RNA–Protein interactions for RNA: ENST00000495899.1

MRPL55-233, Transcript of mitochondrial ribosomal protein L55, human

TSL 2

Gene MRPL55, Length 790 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
MRPL55-233	ENST00000495899	MRPS24	Q96EL2	167 aa	Known RBP	10.09	□□□□□ -0.79
MRPL55-233	ENST00000495899	DUX5	Q96PT3	197 aa		10.09	□□□□□ -0.79
MRPL55-233	ENST00000495899	NR1H4	Q96RI1	486 aa	Predicted RBP	10.09	□□□□□ -0.79
MRPL55-233	ENST00000495899	UQCC2	Q9BRT2	126 aa		10.09	□□□□□ -0.79
MRPL55-233	ENST00000495899	TMED9	Q9BVK6	235 aa		10.09	□□□□□ -0.79
MRPL55-233	ENST00000495899	YTHDF1	Q9BYJ9	559 aa	Known RBP	10.09	□□□□□ -0.79
MRPL55-233	ENST00000495899	DPAGT1	Q9H3H5	408 aa		10.09	□□□□□ -0.79
MRPL55-233	ENST00000495899	GAL3ST2	Q9H3Q3	398 aa		10.09	□□□□□ -0.79
MRPL55-233	ENST00000495899	TCF7L1	Q9HCS4	588 aa		10.09	□□□□□ -0.79
MRPL55-233	ENST00000495899	TAS2R3	Q9NYW6	316 aa		10.09	□□□□□ -0.79
MRPL55-233	ENST00000495899	ST3GAL6	Q9Y274	331 aa		10.09	□□□□□ -0.79
MRPL55-233	ENST00000495899	TRGV10	A0A0A0MS01	117 aa		10.08	□□□□□ -0.8
MRPL55-233	ENST00000495899	MAGEA13P	A6NCF6	341 aa		10.08	□□□□□ -0.8
MRPL55-233	ENST00000495899	PAH	P00439	452 aa		10.08	□□□□□ -0.8
MRPL55-233	ENST00000495899	PF4	P02776	101 aa		10.08	□□□□□ -0.8
MRPL55-233	ENST00000495899	MAS1	P04201	325 aa		10.08	□□□□□ -0.8
MRPL55-233	ENST00000495899	HSMCR30	P0CW71	290 aa		10.08	□□□□□ -0.8
MRPL55-233	ENST00000495899	IGHV1-8	P0DP01	117 aa		10.08	□□□□□ -0.8
MRPL55-233	ENST00000495899	HKR1	P10072	659 aa		10.08	□□□□□ -0.8
MRPL55-233	ENST00000495899	CPE	P16870	476 aa		10.08	□□□□□ -0.8
MRPL55-233	ENST00000495899	DLX1	P56177	255 aa		10.08	□□□□□ -0.8
MRPL55-233	ENST00000495899	RBM11	P57052	281 aa	Known RBP	10.08	□□□□□ -0.8
MRPL55-233	ENST00000495899	GABARAPL2	P60520	117 aa		10.08	□□□□□ -0.8
MRPL55-233	ENST00000495899	AES	Q08117	197 aa		10.08	□□□□□ -0.8
MRPL55-233	ENST00000495899	FOXL1	Q12952	345 aa		10.08	□□□□□ -0.8
MRPL55-233	ENST00000495899	TBCE	Q15813	527 aa	Predicted RBP	10.08	□□□□□ -0.8
MRPL55-233	ENST00000495899	LIPK	Q5VXJ0	399 aa		10.08	□□□□□ -0.8
MRPL55-233	ENST00000495899	TCF23	Q7RTU1	214 aa		10.08	□□□□□ -0.8
MRPL55-233	ENST00000495899	CEACAM19	Q7Z692	300 aa		10.08	□□□□□ -0.8
MRPL55-233	ENST00000495899	JAGN1	Q8N5M9	183 aa		10.08	□□□□□ -0.8
MRPL55-233	ENST00000495899	TPRX1	Q8N7U7	411 aa		10.08	□□□□□ -0.8
MRPL55-233	ENST00000495899	BEND2	Q8NDZ0	799 aa		10.08	□□□□□ -0.8
MRPL55-233	ENST00000495899	OR11H6	Q8NGC7	330 aa		10.08	□□□□□ -0.8
MRPL55-233	ENST00000495899	OR10K1	Q8NGX5	313 aa		10.08	□□□□□ -0.8
MRPL55-233	ENST00000495899	FOXRED1	Q96CU9	486 aa	Predicted RBP	10.08	□□□□□ -0.8
MRPL55-233	ENST00000495899	MGLL	Q99685	303 aa		10.08	□□□□□ -0.8
MRPL55-233	ENST00000495899	BARHL1	Q9BZE3	327 aa		10.08	□□□□□ -0.8
MRPL55-233	ENST00000495899	PPA2	Q9H2U2	334 aa		10.08	□□□□□ -0.8
MRPL55-233	ENST00000495899	ZNRD1	Q9P1U0	126 aa		10.08	□□□□□ -0.8
MRPL55-233	ENST00000495899	GHRL	Q9UBU3	117 aa		10.08	□□□□□ -0.8
MRPL55-233	ENST00000495899	MRPS28	Q9Y2Q9	187 aa	Known RBP	10.08	□□□□□ -0.8
MRPL55-233	ENST00000495899	TRAV24	A0A0B4J272	114 aa		10.07	□□□□□ -0.8
MRPL55-233	ENST00000495899		A0A1W2PRD5	423 aa		10.07	□□□□□ -0.8
MRPL55-233	ENST00000495899		A0A1W2PRF3	423 aa		10.07	□□□□□ -0.8
MRPL55-233	ENST00000495899		A0A1W2PRM7	423 aa		10.07	□□□□□ -0.8
MRPL55-233	ENST00000495899	ODAM	A1E959	279 aa		10.07	□□□□□ -0.8
MRPL55-233	ENST00000495899	UCHL1	P09936	223 aa		10.07	□□□□□ -0.8
MRPL55-233	ENST00000495899	CD37	P11049	281 aa		10.07	□□□□□ -0.8
MRPL55-233	ENST00000495899	SRM	P19623	302 aa		10.07	□□□□□ -0.8
MRPL55-233	ENST00000495899	LOR	P23490	312 aa	Predicted RBP	10.07	□□□□□ -0.8
MRPL55-233	ENST00000495899	GLIPR1	P48060	266 aa		10.07	□□□□□ -0.8
MRPL55-233	ENST00000495899	LGALS4	P56470	323 aa		10.07	□□□□□ -0.8
MRPL55-233	ENST00000495899	PRB3	Q04118	309 aa	Predicted RBP	10.07	□□□□□ -0.8
MRPL55-233	ENST00000495899	AANAT	Q16613	207 aa		10.07	□□□□□ -0.8
MRPL55-233	ENST00000495899	MPV17L	Q2QL34	196 aa		10.07	□□□□□ -0.8
MRPL55-233	ENST00000495899	PIGY	Q3MUY2	71 aa		10.07	□□□□□ -0.8
MRPL55-233	ENST00000495899	SLC22A6	Q4U2R8	563 aa		10.07	□□□□□ -0.8
MRPL55-233	ENST00000495899	PAN3	Q58A45	887 aa	Known RBP	10.07	□□□□□ -0.8
MRPL55-233	ENST00000495899	KRBOX4	Q5JUW0	171 aa		10.07	□□□□□ -0.8
MRPL55-233	ENST00000495899	OR52W1	Q6IF63	320 aa		10.07	□□□□□ -0.8
MRPL55-233	ENST00000495899	GLIPR1L1	Q6UWM5	242 aa		10.07	□□□□□ -0.8
MRPL55-233	ENST00000495899	C12orf54	Q6X4T0	127 aa		10.07	□□□□□ -0.8
MRPL55-233	ENST00000495899	C8orf86	Q6ZUL3	223 aa		10.07	□□□□□ -0.8
MRPL55-233	ENST00000495899	ZNF367	Q7RTV3	350 aa		10.07	□□□□□ -0.8
MRPL55-233	ENST00000495899	TRAPPC6B	Q86SZ2	158 aa		10.07	□□□□□ -0.8
MRPL55-233	ENST00000495899	PNKD	Q8N490	385 aa		10.07	□□□□□ -0.8
MRPL55-233	ENST00000495899	ZNF565	Q8N9K5	539 aa		10.07	□□□□□ -0.8
MRPL55-233	ENST00000495899	DYRK2	Q92630	601 aa		10.07	□□□□□ -0.8
MRPL55-233	ENST00000495899	MUL1	Q969V5	352 aa		10.07	□□□□□ -0.8
MRPL55-233	ENST00000495899	NKX3-1	Q99801	234 aa	Predicted RBP	10.07	□□□□□ -0.8
MRPL55-233	ENST00000495899	SLITRK2	Q9H156	845 aa		10.07	□□□□□ -0.8
MRPL55-233	ENST00000495899	MEGF9	Q9H1U4	602 aa		10.07	□□□□□ -0.8
MRPL55-233	ENST00000495899	ACOT13	Q9NPJ3	140 aa		10.07	□□□□□ -0.8
MRPL55-233	ENST00000495899	OR6C3	Q9NZP0	311 aa		10.07	□□□□□ -0.8
MRPL55-233	ENST00000495899	SESN1	Q9Y6P5	492 aa		10.07	□□□□□ -0.8
MRPL55-233	ENST00000495899	DNHD1	Q96M86	4753 aa		10.07	□□□□□ -0.8
MRPL55-233	ENST00000495899	BTBD17	A6NE02	478 aa		10.06	□□□□□ -0.8
MRPL55-233	ENST00000495899	FAM90A8P	A6NJQ4	464 aa		10.06	□□□□□ -0.8
MRPL55-233	ENST00000495899		H3BUI4	141 aa		10.06	□□□□□ -0.8
MRPL55-233	ENST00000495899	ARL6IP5	O75915	188 aa		10.06	□□□□□ -0.8
MRPL55-233	ENST00000495899	IGHV4-59	P01825	116 aa		10.06	□□□□□ -0.8
MRPL55-233	ENST00000495899	UBB	P0CG47	229 aa		10.06	□□□□□ -0.8
MRPL55-233	ENST00000495899	SERPINA2	P20848	420 aa		10.06	□□□□□ -0.8
MRPL55-233	ENST00000495899	MAP2K4	P45985	399 aa		10.06	□□□□□ -0.8
MRPL55-233	ENST00000495899	GP2	P55259	537 aa	Known RBP	10.06	□□□□□ -0.8
MRPL55-233	ENST00000495899	INSL4	Q14641	139 aa		10.06	□□□□□ -0.8
MRPL55-233	ENST00000495899	HSD17B12	Q53GQ0	312 aa		10.06	□□□□□ -0.8
MRPL55-233	ENST00000495899	GLT8D1	Q68CQ7	371 aa		10.06	□□□□□ -0.8
MRPL55-233	ENST00000495899	HEPN1	Q6WQI6	88 aa		10.06	□□□□□ -0.8
MRPL55-233	ENST00000495899	ZNF782	Q6ZMW2	699 aa	Predicted RBP	10.06	□□□□□ -0.8
MRPL55-233	ENST00000495899	LRRTM1	Q86UE6	522 aa		10.06	□□□□□ -0.8
MRPL55-233	ENST00000495899	OR5R1	Q8NH85	324 aa		10.06	□□□□□ -0.8
MRPL55-233	ENST00000495899	TMEM203	Q969S6	136 aa		10.06	□□□□□ -0.8
MRPL55-233	ENST00000495899	COQ2	Q96H96	371 aa		10.06	□□□□□ -0.8
MRPL55-233	ENST00000495899	AJUBA	Q96IF1	538 aa		10.06	□□□□□ -0.8
MRPL55-233	ENST00000495899	CHIA	Q9BZP6	476 aa		10.06	□□□□□ -0.8
MRPL55-233	ENST00000495899	TMEM133	Q9H2Q1	129 aa		10.06	□□□□□ -0.8
MRPL55-233	ENST00000495899	SPACA1	Q9HBV2	294 aa		10.06	□□□□□ -0.8
MRPL55-233	ENST00000495899	TBL2	Q9Y4P3	447 aa	Known RBP	10.06	□□□□□ -0.8
MRPL55-233	ENST00000495899	LRRC42	Q9Y546	428 aa		10.06	□□□□□ -0.8

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