RNA–Protein interactions for RNA: ENST00000481409.1

USP39-215, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 3

Gene USP39, Length 447 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-215ENST00000481409 CD80P33681 288 aa8.49□□□□□ -1.05
USP39-215ENST00000481409 CDKN1AP38936 164 aa8.49□□□□□ -1.05
USP39-215ENST00000481409 PDLIM4P50479 330 aa8.49□□□□□ -1.05
USP39-215ENST00000481409 SNU13P55769 128 aaKnown RBP8.49□□□□□ -1.05
USP39-215ENST00000481409 CR1LQ2VPA4 569 aa8.49□□□□□ -1.05
USP39-215ENST00000481409 TMEM30BQ3MIR4 351 aa8.49□□□□□ -1.05
USP39-215ENST00000481409 LRRC10Q5BKY1 277 aa8.49□□□□□ -1.05
USP39-215ENST00000481409 C6orf183Q5T699 404 aa8.49□□□□□ -1.05
USP39-215ENST00000481409 STEAP3Q658P3 488 aa8.49□□□□□ -1.05
USP39-215ENST00000481409 ZNF57Q68EA5 555 aaPredicted RBP8.49□□□□□ -1.05
USP39-215ENST00000481409 SFRP4Q6FHJ7 346 aaPredicted RBP8.49□□□□□ -1.05
USP39-215ENST00000481409 ZNF880Q6PDB4 577 aa8.49□□□□□ -1.05
USP39-215ENST00000481409 C17orf107Q6ZR85 190 aa8.49□□□□□ -1.05
USP39-215ENST00000481409 NLRC3Q7RTR2 1065 aa8.49□□□□□ -1.05
USP39-215ENST00000481409 BATF2Q8N1L9 274 aa8.49□□□□□ -1.05
USP39-215ENST00000481409 DTX3Q8N9I9 347 aa8.49□□□□□ -1.05
USP39-215ENST00000481409 ASCC1Q8N9N2 400 aaKnown RBP8.49□□□□□ -1.05
USP39-215ENST00000481409 BOLLQ8N9W6 283 aaKnown RBP8.49□□□□□ -1.05
USP39-215ENST00000481409 FAM216AQ8WUB2 273 aa8.49□□□□□ -1.05
USP39-215ENST00000481409 NUDCD2Q8WVJ2 157 aa8.49□□□□□ -1.05
USP39-215ENST00000481409 GAFA1Q96PS6 74 aa8.49□□□□□ -1.05
USP39-215ENST00000481409 SHARPINQ9H0F6 387 aa8.49□□□□□ -1.05
USP39-215ENST00000481409 MBNL3Q9NUK0 354 aaKnown RBP8.49□□□□□ -1.05
USP39-215ENST00000481409 OR6C3Q9NZP0 311 aa8.49□□□□□ -1.05
USP39-215ENST00000481409 COPZ2Q9P299 210 aa8.49□□□□□ -1.05
USP39-215ENST00000481409 FLNCQ14315 2725 aa8.49□□□□□ -1.05
USP39-215ENST00000481409 UBE2QL1A1L167 161 aa8.48□□□□□ -1.05
USP39-215ENST00000481409 ZNF736B4DX44 427 aaPredicted RBP8.48□□□□□ -1.05
USP39-215ENST00000481409 NDUFB3O43676 98 aa8.48□□□□□ -1.05
USP39-215ENST00000481409 PSPNO60542 156 aa8.48□□□□□ -1.05
USP39-215ENST00000481409 MT-ND4P03905 459 aa8.48□□□□□ -1.05
USP39-215ENST00000481409 AKAIN1P0CW23 69 aa8.48□□□□□ -1.05
USP39-215ENST00000481409 GZMHP20718 246 aa8.48□□□□□ -1.05
USP39-215ENST00000481409 DNASE1P24855 282 aa8.48□□□□□ -1.05
USP39-215ENST00000481409 GPR6P46095 362 aaPredicted RBP8.48□□□□□ -1.05
USP39-215ENST00000481409 OR3A1P47881 315 aa8.48□□□□□ -1.05
USP39-215ENST00000481409 GMFBP60983 142 aa8.48□□□□□ -1.05
USP39-215ENST00000481409 MEF2CQ06413 473 aaPredicted RBP8.48□□□□□ -1.05
USP39-215ENST00000481409 KLF9Q13886 244 aaPredicted RBP8.48□□□□□ -1.05
USP39-215ENST00000481409 GRK1Q15835 563 aa8.48□□□□□ -1.05
USP39-215ENST00000481409 RGS21Q2M5E4 152 aa8.48□□□□□ -1.05
USP39-215ENST00000481409 KRBOX4Q5JUW0 171 aa8.48□□□□□ -1.05
USP39-215ENST00000481409 VAX1Q5SQQ9 334 aa8.48□□□□□ -1.05
USP39-215ENST00000481409 RSBN1Q5VWQ0 802 aaPredicted RBP8.48□□□□□ -1.05
USP39-215ENST00000481409 OLFML2AQ68BL7 652 aa8.48□□□□□ -1.05
USP39-215ENST00000481409 GDPD3Q7L5L3 318 aa8.48□□□□□ -1.05
USP39-215ENST00000481409 TMEM17Q86X19 198 aa8.48□□□□□ -1.05
USP39-215ENST00000481409 ARRDC1Q8N5I2 433 aa8.48□□□□□ -1.05
USP39-215ENST00000481409 ZNF565Q8N9K5 539 aa8.48□□□□□ -1.05
USP39-215ENST00000481409 BEST4Q8NFU0 473 aa8.48□□□□□ -1.05
USP39-215ENST00000481409 OR5AP2Q8NGF4 316 aa8.48□□□□□ -1.05
USP39-215ENST00000481409 OR5T2Q8NGG2 359 aa8.48□□□□□ -1.05
USP39-215ENST00000481409 MBD6Q96DN6 1003 aa8.48□□□□□ -1.05
USP39-215ENST00000481409 LURAP1Q96LR2 239 aa8.48□□□□□ -1.05
USP39-215ENST00000481409 TMEM246Q9BRR3 403 aa8.48□□□□□ -1.05
USP39-215ENST00000481409 CHMP1AQ9HD42 196 aaPredicted RBP8.48□□□□□ -1.05
USP39-215ENST00000481409 Q9N2K0 584 aa8.48□□□□□ -1.05
USP39-215ENST00000481409 KCNIP1Q9NZI2 227 aa8.48□□□□□ -1.05
USP39-215ENST00000481409 MAB21L2Q9Y586 359 aa8.48□□□□□ -1.05
USP39-215ENST00000481409 CACNG2Q9Y698 323 aa8.48□□□□□ -1.05
USP39-215ENST00000481409 IGHV3OR15-7A0A075B7D8 119 aa8.47□□□□□ -1.05
USP39-215ENST00000481409 TRBV23-1A0A0A0MS06 115 aa8.47□□□□□ -1.05
USP39-215ENST00000481409 A0A1W2PPH5 198 aa8.47□□□□□ -1.05
USP39-215ENST00000481409 TMEM82A0PJX8 343 aa8.47□□□□□ -1.05
USP39-215ENST00000481409 TRDCB7Z8K6 153 aa8.47□□□□□ -1.05
USP39-215ENST00000481409 TMPRSS2O15393 492 aa8.47□□□□□ -1.05
USP39-215ENST00000481409 LYRM1O43325 122 aa8.47□□□□□ -1.05
USP39-215ENST00000481409 PPIHO43447 177 aaKnown RBP8.47□□□□□ -1.05
USP39-215ENST00000481409 GYPAP02724 150 aa8.47□□□□□ -1.05
USP39-215ENST00000481409 PTHLHP12272 177 aa8.47□□□□□ -1.05
USP39-215ENST00000481409 ECI1P42126 302 aa8.47□□□□□ -1.05
USP39-215ENST00000481409 P2RX3P56373 397 aa8.47□□□□□ -1.05
USP39-215ENST00000481409 IFITM3Q01628 133 aa8.47□□□□□ -1.05
USP39-215ENST00000481409 GUCA2AQ02747 115 aa8.47□□□□□ -1.05
USP39-215ENST00000481409 PDCD1Q15116 288 aa8.47□□□□□ -1.05
USP39-215ENST00000481409 RNASE10Q5GAN6 216 aaKnown RBP8.47□□□□□ -1.05
USP39-215ENST00000481409 STEAP1BQ6NZ63 245 aa8.47□□□□□ -1.05
USP39-215ENST00000481409 CLEC2AQ6UVW9 174 aa8.47□□□□□ -1.05
USP39-215ENST00000481409 BPIFB2Q8N4F0 458 aa8.47□□□□□ -1.05
USP39-215ENST00000481409 POC5Q8NA72 575 aa8.47□□□□□ -1.05
USP39-215ENST00000481409 OR4S1Q8NGB4 309 aa8.47□□□□□ -1.05
USP39-215ENST00000481409 OR8B3Q8NGG8 313 aa8.47□□□□□ -1.05
USP39-215ENST00000481409 OR4A4PQ8NGN8 299 aa8.47□□□□□ -1.05
USP39-215ENST00000481409 OR4K15Q8NH41 348 aa8.47□□□□□ -1.05
USP39-215ENST00000481409 MRPL30Q8TCC3 161 aaKnown RBP8.47□□□□□ -1.05
USP39-215ENST00000481409 CORO2AQ92828 525 aa8.47□□□□□ -1.05
USP39-215ENST00000481409 NEIL1Q96FI4 390 aaPredicted RBP8.47□□□□□ -1.05
USP39-215ENST00000481409 OR8B2Q96RD0 313 aa8.47□□□□□ -1.05
USP39-215ENST00000481409 PRRT1Q99946 306 aa8.47□□□□□ -1.05
USP39-215ENST00000481409 PIMREGQ9BSJ6 248 aa8.47□□□□□ -1.05
USP39-215ENST00000481409 ST6GALNAC5Q9BVH7 336 aa8.47□□□□□ -1.05
USP39-215ENST00000481409 PPA2Q9H2U2 334 aa8.47□□□□□ -1.05
USP39-215ENST00000481409 NECAP2Q9NVZ3 263 aa8.47□□□□□ -1.05
USP39-215ENST00000481409 SLC2A8Q9NY64 477 aa8.47□□□□□ -1.05
USP39-215ENST00000481409 SLC25A10Q9UBX3 287 aaPredicted RBP8.47□□□□□ -1.05
USP39-215ENST00000481409 SLC23A1Q9UHI7 598 aa8.47□□□□□ -1.05
USP39-215ENST00000481409 ANXA10Q9UJ72 324 aa8.47□□□□□ -1.05
USP39-215ENST00000481409 SCP2D1Q9UJQ7 156 aa8.47□□□□□ -1.05
USP39-215ENST00000481409 TRAPPC2LQ9UL33 140 aa8.47□□□□□ -1.05
USP39-215ENST00000481409 PCDHB10Q9UN67 800 aa8.47□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms