RNA–Protein interactions for RNA: ENST00000478423.6

NPHP4-208, Transcript of nephrocystin 4, humanhuman

TSL 2

Gene NPHP4, Length 4,467 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP4-208ENST00000478423 UQCC1Q9NVA1 299 aa12.39□□□□□ -0.43
NPHP4-208ENST00000478423 ABCA4P78363 2273 aa12.39□□□□□ -0.43
NPHP4-208ENST00000478423 SLC25A4P12235 298 aa12.39□□□□□ -0.43
NPHP4-208ENST00000478423 TMEM11P17152 192 aa12.39□□□□□ -0.43
NPHP4-208ENST00000478423 TBC1D26Q86UD7 250 aa12.39□□□□□ -0.43
NPHP4-208ENST00000478423 SLC25A38Q96DW6 304 aa12.39□□□□□ -0.43
NPHP4-208ENST00000478423 TCEAL7Q9BRU2 100 aa12.39□□□□□ -0.43
NPHP4-208ENST00000478423 CCL28Q9NRJ3 127 aa12.39□□□□□ -0.43
NPHP4-208ENST00000478423 MYO7BQ6PIF6 2116 aa12.39□□□□□ -0.43
NPHP4-208ENST00000478423 ST8SIA5O15466 376 aa12.39□□□□□ -0.43
NPHP4-208ENST00000478423 ADAM11O75078 769 aa12.39□□□□□ -0.43
NPHP4-208ENST00000478423 VDAC1P21796 283 aa12.39□□□□□ -0.43
NPHP4-208ENST00000478423 GAPTQ8N292 157 aa12.39□□□□□ -0.43
NPHP4-208ENST00000478423 MITD1Q8WV92 249 aa12.39□□□□□ -0.43
NPHP4-208ENST00000478423 NTNG2Q96CW9 530 aa12.39□□□□□ -0.43
NPHP4-208ENST00000478423 FAM96BQ9Y3D0 163 aa12.39□□□□□ -0.43
NPHP4-208ENST00000478423 FREM3P0C091 2139 aa12.39□□□□□ -0.43
NPHP4-208ENST00000478423 OR10J4P0C629 311 aa12.39□□□□□ -0.43
NPHP4-208ENST00000478423 TMEM267Q0VDI3 215 aaPredicted RBP12.39□□□□□ -0.43
NPHP4-208ENST00000478423 FOXJ2Q9P0K8 574 aa12.39□□□□□ -0.43
NPHP4-208ENST00000478423 OSGIN2Q9Y236 505 aa12.39□□□□□ -0.43
NPHP4-208ENST00000478423 C7orf66A4D0T2 115 aa12.38□□□□□ -0.43
NPHP4-208ENST00000478423 C16orf97H3BN30 126 aa12.38□□□□□ -0.43
NPHP4-208ENST00000478423 RAMP1O60894 148 aa12.38□□□□□ -0.43
NPHP4-208ENST00000478423 OR2C1O95371 312 aa12.38□□□□□ -0.43
NPHP4-208ENST00000478423 TMEM33P57088 247 aa12.38□□□□□ -0.43
NPHP4-208ENST00000478423 RPL11P62913 178 aaKnown RBP12.38□□□□□ -0.43
NPHP4-208ENST00000478423 VMA21Q3ZAQ7 101 aa12.38□□□□□ -0.43
NPHP4-208ENST00000478423 ZNF658BQ4V348 819 aaPredicted RBP12.38□□□□□ -0.43
NPHP4-208ENST00000478423 TPPP3Q9BW30 176 aa12.38□□□□□ -0.43
NPHP4-208ENST00000478423 LPAR5Q9H1C0 372 aa12.38□□□□□ -0.43
NPHP4-208ENST00000478423 ISG15P05161 165 aa12.38□□□□□ -0.43
NPHP4-208ENST00000478423 RAB7AP51149 207 aa12.38□□□□□ -0.43
NPHP4-208ENST00000478423 MIDNQ504T8 468 aa12.38□□□□□ -0.43
NPHP4-208ENST00000478423 RPL7L1Q6DKI1 246 aaKnown RBP12.38□□□□□ -0.43
NPHP4-208ENST00000478423 LIAT1Q6ZQX7 453 aa12.38□□□□□ -0.43
NPHP4-208ENST00000478423 SAP30LQ9HAJ7 183 aa12.38□□□□□ -0.43
NPHP4-208ENST00000478423 GNB4Q9HAV0 340 aa12.38□□□□□ -0.43
NPHP4-208ENST00000478423 PRSS50Q9UI38 385 aa12.38□□□□□ -0.43
NPHP4-208ENST00000478423 WDR81Q562E7 1941 aa12.38□□□□□ -0.43
NPHP4-208ENST00000478423 TMEM229AB2RXF0 380 aa12.38□□□□□ -0.43
NPHP4-208ENST00000478423 UBE2G1P62253 170 aa12.38□□□□□ -0.43
NPHP4-208ENST00000478423 FLI1Q01543 452 aaPredicted RBP12.38□□□□□ -0.43
NPHP4-208ENST00000478423 ZNF528Q3MIS6 628 aa12.38□□□□□ -0.43
NPHP4-208ENST00000478423 MOGAT2Q3SYC2 334 aa12.38□□□□□ -0.43
NPHP4-208ENST00000478423 SEZ6L2Q6UXD5 910 aa12.38□□□□□ -0.43
NPHP4-208ENST00000478423 GAL3ST2Q9H3Q3 398 aa12.38□□□□□ -0.43
NPHP4-208ENST00000478423 MTCH1Q9NZJ7 389 aa12.38□□□□□ -0.43
NPHP4-208ENST00000478423 KLK13Q9UKR3 277 aa12.38□□□□□ -0.43
NPHP4-208ENST00000478423 PPP5D1E7EU14 171 aa12.37□□□□□ -0.43
NPHP4-208ENST00000478423 TRIM77I1YAP6 450 aa12.37□□□□□ -0.43
NPHP4-208ENST00000478423 K7ESF4 209 aa12.37□□□□□ -0.43
NPHP4-208ENST00000478423 CYTIPO60759 359 aa12.37□□□□□ -0.43
NPHP4-208ENST00000478423 IL13RA2Q14627 380 aa12.37□□□□□ -0.43
NPHP4-208ENST00000478423 HOGA1Q86XE5 327 aa12.37□□□□□ -0.43
NPHP4-208ENST00000478423 RPEQ96AT9 228 aa12.37□□□□□ -0.43
NPHP4-208ENST00000478423 SOX7Q9BT81 388 aa12.37□□□□□ -0.43
NPHP4-208ENST00000478423 IL36GQ9NZH8 169 aa12.37□□□□□ -0.43
NPHP4-208ENST00000478423 DOCK7Q96N67 2140 aa12.37□□□□□ -0.43
NPHP4-208ENST00000478423 TRAV38-1A0A0B4J264 116 aa12.37□□□□□ -0.43
NPHP4-208ENST00000478423 LOC101059948A0A1B0GTJ6 334 aa12.37□□□□□ -0.43
NPHP4-208ENST00000478423 MED19A0JLT2 244 aaPredicted RBP12.37□□□□□ -0.43
NPHP4-208ENST00000478423 PRSS44E7EML9 344 aa12.37□□□□□ -0.43
NPHP4-208ENST00000478423 GZMHP20718 246 aa12.37□□□□□ -0.43
NPHP4-208ENST00000478423 OR2B8PP59922 312 aa12.37□□□□□ -0.43
NPHP4-208ENST00000478423 ADAD2Q8NCV1 583 aaKnown RBP12.37□□□□□ -0.43
NPHP4-208ENST00000478423 MRPL24Q96A35 216 aaKnown RBP12.37□□□□□ -0.43
NPHP4-208ENST00000478423 TRBV5-7A0A0A0MS05 114 aa12.37□□□□□ -0.43
NPHP4-208ENST00000478423 PMELP40967 661 aa12.37□□□□□ -0.43
NPHP4-208ENST00000478423 SSTP61278 116 aa12.37□□□□□ -0.43
NPHP4-208ENST00000478423 SLC38A11Q08AI6 406 aa12.37□□□□□ -0.43
NPHP4-208ENST00000478423 HABP2Q14520 560 aaPredicted RBP12.37□□□□□ -0.43
NPHP4-208ENST00000478423 TIGITQ495A1 244 aa12.37□□□□□ -0.43
NPHP4-208ENST00000478423 C1orf100Q5SVJ3 147 aa12.37□□□□□ -0.43
NPHP4-208ENST00000478423 ZNF426Q9BUY5 554 aa12.37□□□□□ -0.43
NPHP4-208ENST00000478423 SRXN1Q9BYN0 137 aa12.37□□□□□ -0.43
NPHP4-208ENST00000478423 CHCHD2Q9Y6H1 151 aaPredicted RBP12.37□□□□□ -0.43
NPHP4-208ENST00000478423 K7EQM0 130 aa12.37□□□□□ -0.43
NPHP4-208ENST00000478423 CA11O75493 328 aa12.37□□□□□ -0.43
NPHP4-208ENST00000478423 RFPL3SP0C7P2 107 aa12.37□□□□□ -0.43
NPHP4-208ENST00000478423 COX7A1P24310 79 aa12.37□□□□□ -0.43
NPHP4-208ENST00000478423 RBM11P57052 281 aaKnown RBP12.37□□□□□ -0.43
NPHP4-208ENST00000478423 KIAA0141Q14154 515 aaPredicted RBP12.37□□□□□ -0.43
NPHP4-208ENST00000478423 UNQ9370/PRO34162Q6UXP9 181 aa12.37□□□□□ -0.43
NPHP4-208ENST00000478423 TVP23CQ96ET8 276 aa12.37□□□□□ -0.43
NPHP4-208ENST00000478423 ONECUT1Q9UBC0 465 aa12.37□□□□□ -0.43
NPHP4-208ENST00000478423 ACP1P24666 158 aa12.36□□□□□ -0.43
NPHP4-208ENST00000478423 NDUFA6P56556 154 aa12.36□□□□□ -0.43
NPHP4-208ENST00000478423 UBE2G2P60604 165 aa12.36□□□□□ -0.43
NPHP4-208ENST00000478423 MRPS11P82912 194 aaKnown RBP12.36□□□□□ -0.43
NPHP4-208ENST00000478423 SPINK9Q5DT21 86 aa12.36□□□□□ -0.43
NPHP4-208ENST00000478423 HIST2H3AQ71DI3 136 aa12.36□□□□□ -0.43
NPHP4-208ENST00000478423 FAM219AQ8IW50 185 aa12.36□□□□□ -0.43
NPHP4-208ENST00000478423 FAM206AQ9NX38 181 aa12.36□□□□□ -0.43
NPHP4-208ENST00000478423 NPIPB13A6NJU9 1138 aa12.36□□□□□ -0.43
NPHP4-208ENST00000478423 NPIPB4C9JG80 1138 aa12.36□□□□□ -0.43
NPHP4-208ENST00000478423 OPN1MWP04001 364 aa12.36□□□□□ -0.43
NPHP4-208ENST00000478423 OPN1MW2P0DN77 364 aa12.36□□□□□ -0.43
NPHP4-208ENST00000478423 OPN1MW3P0DN78 364 aa12.36□□□□□ -0.43
NPHP4-208ENST00000478423 P2RY6Q15077 328 aa12.36□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms