RNA–Protein interactions for RNA: ENST00000487709.1

HMGB1P36-201, Transcript of high mobility group box 1 pseudogene 36, humanhuman

BASIC

Gene HMGB1P36, Length 576 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P36-201ENST00000487709 LRRC6Q86X45 466 aa1.87□□□□□ -2.11
HMGB1P36-201ENST00000487709 C10orf107Q8IVU9 208 aa1.87□□□□□ -2.11
HMGB1P36-201ENST00000487709 CDRT4Q8N9R6 151 aa1.87□□□□□ -2.11
HMGB1P36-201ENST00000487709 ZFP62Q8NB50 900 aaPredicted RBP1.87□□□□□ -2.11
HMGB1P36-201ENST00000487709 NXF2Q9GZY0 626 aaKnown RBP1.87□□□□□ -2.11
HMGB1P36-201ENST00000487709 PORCNQ9H237 461 aa1.87□□□□□ -2.11
HMGB1P36-201ENST00000487709 ASB7Q9H672 318 aa1.87□□□□□ -2.11
HMGB1P36-201ENST00000487709 TMEM38BQ9NVV0 291 aa1.87□□□□□ -2.11
HMGB1P36-201ENST00000487709 RMND1Q9NWS8 449 aa1.87□□□□□ -2.11
HMGB1P36-201ENST00000487709 DDIT4Q9NX09 232 aa1.87□□□□□ -2.11
HMGB1P36-201ENST00000487709 KLF13Q9Y2Y9 288 aaPredicted RBP1.87□□□□□ -2.11
HMGB1P36-201ENST00000487709 RPRD2Q5VT52 1461 aaKnown RBP1.87□□□□□ -2.11
HMGB1P36-201ENST00000487709 NRCAMQ92823 1304 aa1.87□□□□□ -2.11
HMGB1P36-201ENST00000487709 BRCA1P38398 1863 aaKnown RBP1.86□□□□□ -2.11
HMGB1P36-201ENST00000487709 MKRN2OSH3BPM6 223 aa1.86□□□□□ -2.11
HMGB1P36-201ENST00000487709 K7EPK0 472 aa1.86□□□□□ -2.11
HMGB1P36-201ENST00000487709 PLPP3O14495 311 aa1.86□□□□□ -2.11
HMGB1P36-201ENST00000487709 LIN7AO14910 233 aaPredicted RBP1.86□□□□□ -2.11
HMGB1P36-201ENST00000487709 PSCAO43653 123 aa1.86□□□□□ -2.11
HMGB1P36-201ENST00000487709 MYO1DO94832 1006 aa1.86□□□□□ -2.11
HMGB1P36-201ENST00000487709 AHSA1O95433 338 aa1.86□□□□□ -2.11
HMGB1P36-201ENST00000487709 KRT7P08729 469 aa1.86□□□□□ -2.11
HMGB1P36-201ENST00000487709 PET100P0DJ07 73 aa1.86□□□□□ -2.11
HMGB1P36-201ENST00000487709 RPA3P35244 121 aaPredicted RBP1.86□□□□□ -2.11
HMGB1P36-201ENST00000487709 RAB38P57729 211 aa1.86□□□□□ -2.11
HMGB1P36-201ENST00000487709 FLOT2Q14254 428 aa1.86□□□□□ -2.11
HMGB1P36-201ENST00000487709 LINC00303Q3SY05 128 aa1.86□□□□□ -2.11
HMGB1P36-201ENST00000487709 PDZD11Q5EBL8 140 aa1.86□□□□□ -2.11
HMGB1P36-201ENST00000487709 HBMQ6B0K9 141 aa1.86□□□□□ -2.11
HMGB1P36-201ENST00000487709 CLEC18BQ6UXF7 455 aa1.86□□□□□ -2.11
HMGB1P36-201ENST00000487709 FAM151BQ6UXP7 276 aa1.86□□□□□ -2.11
HMGB1P36-201ENST00000487709 AHSA2Q719I0 299 aa1.86□□□□□ -2.11
HMGB1P36-201ENST00000487709 GALNT10Q86SR1 603 aa1.86□□□□□ -2.11
HMGB1P36-201ENST00000487709 C3orf22Q8N5N4 141 aa1.86□□□□□ -2.11
HMGB1P36-201ENST00000487709 ZNF565Q8N9K5 539 aa1.86□□□□□ -2.11
HMGB1P36-201ENST00000487709 ATP6V1C2Q8NEY4 427 aa1.86□□□□□ -2.11
HMGB1P36-201ENST00000487709 OR8S1Q8NH09 359 aa1.86□□□□□ -2.11
HMGB1P36-201ENST00000487709 PYURFQ96I23 114 aa1.86□□□□□ -2.11
HMGB1P36-201ENST00000487709 PKMYT1Q99640 499 aa1.86□□□□□ -2.11
HMGB1P36-201ENST00000487709 PITX2Q99697 317 aa1.86□□□□□ -2.11
HMGB1P36-201ENST00000487709 DCUN1D5Q9BTE7 237 aa1.86□□□□□ -2.11
HMGB1P36-201ENST00000487709 SPZ1Q9BXG8 430 aa1.86□□□□□ -2.11
HMGB1P36-201ENST00000487709 TXNIPQ9H3M7 391 aa1.86□□□□□ -2.11
HMGB1P36-201ENST00000487709 METTL8Q9H825 291 aaKnown RBP1.86□□□□□ -2.11
HMGB1P36-201ENST00000487709 TMBIM4Q9HC24 238 aa1.86□□□□□ -2.11
HMGB1P36-201ENST00000487709 ZNF586Q9NXT0 402 aa1.86□□□□□ -2.11
HMGB1P36-201ENST00000487709 ICOSQ9Y6W8 199 aa1.86□□□□□ -2.11
HMGB1P36-201ENST00000487709 R4GN34 69 aa1.86□□□□□ -2.11
HMGB1P36-201ENST00000487709 MYBPHLA2RUH7 354 aa1.85□□□□□ -2.11
HMGB1P36-201ENST00000487709 FABP12A6NFH5 140 aa1.85□□□□□ -2.11
HMGB1P36-201ENST00000487709 GOLGA6L10A6NI86 522 aa1.85□□□□□ -2.11
HMGB1P36-201ENST00000487709 F5H5P2 479 aa1.85□□□□□ -2.11
HMGB1P36-201ENST00000487709 H3BQ85 93 aa1.85□□□□□ -2.11
HMGB1P36-201ENST00000487709 SMLR1H3BR10 107 aa1.85□□□□□ -2.11
HMGB1P36-201ENST00000487709 K7EN84 100 aa1.85□□□□□ -2.11
HMGB1P36-201ENST00000487709 SULT1C2O00338 296 aa1.85□□□□□ -2.11
HMGB1P36-201ENST00000487709 COCHO43405 550 aa1.85□□□□□ -2.11
HMGB1P36-201ENST00000487709 SGCEO43556 437 aa1.85□□□□□ -2.11
HMGB1P36-201ENST00000487709 SOD3P08294 240 aa1.85□□□□□ -2.11
HMGB1P36-201ENST00000487709 P0C880 135 aa1.85□□□□□ -2.11
HMGB1P36-201ENST00000487709 SLC35E2BP0CK96 405 aa1.85□□□□□ -2.11
HMGB1P36-201ENST00000487709 RD3LP0DJH9 198 aa1.85□□□□□ -2.11
HMGB1P36-201ENST00000487709 HRES1P13985 223 aa1.85□□□□□ -2.11
HMGB1P36-201ENST00000487709 CRABP2P29373 138 aa1.85□□□□□ -2.11
HMGB1P36-201ENST00000487709 MAGEA6P43360 314 aa1.85□□□□□ -2.11
HMGB1P36-201ENST00000487709 CBX5P45973 191 aa1.85□□□□□ -2.11
HMGB1P36-201ENST00000487709 EMP2P54851 167 aa1.85□□□□□ -2.11
HMGB1P36-201ENST00000487709 MYL6P60660 151 aa1.85□□□□□ -2.11
HMGB1P36-201ENST00000487709 CTAG1AP78358 180 aa1.85□□□□□ -2.11
HMGB1P36-201ENST00000487709 ITGB3BPQ13352 177 aaPredicted RBP1.85□□□□□ -2.11
HMGB1P36-201ENST00000487709 TMEM241Q24JQ0 296 aa1.85□□□□□ -2.11
HMGB1P36-201ENST00000487709 BSXQ3C1V8 233 aa1.85□□□□□ -2.11
HMGB1P36-201ENST00000487709 Q499Y3 187 aa1.85□□□□□ -2.11
HMGB1P36-201ENST00000487709 ACTBL2Q562R1 376 aa1.85□□□□□ -2.11
HMGB1P36-201ENST00000487709 ACTL10Q5JWF8 245 aa1.85□□□□□ -2.11
HMGB1P36-201ENST00000487709 RBM48Q5RL73 367 aaKnown RBP1.85□□□□□ -2.11
HMGB1P36-201ENST00000487709 LYZL2Q7Z4W2 148 aa1.85□□□□□ -2.11
HMGB1P36-201ENST00000487709 DPPA2Q7Z7J5 298 aa1.85□□□□□ -2.11
HMGB1P36-201ENST00000487709 PRNTQ86SH4 94 aa1.85□□□□□ -2.11
HMGB1P36-201ENST00000487709 OR4K17Q8NGC6 315 aa1.85□□□□□ -2.11
HMGB1P36-201ENST00000487709 OR5AK3PQ8NH89 298 aa1.85□□□□□ -2.11
HMGB1P36-201ENST00000487709 PHOSPHO2Q8TCD6 241 aa1.85□□□□□ -2.11
HMGB1P36-201ENST00000487709 BLNKQ8WV28 456 aa1.85□□□□□ -2.11
HMGB1P36-201ENST00000487709 ZNF75AQ96N20 296 aa1.85□□□□□ -2.11
HMGB1P36-201ENST00000487709 HIGD2AQ9BW72 106 aa1.85□□□□□ -2.11
HMGB1P36-201ENST00000487709 BCL2L14Q9BZR8 327 aa1.85□□□□□ -2.11
HMGB1P36-201ENST00000487709 SLC25A31Q9H0C2 315 aa1.85□□□□□ -2.11
HMGB1P36-201ENST00000487709 UCK1Q9HA47 277 aa1.85□□□□□ -2.11
HMGB1P36-201ENST00000487709 PLEKHA1Q9HB21 404 aa1.85□□□□□ -2.11
HMGB1P36-201ENST00000487709 C1orf109Q9NX04 203 aa1.85□□□□□ -2.11
HMGB1P36-201ENST00000487709 USE1Q9NZ43 259 aa1.85□□□□□ -2.11
HMGB1P36-201ENST00000487709 MAT2BQ9NZL9 334 aa1.85□□□□□ -2.11
HMGB1P36-201ENST00000487709 ADCY9O60503 1353 aa1.85□□□□□ -2.11
HMGB1P36-201ENST00000487709 BRD4O60885 1362 aaPredicted RBP1.85□□□□□ -2.11
HMGB1P36-201ENST00000487709 ZNF407Q9C0G0 2248 aa1.85□□□□□ -2.11
HMGB1P36-201ENST00000487709 PLXNB1O43157 2135 aa1.84□□□□□ -2.11
HMGB1P36-201ENST00000487709 A0A1W2PNN7 141 aa1.84□□□□□ -2.11
HMGB1P36-201ENST00000487709 RBFOX3A6NFN3 312 aa1.84□□□□□ -2.11
HMGB1P36-201ENST00000487709 SMIM23A6NLE4 172 aa1.84□□□□□ -2.11
HMGB1P36-201ENST00000487709 I3L4J1 428 aa1.84□□□□□ -2.11
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms