RNA–Protein interactions for RNA: ENST00000481131.5

UPF3A-207, Transcript of UPF3A, regulator of nonsense mediated mRNA decay, humanhuman

TSL 3

Gene UPF3A, Length 678 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3A-207ENST00000481131 MMACHCQ9Y4U1 282 aa3.3□□□□□ -1.88
UPF3A-207ENST00000481131 PRRC2CQ9Y520 2896 aaKnown RBP3.3□□□□□ -1.88
UPF3A-207ENST00000481131 KIAA1549Q9HCM3 1950 aa3.29□□□□□ -1.88
UPF3A-207ENST00000481131 H0YHG0 523 aa3.29□□□□□ -1.88
UPF3A-207ENST00000481131 MKRN2OSH3BPM6 223 aa3.29□□□□□ -1.88
UPF3A-207ENST00000481131 SIRPB1O00241 398 aa3.29□□□□□ -1.88
UPF3A-207ENST00000481131 SCAMP2O15127 329 aaKnown RBP3.29□□□□□ -1.88
UPF3A-207ENST00000481131 CTNSO60931 367 aa3.29□□□□□ -1.88
UPF3A-207ENST00000481131 GPR75O95800 540 aa3.29□□□□□ -1.88
UPF3A-207ENST00000481131 C1QCP02747 245 aa3.29□□□□□ -1.88
UPF3A-207ENST00000481131 SERPINA7P05543 415 aa3.29□□□□□ -1.88
UPF3A-207ENST00000481131 GNAO1P09471 354 aa3.29□□□□□ -1.88
UPF3A-207ENST00000481131 ACSM4P0C7M7 580 aa3.29□□□□□ -1.88
UPF3A-207ENST00000481131 SFTPCP11686 197 aa3.29□□□□□ -1.88
UPF3A-207ENST00000481131 CPMP14384 443 aa3.29□□□□□ -1.88
UPF3A-207ENST00000481131 XKP51811 444 aa3.29□□□□□ -1.88
UPF3A-207ENST00000481131 CRISP1P54107 249 aa3.29□□□□□ -1.88
UPF3A-207ENST00000481131 RGS8P57771 180 aaPredicted RBP3.29□□□□□ -1.88
UPF3A-207ENST00000481131 ADARB1P78563 741 aaKnown RBP3.29□□□□□ -1.88
UPF3A-207ENST00000481131 MXD1Q05195 221 aa3.29□□□□□ -1.88
UPF3A-207ENST00000481131 LIPEQ05469 1076 aa3.29□□□□□ -1.88
UPF3A-207ENST00000481131 NNATQ16517 81 aa3.29□□□□□ -1.88
UPF3A-207ENST00000481131 ATP6AP1LQ52LC2 224 aa3.29□□□□□ -1.88
UPF3A-207ENST00000481131 TRMT12Q53H54 448 aaKnown RBP3.29□□□□□ -1.88
UPF3A-207ENST00000481131 C1orf185Q5T7R7 199 aa3.29□□□□□ -1.88
UPF3A-207ENST00000481131 NIPAL1Q6NVV3 410 aa3.29□□□□□ -1.88
UPF3A-207ENST00000481131 DUX4L9Q6RFH8 374 aaPredicted RBP3.29□□□□□ -1.88
UPF3A-207ENST00000481131 BIVMQ86UB2 503 aa3.29□□□□□ -1.88
UPF3A-207ENST00000481131 CMTM1Q8IZ96 169 aa3.29□□□□□ -1.88
UPF3A-207ENST00000481131 ZFP41Q8N8Y5 198 aa3.29□□□□□ -1.88
UPF3A-207ENST00000481131 DUSP18Q8NEJ0 188 aa3.29□□□□□ -1.88
UPF3A-207ENST00000481131 OR9A2Q8NGT5 310 aa3.29□□□□□ -1.88
UPF3A-207ENST00000481131 ZNF721Q8TF20 911 aa3.29□□□□□ -1.88
UPF3A-207ENST00000481131 FAM3DQ96BQ1 224 aa3.29□□□□□ -1.88
UPF3A-207ENST00000481131 TEX37Q96LM6 180 aa3.29□□□□□ -1.88
UPF3A-207ENST00000481131 ZNF681Q96N22 645 aa3.29□□□□□ -1.88
UPF3A-207ENST00000481131 IP6K3Q96PC2 410 aa3.29□□□□□ -1.88
UPF3A-207ENST00000481131 OR5B12Q96R08 314 aa3.29□□□□□ -1.88
UPF3A-207ENST00000481131 TRIM4Q9C037 500 aa3.29□□□□□ -1.88
UPF3A-207ENST00000481131 EXO5Q9H790 373 aa3.29□□□□□ -1.88
UPF3A-207ENST00000481131 CXorf21Q9HAI6 301 aa3.29□□□□□ -1.88
UPF3A-207ENST00000481131 KCNJ16Q9NPI9 418 aa3.29□□□□□ -1.88
UPF3A-207ENST00000481131 AHSPQ9NZD4 102 aa3.29□□□□□ -1.88
UPF3A-207ENST00000481131 MAT2BQ9NZL9 334 aa3.29□□□□□ -1.88
UPF3A-207ENST00000481131 TMED5Q9Y3A6 229 aa3.29□□□□□ -1.88
UPF3A-207ENST00000481131 GOLT1BQ9Y3E0 138 aa3.29□□□□□ -1.88
UPF3A-207ENST00000481131 USH1CQ9Y6N9 552 aa3.29□□□□□ -1.88
UPF3A-207ENST00000481131 ZNF407Q9C0G0 2248 aa3.29□□□□□ -1.88
UPF3A-207ENST00000481131 MED12Q93074 2177 aa3.29□□□□□ -1.88
UPF3A-207ENST00000481131 HEATR5AQ86XA9 2040 aa3.29□□□□□ -1.88
UPF3A-207ENST00000481131 ARHGAP21Q5T5U3 1957 aa3.29□□□□□ -1.88
UPF3A-207ENST00000481131 DNAJC13O75165 2243 aa3.28□□□□□ -1.88
UPF3A-207ENST00000481131 MPDZO75970 2070 aa3.28□□□□□ -1.88
UPF3A-207ENST00000481131 SPTA1P02549 2419 aa3.28□□□□□ -1.88
UPF3A-207ENST00000481131 NBASA2RRP1 2371 aa3.28□□□□□ -1.88
UPF3A-207ENST00000481131 IGLV2-33A0A075B6J2 118 aaPredicted RBP3.28□□□□□ -1.88
UPF3A-207ENST00000481131 A0A096LNJ9 63 aa3.28□□□□□ -1.88
UPF3A-207ENST00000481131 TRBV9A0A0B4J1U6 114 aa3.28□□□□□ -1.88
UPF3A-207ENST00000481131 A0A0G2JMM0 328 aa3.28□□□□□ -1.88
UPF3A-207ENST00000481131 A0A1W2PPB8 328 aa3.28□□□□□ -1.88
UPF3A-207ENST00000481131 A0A1W2PRS3 328 aa3.28□□□□□ -1.88
UPF3A-207ENST00000481131 GABRR3A8MPY1 467 aa3.28□□□□□ -1.88
UPF3A-207ENST00000481131 C17orf51A8MQB3 221 aa3.28□□□□□ -1.88
UPF3A-207ENST00000481131 KIR3DP1A8MWS1 328 aa3.28□□□□□ -1.88
UPF3A-207ENST00000481131 EDF1O60869 148 aaKnown RBP3.28□□□□□ -1.88
UPF3A-207ENST00000481131 OR2J2O76002 312 aa3.28□□□□□ -1.88
UPF3A-207ENST00000481131 IGKV3-11P04433 115 aa3.28□□□□□ -1.88
UPF3A-207ENST00000481131 AZU1P20160 251 aa3.28□□□□□ -1.88
UPF3A-207ENST00000481131 OMGP23515 440 aa3.28□□□□□ -1.88
UPF3A-207ENST00000481131 MAS1LP35410 378 aa3.28□□□□□ -1.88
UPF3A-207ENST00000481131 GPX4P36969 197 aaPredicted RBP3.28□□□□□ -1.88
UPF3A-207ENST00000481131 RFC3P40938 356 aa3.28□□□□□ -1.88
UPF3A-207ENST00000481131 CDK9P50750 372 aaKnown RBP3.28□□□□□ -1.88
UPF3A-207ENST00000481131 AQP5P55064 265 aa3.28□□□□□ -1.88
UPF3A-207ENST00000481131 MLF1P58340 268 aa3.28□□□□□ -1.88
UPF3A-207ENST00000481131 MERTKQ12866 999 aa3.28□□□□□ -1.88
UPF3A-207ENST00000481131 EBPQ15125 230 aaKnown RBP3.28□□□□□ -1.88
UPF3A-207ENST00000481131 HSP90B2PQ58FF3 399 aa3.28□□□□□ -1.88
UPF3A-207ENST00000481131 H3F3CQ6NXT2 135 aa3.28□□□□□ -1.88
UPF3A-207ENST00000481131 Q6P435 159 aa3.28□□□□□ -1.88
UPF3A-207ENST00000481131 NPSR1Q6W5P4 371 aa3.28□□□□□ -1.88
UPF3A-207ENST00000481131 TEX43Q6ZNM6 134 aa3.28□□□□□ -1.88
UPF3A-207ENST00000481131 GALNT10Q86SR1 603 aa3.28□□□□□ -1.88
UPF3A-207ENST00000481131 LUZP2Q86TE4 346 aa3.28□□□□□ -1.88
UPF3A-207ENST00000481131 RIMKLAQ8IXN7 391 aa3.28□□□□□ -1.88
UPF3A-207ENST00000481131 LRRC34Q8IZ02 419 aa3.28□□□□□ -1.88
UPF3A-207ENST00000481131 ST13P4Q8IZP2 240 aaPredicted RBP3.28□□□□□ -1.88
UPF3A-207ENST00000481131 CLECL1Q8IZS7 167 aa3.28□□□□□ -1.88
UPF3A-207ENST00000481131 LRRC25Q8N386 305 aaPredicted RBP3.28□□□□□ -1.88
UPF3A-207ENST00000481131 ZNF615Q8N8J6 731 aa3.28□□□□□ -1.88
UPF3A-207ENST00000481131 OR9I1Q8NGQ6 314 aa3.28□□□□□ -1.88
UPF3A-207ENST00000481131 OR5AK3PQ8NH89 298 aa3.28□□□□□ -1.88
UPF3A-207ENST00000481131 MARCH1Q8TCQ1 289 aa3.28□□□□□ -1.88
UPF3A-207ENST00000481131 CAPSLQ8WWF8 208 aa3.28□□□□□ -1.88
UPF3A-207ENST00000481131 PPP3R2Q96LZ3 170 aa3.28□□□□□ -1.88
UPF3A-207ENST00000481131 TMEM165Q9HC07 324 aa3.28□□□□□ -1.88
UPF3A-207ENST00000481131 FGFR1OP2Q9NVK5 253 aa3.28□□□□□ -1.88
UPF3A-207ENST00000481131 MS4A12Q9NXJ0 267 aa3.28□□□□□ -1.88
UPF3A-207ENST00000481131 RABL2AQ9UBK7 228 aaPredicted RBP3.28□□□□□ -1.88
UPF3A-207ENST00000481131 ZNF629Q9UEG4 869 aaPredicted RBP3.28□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 55.1 ms