RNA–Protein interactions for RNA: ENST00000483851.6

SHOX2-204, Transcript of short stature homeobox 2, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene SHOX2, Length 1,866 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHOX2-204ENST00000483851 UBQLN2Q9UHD9 624 aa22.2■■□□□ 1.14
SHOX2-204ENST00000483851 GPR132Q9UNW8 380 aa22.2■■□□□ 1.14
SHOX2-204ENST00000483851 PCNX1Q96RV3 2341 aa22.19■■□□□ 1.14
SHOX2-204ENST00000483851 VSTM5A8MXK1 200 aa22.19■■□□□ 1.14
SHOX2-204ENST00000483851 H7C1Q1 480 aa22.19■■□□□ 1.14
SHOX2-204ENST00000483851 BSPH1Q075Z2 132 aa22.19■■□□□ 1.14
SHOX2-204ENST00000483851 LPCAT3Q6P1A2 487 aa22.19■■□□□ 1.14
SHOX2-204ENST00000483851 DHRS11Q6UWP2 260 aa22.19■■□□□ 1.14
SHOX2-204ENST00000483851 OR8H3Q8N146 312 aa22.19■■□□□ 1.14
SHOX2-204ENST00000483851 DYRK2Q92630 601 aa22.19■■□□□ 1.14
SHOX2-204ENST00000483851 SYT3Q9BQG1 590 aa22.19■■□□□ 1.14
SHOX2-204ENST00000483851 ESRP2Q9H6T0 727 aaKnown RBP22.19■■□□□ 1.14
SHOX2-204ENST00000483851 CHMP1AQ9HD42 196 aaPredicted RBP22.19■■□□□ 1.14
SHOX2-204ENST00000483851 DECR2Q9NUI1 292 aa22.19■■□□□ 1.14
SHOX2-204ENST00000483851 CADP27708 2225 aa22.19■■□□□ 1.14
SHOX2-204ENST00000483851 ZSCAN5BA6NJL1 495 aa22.18■■□□□ 1.14
SHOX2-204ENST00000483851 ZNF44P15621 663 aa22.18■■□□□ 1.14
SHOX2-204ENST00000483851 PPP1R1AQ13522 171 aa22.18■■□□□ 1.14
SHOX2-204ENST00000483851 AADACL3Q5VUY0 350 aa22.18■■□□□ 1.14
SHOX2-204ENST00000483851 SLC22A25Q6T423 547 aa22.18■■□□□ 1.14
SHOX2-204ENST00000483851 TMEM185AQ8NFB2 350 aa22.18■■□□□ 1.14
SHOX2-204ENST00000483851 NEK7Q8TDX7 302 aa22.18■■□□□ 1.14
SHOX2-204ENST00000483851 MITD1Q8WV92 249 aa22.18■■□□□ 1.14
SHOX2-204ENST00000483851 Q9N2K0 584 aa22.18■■□□□ 1.14
SHOX2-204ENST00000483851 TAAR3PQ9P1P4 343 aa22.18■■□□□ 1.14
SHOX2-204ENST00000483851 NDRG3Q9UGV2 375 aa22.18■■□□□ 1.14
SHOX2-204ENST00000483851 ZDHHC8Q9ULC8 765 aa22.18■■□□□ 1.14
SHOX2-204ENST00000483851 TRAV14DV4A0A0A6YYC5 116 aa22.17■■□□□ 1.14
SHOX2-204ENST00000483851 C9orf170A2RU37 121 aa22.17■■□□□ 1.14
SHOX2-204ENST00000483851 SDCBPO00560 298 aaPredicted RBP22.17■■□□□ 1.14
SHOX2-204ENST00000483851 HLA-AP01891 365 aaKnown RBP22.17■■□□□ 1.14
SHOX2-204ENST00000483851 OR5H8P0DN80 308 aa22.17■■□□□ 1.14
SHOX2-204ENST00000483851 CD34P28906 385 aa22.17■■□□□ 1.14
SHOX2-204ENST00000483851 SORDQ00796 357 aa22.17■■□□□ 1.14
SHOX2-204ENST00000483851 PRAMEF6Q5VXH4 476 aa22.17■■□□□ 1.14
SHOX2-204ENST00000483851 C11orf88Q6PI97 169 aa22.17■■□□□ 1.14
SHOX2-204ENST00000483851 MARCH1Q8TCQ1 289 aa22.17■■□□□ 1.14
SHOX2-204ENST00000483851 KIR2DS1A0A191URI9 304 aa22.17■■□□□ 1.14
SHOX2-204ENST00000483851 RFPL4AA6NLU0 287 aa22.17■■□□□ 1.14
SHOX2-204ENST00000483851 RFPL4AL1F8VTS6 287 aa22.17■■□□□ 1.14
SHOX2-204ENST00000483851 LMO1P25800 156 aa22.17■■□□□ 1.14
SHOX2-204ENST00000483851 S100A11P31949 105 aa22.17■■□□□ 1.14
SHOX2-204ENST00000483851 KIR2DS4P43632 304 aa22.17■■□□□ 1.14
SHOX2-204ENST00000483851 GATA4P43694 442 aa22.17■■□□□ 1.14
SHOX2-204ENST00000483851 ADORA2A-AS1P86434 159 aa22.17■■□□□ 1.14
SHOX2-204ENST00000483851 KIR2DS1Q14954 304 aa22.17■■□□□ 1.14
SHOX2-204ENST00000483851 ESCO2Q56NI9 601 aa22.17■■□□□ 1.14
SHOX2-204ENST00000483851 ZNF660Q6AZW8 331 aaPredicted RBP22.17■■□□□ 1.14
SHOX2-204ENST00000483851 FAM90A1Q86YD7 464 aa22.17■■□□□ 1.14
SHOX2-204ENST00000483851 PRR7Q8TB68 274 aa22.17■■□□□ 1.14
SHOX2-204ENST00000483851 SEBOXQ9HB31 216 aaPredicted RBP22.17■■□□□ 1.14
SHOX2-204ENST00000483851 MAB21L2Q9Y586 359 aa22.17■■□□□ 1.14
SHOX2-204ENST00000483851 FAM221AA4D161 298 aa22.16■■□□□ 1.14
SHOX2-204ENST00000483851 OR2H2O95918 312 aa22.16■■□□□ 1.14
SHOX2-204ENST00000483851 KNG1P01042 644 aa22.16■■□□□ 1.14
SHOX2-204ENST00000483851 ACP7Q6ZNF0 438 aa22.16■■□□□ 1.14
SHOX2-204ENST00000483851 TMUB2Q71RG4 321 aa22.16■■□□□ 1.14
SHOX2-204ENST00000483851 HS3ST1O14792 307 aa22.15■■□□□ 1.14
SHOX2-204ENST00000483851 ARPC5O15511 151 aa22.15■■□□□ 1.14
SHOX2-204ENST00000483851 GLRA1P23415 457 aa22.15■■□□□ 1.14
SHOX2-204ENST00000483851 SMIM21Q3B7S5 101 aa22.15■■□□□ 1.14
SHOX2-204ENST00000483851 NCMAPQ5T1S8 102 aa22.15■■□□□ 1.14
SHOX2-204ENST00000483851 ZNF826PQ6ZT77 177 aa22.15■■□□□ 1.14
SHOX2-204ENST00000483851 ADAD2Q8NCV1 583 aaKnown RBP22.15■■□□□ 1.14
SHOX2-204ENST00000483851 MEGF10Q96KG7 1140 aa22.15■■□□□ 1.14
SHOX2-204ENST00000483851 DIRC2Q96SL1 478 aa22.15■■□□□ 1.14
SHOX2-204ENST00000483851 TUBAL3A6NHL2 446 aa22.15■■□□□ 1.14
SHOX2-204ENST00000483851 IFNL4K9M1U5 179 aa22.15■■□□□ 1.14
SHOX2-204ENST00000483851 SLC33A1O00400 549 aaPredicted RBP22.15■■□□□ 1.14
SHOX2-204ENST00000483851 RPA2P15927 270 aa22.15■■□□□ 1.14
SHOX2-204ENST00000483851 NPY4RP50391 375 aa22.15■■□□□ 1.14
SHOX2-204ENST00000483851 GMFBP60983 142 aa22.15■■□□□ 1.14
SHOX2-204ENST00000483851 PAN3Q58A45 887 aaKnown RBP22.15■■□□□ 1.14
SHOX2-204ENST00000483851 TMEM128Q5BJH2 165 aa22.15■■□□□ 1.14
SHOX2-204ENST00000483851 ZNF880Q6PDB4 577 aa22.15■■□□□ 1.14
SHOX2-204ENST00000483851 GAPTQ8N292 157 aa22.15■■□□□ 1.14
SHOX2-204ENST00000483851 RDH5Q92781 318 aa22.15■■□□□ 1.14
SHOX2-204ENST00000483851 CITED4Q96RK1 184 aa22.15■■□□□ 1.14
SHOX2-204ENST00000483851 WDR13Q9H1Z4 485 aa22.15■■□□□ 1.14
SHOX2-204ENST00000483851 C1orf123Q9NWV4 160 aa22.15■■□□□ 1.14
SHOX2-204ENST00000483851 IL19Q9UHD0 177 aa22.15■■□□□ 1.14
SHOX2-204ENST00000483851 ERRFI1Q9UJM3 462 aaPredicted RBP22.15■■□□□ 1.14
SHOX2-204ENST00000483851 ATP23Q9Y6H3 246 aa22.15■■□□□ 1.14
SHOX2-204ENST00000483851 HAND1O96004 215 aa22.14■■□□□ 1.13
SHOX2-204ENST00000483851 ADH4P08319 380 aa22.14■■□□□ 1.13
SHOX2-204ENST00000483851 CTXN2P0C2S0 81 aa22.14■■□□□ 1.13
SHOX2-204ENST00000483851 TNFSF4P23510 183 aa22.14■■□□□ 1.13
SHOX2-204ENST00000483851 Q6ZPA2 131 aa22.14■■□□□ 1.13
SHOX2-204ENST00000483851 MOB1BQ7L9L4 216 aa22.14■■□□□ 1.13
SHOX2-204ENST00000483851 ERGIC1Q969X5 290 aa22.14■■□□□ 1.13
SHOX2-204ENST00000483851 ZNF2Q9BSG1 426 aaPredicted RBP22.14■■□□□ 1.13
SHOX2-204ENST00000483851 UFSP2Q9NUQ7 469 aa22.14■■□□□ 1.13
SHOX2-204ENST00000483851 FXYD6-FXYD2A0A087WZ82 144 aa22.13■■□□□ 1.13
SHOX2-204ENST00000483851 OR5H14A6NHG9 310 aa22.13■■□□□ 1.13
SHOX2-204ENST00000483851 TMEM65Q6PI78 240 aa22.13■■□□□ 1.13
SHOX2-204ENST00000483851 MRPL30Q8TCC3 161 aaKnown RBP22.13■■□□□ 1.13
SHOX2-204ENST00000483851 OR2V2Q96R30 315 aa22.13■■□□□ 1.13
SHOX2-204ENST00000483851 GSX2Q9BZM3 304 aa22.13■■□□□ 1.13
SHOX2-204ENST00000483851 FXYD6Q9H0Q3 95 aa22.13■■□□□ 1.13
SHOX2-204ENST00000483851 C5orf66Q9H5L9 145 aa22.13■■□□□ 1.13
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms