.18□□□□□ -1.26
CRNKL1-205ENST00000496549 OR4N5Q8IXE1 308 aa7.18□□□□□ -1.26
CRNKL1-205ENST00000496549 TMEM251Q8N6I4 163 aa7.18□□□□□ -1.26
CRNKL1-205ENST00000496549 OR13G1Q8NGZ3 307 aa7.18□□□□□ -1.26
CRNKL1-205ENST00000496549 ARHGAP5-AS1Q96IT6 56 aa7.18□□□□□ -1.26
CRNKL1-205ENST00000496549 ZNF681Q96N22 645 aa7.18□□□□□ -1.26
CRNKL1-205ENST00000496549 PRSS27Q9BQR3 290 aa7.18□□□□□ -1.26
CRNKL1-205ENST00000496549 NRN1Q9NPD7 142 aa7.18□□□□□ -1.26
CRNKL1-205ENST00000496549 TMEM202A6NGA9 273 aa7.18□□□□□ -1.26
CRNKL1-205ENST00000496549 FABP2P12104 132 aa7.18□□□□□ -1.26
CRNKL1-205ENST00000496549 IER3P46695 156 aa7.18□□□□□ -1.26
CRNKL1-205ENST00000496549 RPL23P62829 140 aaKnown RBP7.18□□□□□ -1.26
CRNKL1-205ENST00000496549 MESP2Q0VG99 397 aa7.18□□□□□ -1.26
CRNKL1-205ENST00000496549 RTP5Q14D33 572 aa7.18□□□□□ -1.26
CRNKL1-205ENST00000496549 RFLNAQ6ZTI6 216 aa7.18□□□□□ -1.26
CRNKL1-205ENST00000496549 FAM57BQ71RH2 274 aa7.18□□□□□ -1.26
CRNKL1-205ENST00000496549 MARCH3Q86UD3 253 aa7.18□□□□□ -1.26
CRNKL1-205ENST00000496549 LILRA3Q8N6C8 439 aaPredicted RBP7.18□□□□□ -1.26
CRNKL1-205ENST00000496549 CNRIP1Q96F85 164 aaPredicted RBP7.18□□□□□ -1.26
CRNKL1-205ENST00000496549 TSPAN32Q96QS1 320 aa7.18□□□□□ -1.26
CRNKL1-205ENST00000496549 HEATR5AQ86XA9 2040 aa7.18□□□□□ -1.26
CRNKL1-205ENST00000496549 GREB1LQ9C091 1923 aaPredicted RBP7.18□□□□□ -1.26
CRNKL1-205ENST00000496549 TMEM265A0A087WTH1 108 aa7.17□□□□□ -1.26
CRNKL1-205ENST00000496549 ZNF732B4DXR9 585 aa7.17□□□□□ -1.26
CRNKL1-205ENST00000496549 H0Y8G0 127 aa7.17□□□□□ -1.26
CRNKL1-205ENST00000496549 SLC17A3O00476 420 aa7.17□□□□□ -1.26
CRNKL1-205ENST00000496549 RAMP3O60896 148 aa7.17□□□□□ -1.26
CRNKL1-205ENST00000496549 NXPH3O95157 252 aa7.17□□□□□ -1.26
CRNKL1-205ENST00000496549 F11P03951 625 aa7.17□□□□□ -1.26
CRNKL1-205ENST00000496549 COX5AP20674 150 aa7.17□□□□□ -1.26
CRNKL1-205ENST00000496549 OTX1P32242 354 aaPredicted RBP7.17□□□□□ -1.26
CRNKL1-205ENST00000496549 BCL6P41182 706 aa7.17□□□□□ -1.26
CRNKL1-205ENST00000496549 FOXL2P58012 376 aa7.17□□□□□ -1.26
CRNKL1-205ENST00000496549 INSM1Q01101 510 aaPredicted RBP7.17□□□□□ -1.26
CRNKL1-205ENST00000496549 AESQ08117 197 aa7.17□□□□□ -1.26
CRNKL1-205ENST00000496549 ZNF808Q8N4W9 903 aaPredicted RBP7.17□□□□□ -1.26
CRNKL1-205ENST00000496549 RERGQ96A58 199 aaPredicted RBP7.17□□□□□ -1.26
CRNKL1-205ENST00000496549 ZNF703Q9H7S9 590 aaPredicted RBP7.17□□□□□ -1.26
