RNA–Protein interactions for RNA: ENST00000494612.1

SMC4-224, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 3

Gene SMC4, Length 622 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-224ENST00000494612 AKAP13Q12802 2813 aa2.42□□□□□ -2.02
SMC4-224ENST00000494612 SPAG17Q6Q759 2223 aa2.42□□□□□ -2.02
SMC4-224ENST00000494612 NUP205Q92621 2012 aa2.42□□□□□ -2.02
SMC4-224ENST00000494612 ITPR1Q14643 2758 aa2.42□□□□□ -2.02
SMC4-224ENST00000494612 ANKRD11Q6UB99 2663 aaPredicted RBP2.42□□□□□ -2.02
SMC4-224ENST00000494612 THADAQ6YHU6 1953 aa2.41□□□□□ -2.02
SMC4-224ENST00000494612 SHROOM3Q8TF72 1996 aa2.41□□□□□ -2.02
SMC4-224ENST00000494612 NUP210Q8TEM1 1887 aaPredicted RBP2.41□□□□□ -2.02
SMC4-224ENST00000494612 A0A0A6YYD5 115 aa2.41□□□□□ -2.02
SMC4-224ENST00000494612 A0A1W2PRF3 423 aa2.41□□□□□ -2.02
SMC4-224ENST00000494612 A0A1W2PRM7 423 aa2.41□□□□□ -2.02
SMC4-224ENST00000494612 HACD1B0YJ81 288 aa2.41□□□□□ -2.02
SMC4-224ENST00000494612 I3L4J1 428 aa2.41□□□□□ -2.02
SMC4-224ENST00000494612 RFXANKO14593 260 aa2.41□□□□□ -2.02
SMC4-224ENST00000494612 TRBV12-3P01733 135 aa2.41□□□□□ -2.02
SMC4-224ENST00000494612 CD28P10747 220 aa2.41□□□□□ -2.02
SMC4-224ENST00000494612 THRAP10827 490 aa2.41□□□□□ -2.02
SMC4-224ENST00000494612 CCL2P13500 99 aa2.41□□□□□ -2.02
SMC4-224ENST00000494612 APLNRP35414 380 aa2.41□□□□□ -2.02
SMC4-224ENST00000494612 IFITM3Q01628 133 aa2.41□□□□□ -2.02
SMC4-224ENST00000494612 NAB1Q13506 487 aa2.41□□□□□ -2.02
SMC4-224ENST00000494612 C5orf64Q2M2E5 130 aa2.41□□□□□ -2.02
SMC4-224ENST00000494612 C6orf99Q4VX62 202 aa2.41□□□□□ -2.02
SMC4-224ENST00000494612 KRTAP13-2Q52LG2 175 aa2.41□□□□□ -2.02
SMC4-224ENST00000494612 KLHL12Q53G59 568 aa2.41□□□□□ -2.02
SMC4-224ENST00000494612 KDM4DQ6B0I6 523 aa2.41□□□□□ -2.02
SMC4-224ENST00000494612 GUSBP11Q6P575 273 aa2.41□□□□□ -2.02
SMC4-224ENST00000494612 ERICH5Q6P6B1 374 aa2.41□□□□□ -2.02
SMC4-224ENST00000494612 SLC35D2Q76EJ3 337 aa2.41□□□□□ -2.02
SMC4-224ENST00000494612 PID1Q7Z2X4 250 aa2.41□□□□□ -2.02
SMC4-224ENST00000494612 DRAM1Q8N682 238 aa2.41□□□□□ -2.02
SMC4-224ENST00000494612 WDR31Q8NA23 367 aa2.41□□□□□ -2.02
SMC4-224ENST00000494612 CCDC12Q8WUD4 166 aaPredicted RBP2.41□□□□□ -2.02
SMC4-224ENST00000494612 BAALCQ8WXS3 180 aa2.41□□□□□ -2.02
SMC4-224ENST00000494612 TFGQ92734 400 aaPredicted RBP2.41□□□□□ -2.02
SMC4-224ENST00000494612 GPR82Q96P67 336 aa2.41□□□□□ -2.02
SMC4-224ENST00000494612 CTRCQ99895 268 aa2.41□□□□□ -2.02
SMC4-224ENST00000494612 RAB1BQ9H0U4 201 aa2.41□□□□□ -2.02
SMC4-224ENST00000494612 KIR3DX1Q9H7L2 352 aa2.41□□□□□ -2.02
SMC4-224ENST00000494612 ANKHQ9HCJ1 492 aa2.41□□□□□ -2.02
SMC4-224ENST00000494612 MARCOQ9UEW3 520 aaPredicted RBP2.41□□□□□ -2.02
SMC4-224ENST00000494612 LRRC42Q9Y546 428 aa2.41□□□□□ -2.02
SMC4-224ENST00000494612 FASNP49327 2511 aaKnown RBP2.41□□□□□ -2.02
SMC4-224ENST00000494612 CEACAM18A8MTB9 384 aa2.4□□□□□ -2.03
SMC4-224ENST00000494612 H3BN98 237 aa2.4□□□□□ -2.03
SMC4-224ENST00000494612 TAAR5O14804 337 aa2.4□□□□□ -2.03
SMC4-224ENST00000494612 CETN3O15182 167 aa2.4□□□□□ -2.03
SMC4-224ENST00000494612 CTNSO60931 367 aa2.4□□□□□ -2.03
SMC4-224ENST00000494612 HLA-EP13747 358 aa2.4□□□□□ -2.03
SMC4-224ENST00000494612 CELP19835 753 aa2.4□□□□□ -2.03
SMC4-224ENST00000494612 CSKP41240 450 aa2.4□□□□□ -2.03
SMC4-224ENST00000494612 UBE2E1P51965 193 aa2.4□□□□□ -2.03
SMC4-224ENST00000494612 CLDN6P56747 220 aa2.4□□□□□ -2.03
SMC4-224ENST00000494612 KRTAP10-10P60014 251 aa2.4□□□□□ -2.03
SMC4-224ENST00000494612 XRCC4Q13426 336 aa2.4□□□□□ -2.03
SMC4-224ENST00000494612 OR1Q1Q15612 314 aa2.4□□□□□ -2.03
SMC4-224ENST00000494612 NDUFAF6Q330K2 333 aa2.4□□□□□ -2.03
SMC4-224ENST00000494612 TMEM236Q5W0B7 351 aa2.4□□□□□ -2.03
SMC4-224ENST00000494612 TMPRSS11AQ6ZMR5 421 aa2.4□□□□□ -2.03
SMC4-224ENST00000494612 OR2W3Q7Z3T1 314 aa2.4□□□□□ -2.03
SMC4-224ENST00000494612 ZBTB8OSQ8IWT0 167 aa2.4□□□□□ -2.03
SMC4-224ENST00000494612 ZNF101Q8IZC7 436 aa2.4□□□□□ -2.03
SMC4-224ENST00000494612 DEFB119Q8N690 84 aa2.4□□□□□ -2.03
SMC4-224ENST00000494612 C17orf50Q8WW18 174 aa2.4□□□□□ -2.03
SMC4-224ENST00000494612 WDR34Q96EX3 536 aa2.4□□□□□ -2.03
SMC4-224ENST00000494612 UBE2E2Q96LR5 201 aa2.4□□□□□ -2.03
SMC4-224ENST00000494612 GABRG3Q99928 467 aa2.4□□□□□ -2.03
SMC4-224ENST00000494612 LXNQ9BS40 222 aa2.4□□□□□ -2.03
SMC4-224ENST00000494612 RTBDNQ9BSG5 229 aaPredicted RBP2.4□□□□□ -2.03
SMC4-224ENST00000494612 DHX35Q9H5Z1 703 aaKnown RBP2.4□□□□□ -2.03
SMC4-224ENST00000494612 ARMC7Q9H6L4 198 aa2.4□□□□□ -2.03
SMC4-224ENST00000494612 VCX3AQ9NNX9 186 aa2.4□□□□□ -2.03
SMC4-224ENST00000494612 TAS2R5Q9NYW4 299 aa2.4□□□□□ -2.03
SMC4-224ENST00000494612 CES1P1Q9UKY3 287 aa2.4□□□□□ -2.03
SMC4-224ENST00000494612 WIF1Q9Y5W5 379 aa2.4□□□□□ -2.03
SMC4-224ENST00000494612 GMEB1Q9Y692 573 aa2.4□□□□□ -2.03
SMC4-224ENST00000494612 KIAA1549LQ6ZVL6 1849 aa2.4□□□□□ -2.03
SMC4-224ENST00000494612 TNRC6BQ9UPQ9 1833 aaKnown RBP2.4□□□□□ -2.03
SMC4-224ENST00000494612 PTPRBP23467 1997 aa2.4□□□□□ -2.03
SMC4-224ENST00000494612 MYO16Q9Y6X6 1858 aa2.39□□□□□ -2.03
SMC4-224ENST00000494612 CELSR3Q9NYQ7 3312 aa2.39□□□□□ -2.03
SMC4-224ENST00000494612 MUC22E2RYF6 1773 aaPredicted RBP2.39□□□□□ -2.03
SMC4-224ENST00000494612 PLXNB3Q9ULL4 1909 aa2.39□□□□□ -2.03
SMC4-224ENST00000494612 ATG2BQ96BY7 2078 aa2.39□□□□□ -2.03
SMC4-224ENST00000494612 GOLGA8QA0A0J9YX86 632 aa2.39□□□□□ -2.03
SMC4-224ENST00000494612 GMDSO60547 372 aa2.39□□□□□ -2.03
SMC4-224ENST00000494612 GATBO75879 557 aaKnown RBP2.39□□□□□ -2.03
SMC4-224ENST00000494612 SMC2O95347 1197 aa2.39□□□□□ -2.03
SMC4-224ENST00000494612 IGLV2-8P01709 118 aa2.39□□□□□ -2.03
SMC4-224ENST00000494612 IGLV3-19P01714 112 aa2.39□□□□□ -2.03
SMC4-224ENST00000494612 OR4Q2P0C623 313 aa2.39□□□□□ -2.03
SMC4-224ENST00000494612 HTR2CP28335 458 aa2.39□□□□□ -2.03
SMC4-224ENST00000494612 P2RY2P41231 377 aa2.39□□□□□ -2.03
SMC4-224ENST00000494612 FUT5Q11128 374 aa2.39□□□□□ -2.03
SMC4-224ENST00000494612 PDGFRLQ15198 375 aa2.39□□□□□ -2.03
SMC4-224ENST00000494612 SYCP1Q15431 976 aa2.39□□□□□ -2.03
SMC4-224ENST00000494612 VAMP3Q15836 100 aa2.39□□□□□ -2.03
SMC4-224ENST00000494612 LUZP6Q538Z0 58 aa2.39□□□□□ -2.03
SMC4-224ENST00000494612 PDPK2PQ6A1A2 396 aa2.39□□□□□ -2.03
SMC4-224ENST00000494612 LINC00336Q6ZUF6 198 aa2.39□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 47.6 ms