RNA–Protein interactions for RNA: ENST00000488989.1

CLDN11-208, Transcript of claudin 11, humanhuman

TSL 4

Gene CLDN11, Length 600 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN11-208ENST00000488989 DUX4L5P0CJ88 424 aa13.33□□□□□ -0.28
CLDN11-208ENST00000488989 DUX4L6P0CJ89 424 aa13.33□□□□□ -0.28
CLDN11-208ENST00000488989 DUX4L7P0CJ90 424 aa13.33□□□□□ -0.28
CLDN11-208ENST00000488989 CBX5P45973 191 aa13.33□□□□□ -0.28
CLDN11-208ENST00000488989 ARFRP1Q13795 201 aa13.33□□□□□ -0.28
CLDN11-208ENST00000488989 BAK1Q16611 211 aa13.33□□□□□ -0.28
CLDN11-208ENST00000488989 DEFB113Q30KQ7 82 aa13.33□□□□□ -0.28
CLDN11-208ENST00000488989 AVPI1Q5T686 147 aa13.33□□□□□ -0.28
CLDN11-208ENST00000488989 RSBN1Q5VWQ0 802 aaPredicted RBP13.33□□□□□ -0.28
CLDN11-208ENST00000488989 SLC35E4Q6ICL7 350 aa13.33□□□□□ -0.28
CLDN11-208ENST00000488989 ZNF880Q6PDB4 577 aa13.33□□□□□ -0.28
CLDN11-208ENST00000488989 DUX4L9Q6RFH8 374 aaPredicted RBP13.33□□□□□ -0.28
CLDN11-208ENST00000488989 LYPD2Q6UXB3 125 aa13.33□□□□□ -0.28
CLDN11-208ENST00000488989 ZNF497Q6ZNH5 498 aa13.33□□□□□ -0.28
CLDN11-208ENST00000488989 SPICQ8N5J4 248 aa13.33□□□□□ -0.28
CLDN11-208ENST00000488989 FAM216BQ8N7L0 139 aa13.33□□□□□ -0.28
CLDN11-208ENST00000488989 ASCC1Q8N9N2 400 aaKnown RBP13.33□□□□□ -0.28
CLDN11-208ENST00000488989 ZNRF1Q8ND25 227 aa13.33□□□□□ -0.28
CLDN11-208ENST00000488989 OR5D13Q8NGL4 314 aa13.33□□□□□ -0.28
CLDN11-208ENST00000488989 FCAMRQ8WWV6 532 aa13.33□□□□□ -0.28
CLDN11-208ENST00000488989 BORCS5Q969J3 196 aa13.33□□□□□ -0.28
CLDN11-208ENST00000488989 PERPQ96FX8 193 aa13.33□□□□□ -0.28
CLDN11-208ENST00000488989 CHST6Q9GZX3 395 aa13.33□□□□□ -0.28
CLDN11-208ENST00000488989 ETAA1Q9NY74 926 aa13.33□□□□□ -0.28
CLDN11-208ENST00000488989 CTSZQ9UBR2 303 aa13.33□□□□□ -0.28
CLDN11-208ENST00000488989 DUX4Q9UBX2 424 aa13.33□□□□□ -0.28
CLDN11-208ENST00000488989 VWC2LB2RUY7 222 aa13.32□□□□□ -0.28
CLDN11-208ENST00000488989 F5H0A9 414 aaPredicted RBP13.32□□□□□ -0.28
CLDN11-208ENST00000488989 HSPB6O14558 160 aa13.32□□□□□ -0.28
CLDN11-208ENST00000488989 TMPRSS2O15393 492 aa13.32□□□□□ -0.28
CLDN11-208ENST00000488989 ADAM20O43506 726 aa13.32□□□□□ -0.28
CLDN11-208ENST00000488989 FCN3O75636 299 aa13.32□□□□□ -0.28
CLDN11-208ENST00000488989 IL7P13232 177 aa13.32□□□□□ -0.28
CLDN11-208ENST00000488989 SELLP14151 372 aa13.32□□□□□ -0.28
CLDN11-208ENST00000488989 NAT1P18440 290 aa13.32□□□□□ -0.28
CLDN11-208ENST00000488989 ERP29P30040 261 aaKnown RBP13.32□□□□□ -0.28
CLDN11-208ENST00000488989 DSCR9P59020 149 aa13.32□□□□□ -0.28
CLDN11-208ENST00000488989 GRK1Q15835 563 aa13.32□□□□□ -0.28
CLDN11-208ENST00000488989 SRSF7Q16629 238 aaKnown RBP eCLIP13.32□□□□□ -0.28
CLDN11-208ENST00000488989 NEK7Q8TDX7 302 aa13.32□□□□□ -0.28
CLDN11-208ENST00000488989 C10orf105Q8TEF2 133 aa13.32□□□□□ -0.28
CLDN11-208ENST00000488989 DYRK2Q92630 601 aa13.32□□□□□ -0.28
CLDN11-208ENST00000488989 COQ2Q96H96 371 aa13.32□□□□□ -0.28
CLDN11-208ENST00000488989 LURAP1Q96LR2 239 aa13.32□□□□□ -0.28
CLDN11-208ENST00000488989 HDHD3Q9BSH5 251 aaPredicted RBP13.32□□□□□ -0.28
CLDN11-208ENST00000488989 THAP7Q9BT49 309 aaPredicted RBP13.32□□□□□ -0.28
CLDN11-208ENST00000488989 C12orf4Q9NQ89 552 aa13.32□□□□□ -0.28
CLDN11-208ENST00000488989 MIOXQ9UGB7 285 aa13.32□□□□□ -0.28
CLDN11-208ENST00000488989 ZNF107Q9UII5 783 aaPredicted RBP13.32□□□□□ -0.28
CLDN11-208ENST00000488989 MALRD1Q5VYJ5 2156 aa13.32□□□□□ -0.28
CLDN11-208ENST00000488989 ISPDA4D126 451 aa13.31□□□□□ -0.28
CLDN11-208ENST00000488989 H7C1Q1 480 aa13.31□□□□□ -0.28
CLDN11-208ENST00000488989 LANCL1O43813 399 aa13.31□□□□□ -0.28
CLDN11-208ENST00000488989 ORC5O43913 435 aa13.31□□□□□ -0.28
CLDN11-208ENST00000488989 UPK1BO75841 260 aa13.31□□□□□ -0.28
CLDN11-208ENST00000488989 RBBP9O75884 186 aa13.31□□□□□ -0.28
CLDN11-208ENST00000488989 MT-ND4P03905 459 aa13.31□□□□□ -0.28
CLDN11-208ENST00000488989 WNT2P09544 360 aa13.31□□□□□ -0.28
CLDN11-208ENST00000488989 ATXN7L3Q14CW9 347 aaPredicted RBP13.31□□□□□ -0.28
CLDN11-208ENST00000488989 CARTPTQ16568 116 aa13.31□□□□□ -0.28
CLDN11-208ENST00000488989 CLEC2AQ6UVW9 174 aa13.31□□□□□ -0.28
CLDN11-208ENST00000488989 ZNF841Q6ZN19 808 aa13.31□□□□□ -0.28
CLDN11-208ENST00000488989 Q6ZPA2 131 aa13.31□□□□□ -0.28
CLDN11-208ENST00000488989 Q6ZS49 121 aa13.31□□□□□ -0.28
CLDN11-208ENST00000488989 TRAPPC6BQ86SZ2 158 aa13.31□□□□□ -0.28
CLDN11-208ENST00000488989 MRPL30Q8TCC3 161 aaKnown RBP13.31□□□□□ -0.28
CLDN11-208ENST00000488989 FAM168AQ92567 244 aa13.31□□□□□ -0.28
CLDN11-208ENST00000488989 BPESC1Q9GZL8 116 aa13.31□□□□□ -0.28
CLDN11-208ENST00000488989 PATZ1Q9HBE1 687 aaKnown RBP13.31□□□□□ -0.28
CLDN11-208ENST00000488989 PALMDQ9NP74 551 aa13.31□□□□□ -0.28
CLDN11-208ENST00000488989 KLK11Q9UBX7 282 aa13.31□□□□□ -0.28
CLDN11-208ENST00000488989 POLQO75417 2590 aa13.31□□□□□ -0.28
CLDN11-208ENST00000488989 UNC79Q9P2D8 2635 aa13.31□□□□□ -0.28
CLDN11-208ENST00000488989 TMEM30CPA0ZSE6 113 aa13.3□□□□□ -0.28
CLDN11-208ENST00000488989 FCGR3AP08637 254 aa13.3□□□□□ -0.28
CLDN11-208ENST00000488989 RCVRNP35243 200 aa13.3□□□□□ -0.28
CLDN11-208ENST00000488989 GDNFP39905 211 aa13.3□□□□□ -0.28
CLDN11-208ENST00000488989 ACTBP60709 375 aa13.3□□□□□ -0.28
CLDN11-208ENST00000488989 ACTG1P63261 375 aa13.3□□□□□ -0.28
CLDN11-208ENST00000488989 MRPS15P82914 257 aaKnown RBP13.3□□□□□ -0.28
CLDN11-208ENST00000488989 IFITM3Q01628 133 aa13.3□□□□□ -0.28
CLDN11-208ENST00000488989 RNASE12Q5GAN4 147 aaKnown RBP13.3□□□□□ -0.28
CLDN11-208ENST00000488989 HOGA1Q86XE5 327 aa13.3□□□□□ -0.28
CLDN11-208ENST00000488989 TMEM185AQ8NFB2 350 aa13.3□□□□□ -0.28
CLDN11-208ENST00000488989 NEIL1Q96FI4 390 aaPredicted RBP13.3□□□□□ -0.28
CLDN11-208ENST00000488989 PIMREGQ9BSJ6 248 aa13.3□□□□□ -0.28
CLDN11-208ENST00000488989 MBNL3Q9NUK0 354 aaKnown RBP13.3□□□□□ -0.28
CLDN11-208ENST00000488989 SLC25A10Q9UBX3 287 aaPredicted RBP13.3□□□□□ -0.28
CLDN11-208ENST00000488989 NAV2Q8IVL1 2488 aa13.29□□□□□ -0.28
CLDN11-208ENST00000488989 FUOMA2VDF0 154 aa13.29□□□□□ -0.28
CLDN11-208ENST00000488989 DVL1O14640 695 aa13.29□□□□□ -0.28
CLDN11-208ENST00000488989 GPR37O15354 613 aa13.29□□□□□ -0.28
CLDN11-208ENST00000488989 NDUFB3O43676 98 aa13.29□□□□□ -0.28
CLDN11-208ENST00000488989 RPS2P15880 293 aaKnown RBP13.29□□□□□ -0.28
CLDN11-208ENST00000488989 P2RX3P56373 397 aa13.29□□□□□ -0.28
CLDN11-208ENST00000488989 AESQ08117 197 aa13.29□□□□□ -0.28
CLDN11-208ENST00000488989 CR1LQ2VPA4 569 aa13.29□□□□□ -0.28
CLDN11-208ENST00000488989 LRRC10Q5BKY1 277 aa13.29□□□□□ -0.28
CLDN11-208ENST00000488989 KRBOX4Q5JUW0 171 aa13.29□□□□□ -0.28
CLDN11-208ENST00000488989 TRIQKQ629K1 86 aa13.29□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 48.2 ms