RNA–Protein interactions for RNA: ENST00000489028.1

RFC4-213, Transcript of replication factor C subunit 4, humanhuman

TSL 3

Gene RFC4, Length 533 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC4-213ENST00000489028 TNKS1BP1Q9C0C2 1729 aaKnown RBP1.66□□□□□ -2.14
RFC4-213ENST00000489028 ANKRD12Q6UB98 2062 aa1.65□□□□□ -2.14
RFC4-213ENST00000489028 GOLGA6L4A6NEF3 574 aa1.65□□□□□ -2.15
RFC4-213ENST00000489028 FABP12A6NFH5 140 aa1.65□□□□□ -2.15
RFC4-213ENST00000489028 GOLGA6L10A6NI86 522 aa1.65□□□□□ -2.15
RFC4-213ENST00000489028 FAM183AA6NL82 134 aa1.65□□□□□ -2.15
RFC4-213ENST00000489028 EFCAB9A8MZ26 197 aa1.65□□□□□ -2.15
RFC4-213ENST00000489028 K7EPK0 472 aa1.65□□□□□ -2.15
RFC4-213ENST00000489028 LGALS9O00182 355 aa1.65□□□□□ -2.15
RFC4-213ENST00000489028 MFNGO00587 321 aa1.65□□□□□ -2.15
RFC4-213ENST00000489028 ITGB1BP1O14713 200 aa1.65□□□□□ -2.15
RFC4-213ENST00000489028 FFAR1O14842 300 aa1.65□□□□□ -2.15
RFC4-213ENST00000489028 AQP9O43315 295 aa1.65□□□□□ -2.15
RFC4-213ENST00000489028 SYNGR1O43759 233 aa1.65□□□□□ -2.15
RFC4-213ENST00000489028 MPZL2O60487 215 aa1.65□□□□□ -2.15
RFC4-213ENST00000489028 CDRT1O95170 752 aa1.65□□□□□ -2.15
RFC4-213ENST00000489028 ORM1P02763 201 aa1.65□□□□□ -2.15
RFC4-213ENST00000489028 SOD3P08294 240 aa1.65□□□□□ -2.15
RFC4-213ENST00000489028 SPNP16150 400 aa1.65□□□□□ -2.15
RFC4-213ENST00000489028 M6PRP20645 277 aa1.65□□□□□ -2.15
RFC4-213ENST00000489028 F8A1P23610 371 aa1.65□□□□□ -2.15
RFC4-213ENST00000489028 RCVRNP35243 200 aa1.65□□□□□ -2.15
RFC4-213ENST00000489028 TGM4P49221 684 aa1.65□□□□□ -2.15
RFC4-213ENST00000489028 ZNF83P51522 516 aa1.65□□□□□ -2.15
RFC4-213ENST00000489028 DLX6P56179 175 aa1.65□□□□□ -2.15
RFC4-213ENST00000489028 UBE2G2P60604 165 aa1.65□□□□□ -2.15
RFC4-213ENST00000489028 IGFBP7Q16270 282 aa1.65□□□□□ -2.15
RFC4-213ENST00000489028 EXOC3L4Q17RC7 722 aa1.65□□□□□ -2.15
RFC4-213ENST00000489028 SP6Q3SY56 376 aa1.65□□□□□ -2.15
RFC4-213ENST00000489028 TIMM23BQ5SRD1 257 aa1.65□□□□□ -2.15
RFC4-213ENST00000489028 SDHAF4Q5VUM1 108 aa1.65□□□□□ -2.15
RFC4-213ENST00000489028 NXNL2Q5VZ03 156 aa1.65□□□□□ -2.15
RFC4-213ENST00000489028 CASP12Q6UXS9 341 aa1.65□□□□□ -2.15
RFC4-213ENST00000489028 SLC13A5Q86YT5 568 aaPredicted RBP1.65□□□□□ -2.15
RFC4-213ENST00000489028 SLC25A45Q8N413 288 aa1.65□□□□□ -2.15
RFC4-213ENST00000489028 ARL5BQ96KC2 179 aa1.65□□□□□ -2.15
RFC4-213ENST00000489028 OLFM3Q96PB7 478 aa1.65□□□□□ -2.15
RFC4-213ENST00000489028 PEBP4Q96S96 227 aa1.65□□□□□ -2.15
RFC4-213ENST00000489028 UPF3BQ9BZI7 483 aaKnown RBP1.65□□□□□ -2.15
RFC4-213ENST00000489028 DRC3Q9H069 523 aa1.65□□□□□ -2.15
RFC4-213ENST00000489028 WDR54Q9H977 334 aa1.65□□□□□ -2.15
RFC4-213ENST00000489028 INIPQ9NRY2 104 aa1.65□□□□□ -2.15
RFC4-213ENST00000489028 NKIRAS1Q9NYS0 192 aa1.65□□□□□ -2.15
RFC4-213ENST00000489028 SCML1Q9UN30 329 aa1.65□□□□□ -2.15
RFC4-213ENST00000489028 FBN1P35555 2871 aaKnown RBP1.65□□□□□ -2.15
RFC4-213ENST00000489028 A0A0A6YYH2 397 aa1.64□□□□□ -2.15
RFC4-213ENST00000489028 IGHV2-26A0A0B4J1V2 119 aa1.64□□□□□ -2.15
RFC4-213ENST00000489028 IZUMO1RA6ND01 250 aa1.64□□□□□ -2.15
RFC4-213ENST00000489028 A6NJ64 397 aa1.64□□□□□ -2.15
RFC4-213ENST00000489028 ZNF98A6NK75 572 aa1.64□□□□□ -2.15
RFC4-213ENST00000489028 F5H5K5 113 aa1.64□□□□□ -2.15
RFC4-213ENST00000489028 PSIP1O75475 530 aaKnown RBP1.64□□□□□ -2.15
RFC4-213ENST00000489028 CA2P00918 260 aa1.64□□□□□ -2.15
RFC4-213ENST00000489028 NRASP01111 189 aa1.64□□□□□ -2.15
RFC4-213ENST00000489028 HRASP01112 189 aa1.64□□□□□ -2.15
RFC4-213ENST00000489028 KRASP01116 189 aa1.64□□□□□ -2.15
RFC4-213ENST00000489028 IGLV7-43P04211 117 aa1.64□□□□□ -2.15
RFC4-213ENST00000489028 OR5AC1P0C628 307 aa1.64□□□□□ -2.15
RFC4-213ENST00000489028 HLA-DMAP28067 261 aa1.64□□□□□ -2.15
RFC4-213ENST00000489028 ANP32AP39687 249 aaKnown RBP1.64□□□□□ -2.15
RFC4-213ENST00000489028 ACTR1BP42025 376 aa1.64□□□□□ -2.15
RFC4-213ENST00000489028 MEF2BQ02080 365 aaPredicted RBP1.64□□□□□ -2.15
RFC4-213ENST00000489028 PAFAH1B3Q15102 231 aaKnown RBP1.64□□□□□ -2.15
RFC4-213ENST00000489028 CLEC12BQ2HXU8 276 aa1.64□□□□□ -2.15
RFC4-213ENST00000489028 KRTAP6-3Q3LI67 103 aa1.64□□□□□ -2.15
RFC4-213ENST00000489028 TMEM215Q68D42 235 aa1.64□□□□□ -2.15
RFC4-213ENST00000489028 FAM45BPQ6NSW5 357 aa1.64□□□□□ -2.15
RFC4-213ENST00000489028 CLEC18BQ6UXF7 455 aa1.64□□□□□ -2.15
RFC4-213ENST00000489028 OLIG3Q7RTU3 272 aa1.64□□□□□ -2.15
RFC4-213ENST00000489028 DAZ4Q86SG3 579 aaKnown RBP1.64□□□□□ -2.15
RFC4-213ENST00000489028 FUNDC1Q8IVP5 155 aa1.64□□□□□ -2.15
RFC4-213ENST00000489028 GATD1Q8NB37 220 aa1.64□□□□□ -2.15
RFC4-213ENST00000489028 OR5L1Q8NGL2 311 aa1.64□□□□□ -2.15
RFC4-213ENST00000489028 SUN5Q8TC36 379 aa1.64□□□□□ -2.15
RFC4-213ENST00000489028 KLF14Q8TD94 323 aaPredicted RBP1.64□□□□□ -2.15
RFC4-213ENST00000489028 DDI1Q8WTU0 396 aa1.64□□□□□ -2.15
RFC4-213ENST00000489028 SMIM12Q96EX1 92 aa1.64□□□□□ -2.15
RFC4-213ENST00000489028 FAM210AQ96ND0 272 aa1.64□□□□□ -2.15
RFC4-213ENST00000489028 LINC01587Q99440 93 aa1.64□□□□□ -2.15
RFC4-213ENST00000489028 ZNF426Q9BUY5 554 aa1.64□□□□□ -2.15
RFC4-213ENST00000489028 ULBP1Q9BZM6 244 aa1.64□□□□□ -2.15
RFC4-213ENST00000489028 LINC00574Q9H8X3 128 aa1.64□□□□□ -2.15
RFC4-213ENST00000489028 DAZ1Q9NQZ3 744 aaKnown RBP1.64□□□□□ -2.15
RFC4-213ENST00000489028 SPANXB1Q9NS25 103 aaPredicted RBP1.64□□□□□ -2.15
RFC4-213ENST00000489028 DMAC2Q9NW81 257 aa1.64□□□□□ -2.15
RFC4-213ENST00000489028 RBM12B-AS1Q9P1G2 102 aa1.64□□□□□ -2.15
RFC4-213ENST00000489028 ZNF706Q9Y5V0 76 aaPredicted RBP1.64□□□□□ -2.15
RFC4-213ENST00000489028 NOS1P29475 1434 aa1.64□□□□□ -2.15
RFC4-213ENST00000489028 SCN1AP35498 2009 aa1.64□□□□□ -2.15
RFC4-213ENST00000489028 RAD50Q92878 1312 aa1.64□□□□□ -2.15
RFC4-213ENST00000489028 DYSFO75923 2080 aa1.63□□□□□ -2.15
RFC4-213ENST00000489028 TMEM131Q92545 1883 aa1.63□□□□□ -2.15
RFC4-213ENST00000489028 LEUTXA8MZ59 168 aa1.63□□□□□ -2.15
RFC4-213ENST00000489028 FTCDNL1E5RQL4 147 aa1.63□□□□□ -2.15
RFC4-213ENST00000489028 J3QLI3 93 aa1.63□□□□□ -2.15
RFC4-213ENST00000489028 GPR171O14626 319 aa1.63□□□□□ -2.15
RFC4-213ENST00000489028 SLC31A1O15431 190 aa1.63□□□□□ -2.15
RFC4-213ENST00000489028 TCF21O43680 179 aa1.63□□□□□ -2.15
RFC4-213ENST00000489028 CNMDO75829 334 aa1.63□□□□□ -2.15
RFC4-213ENST00000489028 KCNK2O95069 426 aa1.63□□□□□ -2.15
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms