RNA–Protein interactions for RNA: ENST00000493919.5

BRCA1-222, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 2

Gene BRCA1, Length 1,948 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-222ENST00000493919 BATFQ16520 125 aa10.07□□□□□ -0.8
BRCA1-222ENST00000493919 ZNF585BQ52M93 769 aa10.07□□□□□ -0.8
BRCA1-222ENST00000493919 FAM71F2Q6NXP2 309 aa10.07□□□□□ -0.8
BRCA1-222ENST00000493919 KCNRGQ8N5I3 272 aa10.07□□□□□ -0.8
BRCA1-222ENST00000493919 OR4A4PQ8NGN8 299 aa10.07□□□□□ -0.8
BRCA1-222ENST00000493919 RNF141Q8WVD5 230 aa10.07□□□□□ -0.8
BRCA1-222ENST00000493919 CDCA4Q9BXL8 241 aa10.07□□□□□ -0.8
BRCA1-222ENST00000493919 PROK2Q9HC23 129 aa10.07□□□□□ -0.8
BRCA1-222ENST00000493919 SLAMF8Q9P0V8 285 aa10.07□□□□□ -0.8
BRCA1-222ENST00000493919 CLN8Q9UBY8 286 aa10.07□□□□□ -0.8
BRCA1-222ENST00000493919 GCN1Q92616 2671 aaKnown RBP10.06□□□□□ -0.8
BRCA1-222ENST00000493919 LRRC3CA6NJW4 275 aa10.06□□□□□ -0.8
BRCA1-222ENST00000493919 C17orf51A8MQB3 221 aa10.06□□□□□ -0.8
BRCA1-222ENST00000493919 ZNF593O00488 134 aaPredicted RBP10.06□□□□□ -0.8
BRCA1-222ENST00000493919 ZIC2O95409 532 aaPredicted RBP10.06□□□□□ -0.8
BRCA1-222ENST00000493919 OR4A8P0C604 315 aa10.06□□□□□ -0.8
BRCA1-222ENST00000493919 MAGEA5P43359 124 aa10.06□□□□□ -0.8
BRCA1-222ENST00000493919 COX20Q5RI15 118 aa10.06□□□□□ -0.8
BRCA1-222ENST00000493919 GFI1BQ5VTD9 330 aa10.06□□□□□ -0.8
BRCA1-222ENST00000493919 OLIG3Q7RTU3 272 aa10.06□□□□□ -0.8
BRCA1-222ENST00000493919 KISS1RQ969F8 398 aaPredicted RBP10.06□□□□□ -0.8
BRCA1-222ENST00000493919 MGLLQ99685 303 aa10.06□□□□□ -0.8
BRCA1-222ENST00000493919 C1orf198Q9H425 327 aa10.06□□□□□ -0.8
BRCA1-222ENST00000493919 SLC52A3Q9NQ40 469 aa10.06□□□□□ -0.8
BRCA1-222ENST00000493919 FRRS1LQ9P0K9 344 aa10.06□□□□□ -0.8
BRCA1-222ENST00000493919 B4GALT7Q9UBV7 327 aa10.06□□□□□ -0.8
BRCA1-222ENST00000493919 POLR3KQ9Y2Y1 108 aaPredicted RBP10.06□□□□□ -0.8
BRCA1-222ENST00000493919 HDGFL3Q9Y3E1 203 aa10.06□□□□□ -0.8
BRCA1-222ENST00000493919 OR51B2Q9Y5P1 312 aa10.06□□□□□ -0.8
BRCA1-222ENST00000493919 ENPP4Q9Y6X5 453 aa10.06□□□□□ -0.8
BRCA1-222ENST00000493919 NINQ8N4C6 2090 aa10.06□□□□□ -0.8
BRCA1-222ENST00000493919 GGT3PA6NGU5 568 aa10.05□□□□□ -0.8
BRCA1-222ENST00000493919 WISP2O76076 250 aa10.05□□□□□ -0.8
BRCA1-222ENST00000493919 IL5P05113 134 aa10.05□□□□□ -0.8
BRCA1-222ENST00000493919 SCG5P05408 212 aa10.05□□□□□ -0.8
BRCA1-222ENST00000493919 PLA2G2AP14555 144 aa10.05□□□□□ -0.8
BRCA1-222ENST00000493919 PGAM2P15259 253 aa10.05□□□□□ -0.8
BRCA1-222ENST00000493919 ZNF19P17023 458 aa10.05□□□□□ -0.8
BRCA1-222ENST00000493919 POU2AF1Q16633 256 aa10.05□□□□□ -0.8
BRCA1-222ENST00000493919 TMEM176BQ3YBM2 270 aaPredicted RBP10.05□□□□□ -0.8
BRCA1-222ENST00000493919 TMEM69Q5SWH9 247 aa10.05□□□□□ -0.8
BRCA1-222ENST00000493919 ZNF730Q6ZMV8 503 aa10.05□□□□□ -0.8
BRCA1-222ENST00000493919 TMEM251Q8N6I4 163 aa10.05□□□□□ -0.8
BRCA1-222ENST00000493919 SLC26A10Q8NG04 563 aa10.05□□□□□ -0.8
BRCA1-222ENST00000493919 OR52E5Q8NH55 327 aa10.05□□□□□ -0.8
BRCA1-222ENST00000493919 NUDCD2Q8WVJ2 157 aa10.05□□□□□ -0.8
BRCA1-222ENST00000493919 SLC25A28Q96A46 364 aa10.05□□□□□ -0.8
BRCA1-222ENST00000493919 ISOC2Q96AB3 205 aa10.05□□□□□ -0.8
BRCA1-222ENST00000493919 TMEM18Q96B42 140 aa10.05□□□□□ -0.8
BRCA1-222ENST00000493919 PYURFQ96I23 114 aa10.05□□□□□ -0.8
BRCA1-222ENST00000493919 DEFB127Q9H1M4 99 aa10.05□□□□□ -0.8
BRCA1-222ENST00000493919 ZNF703Q9H7S9 590 aaPredicted RBP10.05□□□□□ -0.8
BRCA1-222ENST00000493919 SLC25A37Q9NYZ2 338 aa10.05□□□□□ -0.8
BRCA1-222ENST00000493919 TMEFF2Q9UIK5 374 aaPredicted RBP10.05□□□□□ -0.8
BRCA1-222ENST00000493919 UFC1Q9Y3C8 167 aa10.05□□□□□ -0.8
BRCA1-222ENST00000493919 TENM4Q6N022 2769 aa10.05□□□□□ -0.8
BRCA1-222ENST00000493919 FXYD6-FXYD2A0A087WZ82 144 aa10.05□□□□□ -0.8
BRCA1-222ENST00000493919 UBE2QL1A1L167 161 aa10.05□□□□□ -0.8
BRCA1-222ENST00000493919 HMGN4O00479 90 aa10.05□□□□□ -0.8
BRCA1-222ENST00000493919 CELA3AP09093 270 aa10.05□□□□□ -0.8
BRCA1-222ENST00000493919 RFPL3SP0C7P2 107 aa10.05□□□□□ -0.8
BRCA1-222ENST00000493919 DCTP40126 519 aa10.05□□□□□ -0.8
BRCA1-222ENST00000493919 PTGDSP41222 190 aa10.05□□□□□ -0.8
BRCA1-222ENST00000493919 UQCRFS1P47985 274 aa10.05□□□□□ -0.8
BRCA1-222ENST00000493919 PLP1P60201 277 aa10.05□□□□□ -0.8
BRCA1-222ENST00000493919 FUT5Q11128 374 aa10.05□□□□□ -0.8
BRCA1-222ENST00000493919 GAGE5Q13069 117 aa10.05□□□□□ -0.8
BRCA1-222ENST00000493919 GAGE6Q13070 117 aa10.05□□□□□ -0.8
BRCA1-222ENST00000493919 ZNF154Q13106 437 aa10.05□□□□□ -0.8
BRCA1-222ENST00000493919 LTC4SQ16873 150 aa10.05□□□□□ -0.8
BRCA1-222ENST00000493919 ZNF324BQ6AW86 544 aaPredicted RBP10.05□□□□□ -0.8
BRCA1-222ENST00000493919 GFRALQ6UXV0 394 aa10.05□□□□□ -0.8
BRCA1-222ENST00000493919 TMEM182Q6ZP80 229 aaPredicted RBP10.05□□□□□ -0.8
BRCA1-222ENST00000493919 SLC36A1Q7Z2H8 476 aa10.05□□□□□ -0.8
BRCA1-222ENST00000493919 MARCH3Q86UD3 253 aa10.05□□□□□ -0.8
BRCA1-222ENST00000493919 GNRHR2Q96P88 292 aa10.05□□□□□ -0.8
BRCA1-222ENST00000493919 CIB3Q96Q77 187 aaPredicted RBP10.05□□□□□ -0.8
BRCA1-222ENST00000493919 CHIAQ9BZP6 476 aa10.05□□□□□ -0.8
BRCA1-222ENST00000493919 FXYD6Q9H0Q3 95 aa10.05□□□□□ -0.8
BRCA1-222ENST00000493919 EXOSC4Q9NPD3 245 aaKnown RBP10.05□□□□□ -0.8
BRCA1-222ENST00000493919 CTNNBIP1Q9NSA3 81 aaPredicted RBP10.05□□□□□ -0.8
BRCA1-222ENST00000493919 CDC42EP3Q9UKI2 254 aa10.05□□□□□ -0.8
BRCA1-222ENST00000493919 UBR5O95071 2799 aaPredicted RBP10.05□□□□□ -0.8
BRCA1-222ENST00000493919 ZNHIT1O43257 154 aa10.04□□□□□ -0.8
BRCA1-222ENST00000493919 TRAPPC6AO75865 159 aa10.04□□□□□ -0.8
BRCA1-222ENST00000493919 OR2C1O95371 312 aa10.04□□□□□ -0.8
BRCA1-222ENST00000493919 CHRM2P08172 466 aa10.04□□□□□ -0.8
BRCA1-222ENST00000493919 OR5H8P0DN80 308 aa10.04□□□□□ -0.8
BRCA1-222ENST00000493919 FPR1P21462 350 aa10.04□□□□□ -0.8
BRCA1-222ENST00000493919 GNLYP22749 145 aa10.04□□□□□ -0.8
BRCA1-222ENST00000493919 H3F3AP84243 136 aa10.04□□□□□ -0.8
BRCA1-222ENST00000493919 EFNB1P98172 346 aa10.04□□□□□ -0.8
BRCA1-222ENST00000493919 PDZD11Q5EBL8 140 aa10.04□□□□□ -0.8
BRCA1-222ENST00000493919 FNDC7Q5VTL7 733 aa10.04□□□□□ -0.8
BRCA1-222ENST00000493919 FRRS1Q6ZNA5 592 aa10.04□□□□□ -0.8
BRCA1-222ENST00000493919 TMEM91Q6ZNR0 172 aa10.04□□□□□ -0.8
BRCA1-222ENST00000493919 SLC25A26Q70HW3 274 aa10.04□□□□□ -0.8
BRCA1-222ENST00000493919 DPY19L4Q7Z388 723 aa10.04□□□□□ -0.8
BRCA1-222ENST00000493919 HMGN2P46Q86SG4 172 aa10.04□□□□□ -0.8
BRCA1-222ENST00000493919 SIAH3Q8IW03 269 aa10.04□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms