RNA–Protein interactions for RNA: ENST00000477676.6

CKS1B-207, Transcript of CDC28 protein kinase regulatory subunit 1B, humanhuman

TSL 3

Gene CKS1B, Length 602 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1B-207ENST00000477676 ACTG2P63267 376 aa3.59□□□□□ -1.83
CKS1B-207ENST00000477676 ACTC1P68032 377 aa3.59□□□□□ -1.83
CKS1B-207ENST00000477676 ACTA1P68133 377 aa3.59□□□□□ -1.83
CKS1B-207ENST00000477676 SLC34A1Q06495 639 aa3.59□□□□□ -1.83
CKS1B-207ENST00000477676 MFGE8Q08431 387 aaPredicted RBP3.59□□□□□ -1.83
CKS1B-207ENST00000477676 KPNB1Q14974 876 aaKnown RBP3.59□□□□□ -1.83
CKS1B-207ENST00000477676 TMEM42Q69YG0 159 aa3.59□□□□□ -1.83
CKS1B-207ENST00000477676 MOB3CQ70IA8 216 aa3.59□□□□□ -1.83
CKS1B-207ENST00000477676 CENPVQ7Z7K6 275 aaPredicted RBP3.59□□□□□ -1.83
CKS1B-207ENST00000477676 ANGPTL5Q86XS5 388 aa3.59□□□□□ -1.83
CKS1B-207ENST00000477676 ZNF561Q8N587 486 aa3.59□□□□□ -1.83
CKS1B-207ENST00000477676 TPRX1Q8N7U7 411 aa3.59□□□□□ -1.83
CKS1B-207ENST00000477676 OR52N4Q8NGI2 321 aa3.59□□□□□ -1.83
CKS1B-207ENST00000477676 OR5A2Q8NGI9 324 aa3.59□□□□□ -1.83
CKS1B-207ENST00000477676 OTOSQ8NHW6 89 aa3.59□□□□□ -1.83
CKS1B-207ENST00000477676 OR51E1Q8TCB6 317 aa3.59□□□□□ -1.83
CKS1B-207ENST00000477676 RBMXL1Q96E39 390 aaKnown RBP3.59□□□□□ -1.83
CKS1B-207ENST00000477676 NOL4LQ96MY1 436 aaPredicted RBP3.59□□□□□ -1.83
CKS1B-207ENST00000477676 DUX3Q96PT4 197 aa3.59□□□□□ -1.83
CKS1B-207ENST00000477676 INTS14Q96SY0 518 aa3.59□□□□□ -1.83
CKS1B-207ENST00000477676 P2RX4Q99571 388 aa3.59□□□□□ -1.83
CKS1B-207ENST00000477676 TEAD3Q99594 435 aa3.59□□□□□ -1.83
CKS1B-207ENST00000477676 NIPSNAP1Q9BPW8 284 aa3.59□□□□□ -1.83
CKS1B-207ENST00000477676 RBM38Q9H0Z9 239 aaKnown RBP3.59□□□□□ -1.83
CKS1B-207ENST00000477676 RGCCQ9H4X1 137 aa3.59□□□□□ -1.83
CKS1B-207ENST00000477676 NIPAL2Q9H841 368 aa3.59□□□□□ -1.83
CKS1B-207ENST00000477676 EFCAB1Q9HAE3 211 aa3.59□□□□□ -1.83
CKS1B-207ENST00000477676 PLEKHA2Q9HB19 425 aa3.59□□□□□ -1.83
CKS1B-207ENST00000477676 GPR84Q9NQS5 396 aa3.59□□□□□ -1.83
CKS1B-207ENST00000477676 PAPOLBQ9NRJ5 636 aaKnown RBP3.59□□□□□ -1.83
CKS1B-207ENST00000477676 ABCB10Q9NRK6 738 aa3.59□□□□□ -1.83
CKS1B-207ENST00000477676 CMC2Q9NRP2 79 aa3.59□□□□□ -1.83
CKS1B-207ENST00000477676 GPR173Q9NS66 373 aa3.59□□□□□ -1.83
CKS1B-207ENST00000477676 FAM206AQ9NX38 181 aa3.59□□□□□ -1.83
CKS1B-207ENST00000477676 OR14J1Q9UGF5 321 aa3.59□□□□□ -1.83
CKS1B-207ENST00000477676 PITPNC1Q9UKF7 332 aa3.59□□□□□ -1.83
CKS1B-207ENST00000477676 SAMD4AQ9UPU9 718 aaKnown RBP3.59□□□□□ -1.83
CKS1B-207ENST00000477676 PCDHGB5Q9Y5G0 923 aa3.59□□□□□ -1.83
CKS1B-207ENST00000477676 KIAA1109Q2LD37 5005 aa3.58□□□□□ -1.84
CKS1B-207ENST00000477676 FAM172BPA6NC97 362 aa3.58□□□□□ -1.84
CKS1B-207ENST00000477676 OR5B21A6NL26 309 aa3.58□□□□□ -1.84
CKS1B-207ENST00000477676 E9PQ18 207 aa3.58□□□□□ -1.84
CKS1B-207ENST00000477676 C3orf84H3BNL1 204 aa3.58□□□□□ -1.84
CKS1B-207ENST00000477676 LY6LH3BQJ8 138 aa3.58□□□□□ -1.84
CKS1B-207ENST00000477676 J3QT63 122 aa3.58□□□□□ -1.84
CKS1B-207ENST00000477676 TNFRSF11BO00300 401 aa3.58□□□□□ -1.84
CKS1B-207ENST00000477676 ARPC2O15144 300 aa3.58□□□□□ -1.84
CKS1B-207ENST00000477676 NXPH2O95156 264 aa3.58□□□□□ -1.84
CKS1B-207ENST00000477676 DUS4LO95620 317 aaKnown RBP3.58□□□□□ -1.84
CKS1B-207ENST00000477676 IGLV1-47P01700 117 aa3.58□□□□□ -1.84
CKS1B-207ENST00000477676 RBP4P02753 201 aa3.58□□□□□ -1.84
CKS1B-207ENST00000477676 TTRP02766 147 aa3.58□□□□□ -1.84
CKS1B-207ENST00000477676 FABP3P05413 133 aa3.58□□□□□ -1.84
CKS1B-207ENST00000477676 LYNP07948 512 aa3.58□□□□□ -1.84
CKS1B-207ENST00000477676 HSD17B1P14061 328 aa3.58□□□□□ -1.84
CKS1B-207ENST00000477676 ALOX5APP20292 161 aa3.58□□□□□ -1.84
CKS1B-207ENST00000477676 ATP6V1B2P21281 511 aa3.58□□□□□ -1.84
CKS1B-207ENST00000477676 MAGEA2P43356 314 aa3.58□□□□□ -1.84
CKS1B-207ENST00000477676 HAAOP46952 286 aa3.58□□□□□ -1.84
CKS1B-207ENST00000477676 LUMP51884 338 aaPredicted RBP3.58□□□□□ -1.84
CKS1B-207ENST00000477676 SMIM11AP58511 58 aa3.58□□□□□ -1.84
CKS1B-207ENST00000477676 RPL23AP62750 156 aaKnown RBP3.58□□□□□ -1.84
CKS1B-207ENST00000477676 DYNC1I2Q13409 638 aaKnown RBP3.58□□□□□ -1.84
CKS1B-207ENST00000477676 SMIM21Q3B7S5 101 aa3.58□□□□□ -1.84
CKS1B-207ENST00000477676 MINOS1Q5TGZ0 78 aa3.58□□□□□ -1.84
CKS1B-207ENST00000477676 PLCXD3Q63HM9 321 aa3.58□□□□□ -1.84
CKS1B-207ENST00000477676 FAM90A2PQ658T7 463 aa3.58□□□□□ -1.84
CKS1B-207ENST00000477676 RPL13AP3Q6NVV1 102 aa3.58□□□□□ -1.84
CKS1B-207ENST00000477676 PLBD1Q6P4A8 553 aa3.58□□□□□ -1.84
CKS1B-207ENST00000477676 Q6ZSR3 168 aa3.58□□□□□ -1.84
CKS1B-207ENST00000477676 SHFQ7M4L6 423 aa3.58□□□□□ -1.84
CKS1B-207ENST00000477676 OR2W3Q7Z3T1 314 aa3.58□□□□□ -1.84
CKS1B-207ENST00000477676 TMEM179BQ7Z7N9 219 aa3.58□□□□□ -1.84
CKS1B-207ENST00000477676 AQP11Q8NBQ7 271 aa3.58□□□□□ -1.84
CKS1B-207ENST00000477676 OR52L1Q8NGH7 329 aa3.58□□□□□ -1.84
CKS1B-207ENST00000477676 OR13D1Q8NGV5 346 aa3.58□□□□□ -1.84
CKS1B-207ENST00000477676 ZNF671Q8TAW3 534 aa3.58□□□□□ -1.84
CKS1B-207ENST00000477676 THEM6Q8WUY1 208 aa3.58□□□□□ -1.84
CKS1B-207ENST00000477676 RBM14Q96PK6 669 aaKnown RBP3.58□□□□□ -1.84
CKS1B-207ENST00000477676 SLC25A33Q9BSK2 321 aa3.58□□□□□ -1.84
CKS1B-207ENST00000477676 CHID1Q9BWS9 393 aa3.58□□□□□ -1.84
CKS1B-207ENST00000477676 DGCR6LQ9BY27 220 aa3.58□□□□□ -1.84
CKS1B-207ENST00000477676 TTTY10Q9BZA0 68 aa3.58□□□□□ -1.84
CKS1B-207ENST00000477676 CHST6Q9GZX3 395 aa3.58□□□□□ -1.84
CKS1B-207ENST00000477676 PBOV1Q9GZY1 135 aa3.58□□□□□ -1.84
CKS1B-207ENST00000477676 C1orf21Q9H246 121 aa3.58□□□□□ -1.84
CKS1B-207ENST00000477676 OR51V1Q9H2C8 321 aa3.58□□□□□ -1.84
CKS1B-207ENST00000477676 ABCB9Q9NP78 766 aa3.58□□□□□ -1.84
CKS1B-207ENST00000477676 KRCC1Q9NPI7 259 aaPredicted RBP3.58□□□□□ -1.84
CKS1B-207ENST00000477676 RASL12Q9NYN1 266 aa3.58□□□□□ -1.84
CKS1B-207ENST00000477676 MTCH1Q9NZJ7 389 aa3.58□□□□□ -1.84
CKS1B-207ENST00000477676 LINC00527Q9UJ94 153 aa3.58□□□□□ -1.84
CKS1B-207ENST00000477676 COPS3Q9UNS2 423 aa3.58□□□□□ -1.84
CKS1B-207ENST00000477676 PIGLQ9Y2B2 252 aa3.58□□□□□ -1.84
CKS1B-207ENST00000477676 RRP15Q9Y3B9 282 aaKnown RBP3.58□□□□□ -1.84
CKS1B-207ENST00000477676 MINOS1-NBL1R4GNA1 71 aa3.58□□□□□ -1.84
CKS1B-207ENST00000477676 DNAH11Q96DT5 4516 aa3.58□□□□□ -1.84
CKS1B-207ENST00000477676 LCE6AA0A183 80 aa3.57□□□□□ -1.84
CKS1B-207ENST00000477676 CCDC182A6NF36 153 aa3.57□□□□□ -1.84
CKS1B-207ENST00000477676 FAM90A12PA8MX19 464 aa3.57□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 59.2 ms