CRNKL1-205ENST00000496549 CLCF1Q9UBD9 225 aa7.17□□□□□ -1.26
CRNKL1-205ENST00000496549 LOC285556D6RIA3 1793 aa7.17□□□□□ -1.26
CRNKL1-205ENST00000496549 IGLV3-16A0A075B6K0 115 aa7.17□□□□□ -1.26
CRNKL1-205ENST00000496549 TRAV9-2A0A087WT02 112 aa7.17□□□□□ -1.26
CRNKL1-205ENST00000496549 GJB5O95377 273 aa7.17□□□□□ -1.26
CRNKL1-205ENST00000496549 CNIH1O95406 144 aa7.17□□□□□ -1.26
CRNKL1-205ENST00000496549 EPPINO95925 133 aa7.17□□□□□ -1.26
CRNKL1-205ENST00000496549 PTGER4P35408 488 aa7.17□□□□□ -1.26
CRNKL1-205ENST00000496549 SERF2P84101 59 aa7.17□□□□□ -1.26
CRNKL1-205ENST00000496549 EIF4EBP2Q13542 120 aaPredicted RBP7.17□□□□□ -1.26
CRNKL1-205ENST00000496549 PRSS53Q2L4Q9 553 aa7.17□□□□□ -1.26
CRNKL1-205ENST00000496549 MORN2Q502X0 79 aa7.17□□□□□ -1.26
CRNKL1-205ENST00000496549 C9orf50Q5SZB4 431 aa7.17□□□□□ -1.26
CRNKL1-205ENST00000496549 C1orf140Q5VVS0 124 aa7.17□□□□□ -1.26
CRNKL1-205ENST00000496549 LHFPL4Q7Z7J7 247 aa7.17□□□□□ -1.26
CRNKL1-205ENST00000496549 KLHDC9Q8NEP7 349 aa7.17□□□□□ -1.26
CRNKL1-205ENST00000496549 DOK4Q8TEW6 326 aa7.17□□□□□ -1.26
CRNKL1-205ENST00000496549 OR6C1Q96RD1 312 aa7.17□□□□□ -1.26
CRNKL1-205ENST00000496549 ABHD14AQ9BUJ0 271 aa7.17□□□□□ -1.26
CRNKL1-205ENST00000496549 IL21Q9HBE4 155 aa7.17□□□□□ -1.26
CRNKL1-205ENST00000496549 LOC105371242A0A075B767 164 aa7.17□□□□□ -1.26
CRNKL1-205ENST00000496549 FBLL1A6NHQ2 334 aaKnown RBP7.17□□□□□ -1.26
CRNKL1-205ENST00000496549 B4GALT2O60909 372 aa7.17□□□□□ -1.26
CRNKL1-205ENST00000496549 STC2O76061 302 aa7.17□□□□□ -1.26
CRNKL1-205ENST00000496549 VSIG8P0DPA2 414 aa7.17□□□□□ -1.26
CRNKL1-205ENST00000496549 RPEL1Q2QD12 228 aa7.17□□□□□ -1.26
CRNKL1-205ENST00000496549 C1orf100Q5SVJ3 147 aa7.17□□□□□ -1.26
CRNKL1-205ENST00000496549 C1QL3Q5VWW1 255 aa7.17□□□□□ -1.26
CRNKL1-205ENST00000496549 LINC01465Q8N7H1 131 aa7.17□□□□□ -1.26
CRNKL1-205ENST00000496549 OR5A1Q8NGJ0 315 aa7.17□□□□□ -1.26
CRNKL1-205ENST00000496549 TMEM230Q96A57 120 aa7.17□□□□□ -1.26
CRNKL1-205ENST00000496549 C16orf70Q9BSU1 422 aa7.17□□□□□ -1.26
CRNKL1-205ENST00000496549 PKIBQ9C010 78 aa7.17□□□□□ -1.26
CRNKL1-205ENST00000496549 WFDC1Q9HC57 220 aa7.17□□□□□ -1.26
CRNKL1-205ENST00000496549 JKAMPQ9P055 326 aa7.17□□□□□ -1.26
CRNKL1-205ENST00000496549 ICAM5Q9UMF0 924 aa7.17□□□□□ -1.26
CRNKL1-205ENST00000496549 LTBP1Q14766 1721 aa7.17□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms