RNA–Protein interactions for RNA: ENST00000473212.1

COL18A1-207, Transcript of collagen type XVIII alpha 1 chain, humanhuman

TSL 2

Gene COL18A1, Length 2,515 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL18A1-207ENST00000473212 NXPH3O95157 252 aa18.16■□□□□ 0.5
COL18A1-207ENST00000473212 CXorf66Q5JRM2 361 aaPredicted RBP18.16■□□□□ 0.5
COL18A1-207ENST00000473212 SLC25A26Q70HW3 274 aa18.16■□□□□ 0.5
COL18A1-207ENST00000473212 DPPA2Q7Z7J5 298 aa18.16■□□□□ 0.5
COL18A1-207ENST00000473212 OR10D3Q8NH80 312 aa18.16■□□□□ 0.5
COL18A1-207ENST00000473212 YPEL4Q96NS1 127 aa18.16■□□□□ 0.5
COL18A1-207ENST00000473212 OR2H1Q9GZK4 316 aa18.16■□□□□ 0.5
COL18A1-207ENST00000473212 OR51M1Q9H341 326 aa18.16■□□□□ 0.5
COL18A1-207ENST00000473212 PILRBQ9UKJ0 227 aa18.16■□□□□ 0.5
COL18A1-207ENST00000473212 ZNF727A8MUV8 499 aa18.16■□□□□ 0.5
COL18A1-207ENST00000473212 PITX3O75364 302 aa18.16■□□□□ 0.5
COL18A1-207ENST00000473212 IFNA17P01571 189 aa18.16■□□□□ 0.5
COL18A1-207ENST00000473212 IL11RAQ14626 422 aa18.16■□□□□ 0.5
COL18A1-207ENST00000473212 OR8B8Q15620 311 aa18.16■□□□□ 0.5
COL18A1-207ENST00000473212 HAGHQ16775 308 aa18.16■□□□□ 0.5
COL18A1-207ENST00000473212 HEPN1Q6WQI6 88 aa18.16■□□□□ 0.5
COL18A1-207ENST00000473212 ZNF611Q8N823 705 aa18.16■□□□□ 0.5
COL18A1-207ENST00000473212 CPEB3Q8NE35 698 aaKnown RBP18.16■□□□□ 0.5
COL18A1-207ENST00000473212 OR2Y1Q8NGV0 311 aa18.16■□□□□ 0.5
COL18A1-207ENST00000473212 SF3B5Q9BWJ5 86 aaKnown RBP18.16■□□□□ 0.5
COL18A1-207ENST00000473212 PAPOLGQ9BWT3 736 aaKnown RBP18.16■□□□□ 0.5
COL18A1-207ENST00000473212 PROB1E7EW31 1015 aa18.15■□□□□ 0.5
COL18A1-207ENST00000473212 ADAM20O43506 726 aa18.15■□□□□ 0.5
COL18A1-207ENST00000473212 OTX2P32243 289 aa18.15■□□□□ 0.5
COL18A1-207ENST00000473212 RND3P61587 244 aa18.15■□□□□ 0.5
COL18A1-207ENST00000473212 KRTAP27-1Q3LI81 207 aa18.15■□□□□ 0.5
COL18A1-207ENST00000473212 FAM209BQ5JX69 171 aa18.15■□□□□ 0.5
COL18A1-207ENST00000473212 TMEM252Q8N6L7 170 aa18.15■□□□□ 0.5
COL18A1-207ENST00000473212 OR5C1Q8NGR4 320 aa18.15■□□□□ 0.5
COL18A1-207ENST00000473212 PLEKHF2Q9H8W4 249 aa18.15■□□□□ 0.5
COL18A1-207ENST00000473212 GLRX2Q9NS18 164 aa18.15■□□□□ 0.5
COL18A1-207ENST00000473212 C9J4A7 227 aa18.15■□□□□ 0.5
COL18A1-207ENST00000473212 CST7O76096 145 aa18.15■□□□□ 0.5
COL18A1-207ENST00000473212 CCNOP22674 350 aa18.15■□□□□ 0.5
COL18A1-207ENST00000473212 MAS1LP35410 378 aa18.15■□□□□ 0.5
COL18A1-207ENST00000473212 RPS10P46783 165 aaKnown RBP18.15■□□□□ 0.5
COL18A1-207ENST00000473212 SRPXP78539 464 aa18.15■□□□□ 0.5
COL18A1-207ENST00000473212 HIKESHIQ53FT3 197 aa18.15■□□□□ 0.5
COL18A1-207ENST00000473212 ACER2Q5QJU3 275 aa18.15■□□□□ 0.5
COL18A1-207ENST00000473212 SELENOHQ8IZQ5 122 aaKnown RBP18.15■□□□□ 0.5
COL18A1-207ENST00000473212 M1APQ8TC57 530 aa18.15■□□□□ 0.5
COL18A1-207ENST00000473212 CPT1CQ8TCG5 803 aa18.15■□□□□ 0.5
COL18A1-207ENST00000473212 FGF23Q9GZV9 251 aaPredicted RBP18.15■□□□□ 0.5
COL18A1-207ENST00000473212 MMP24Q9Y5R2 645 aa18.15■□□□□ 0.5
COL18A1-207ENST00000473212 LRRC3CA6NJW4 275 aa18.14■□□□□ 0.49
COL18A1-207ENST00000473212 H3BQ15 152 aa18.14■□□□□ 0.49
COL18A1-207ENST00000473212 PPIHO43447 177 aaKnown RBP18.14■□□□□ 0.49
COL18A1-207ENST00000473212 ZNF100Q8IYN0 542 aa18.14■□□□□ 0.49
COL18A1-207ENST00000473212 TMEM217Q8N7C4 229 aa18.14■□□□□ 0.49
COL18A1-207ENST00000473212 NAT6Q93015 286 aa18.14■□□□□ 0.49
COL18A1-207ENST00000473212 LYRM2Q9NU23 88 aaPredicted RBP18.14■□□□□ 0.49
COL18A1-207ENST00000473212 ZMAT5Q9UDW3 170 aaKnown RBP18.14■□□□□ 0.49
COL18A1-207ENST00000473212 LIPGQ9Y5X9 500 aa18.14■□□□□ 0.49
COL18A1-207ENST00000473212 ZNF816-ZNF321PA0A0X1KG74 233 aa18.14■□□□□ 0.49
COL18A1-207ENST00000473212 PDGFBP01127 241 aaPredicted RBP18.14■□□□□ 0.49
COL18A1-207ENST00000473212 FBP1P09467 338 aa18.14■□□□□ 0.49
COL18A1-207ENST00000473212 DYNLT3P51808 116 aa18.14■□□□□ 0.49
COL18A1-207ENST00000473212 FOXG1P55316 489 aaPredicted RBP18.14■□□□□ 0.49
COL18A1-207ENST00000473212 VAMP2P63027 116 aa18.14■□□□□ 0.49
COL18A1-207ENST00000473212 ZNF818PQ6ZRF7 136 aa18.14■□□□□ 0.49
COL18A1-207ENST00000473212 EXTL1Q92935 676 aa18.14■□□□□ 0.49
COL18A1-207ENST00000473212 RAB39BQ96DA2 213 aa18.14■□□□□ 0.49
COL18A1-207ENST00000473212 MUCL1Q96DR8 90 aa18.14■□□□□ 0.49
COL18A1-207ENST00000473212 TMEM56Q96MV1 263 aa18.14■□□□□ 0.49
COL18A1-207ENST00000473212 SMDT1Q9H4I9 107 aa18.14■□□□□ 0.49
COL18A1-207ENST00000473212 PLSCR2Q9NRY7 297 aa18.14■□□□□ 0.49
COL18A1-207ENST00000473212 TMEM56-RWDD3S4R434 201 aa18.14■□□□□ 0.49
COL18A1-207ENST00000473212 PCSK5Q92824 1860 aa18.14■□□□□ 0.49
COL18A1-207ENST00000473212 ASPMQ8IZT6 3477 aa18.14■□□□□ 0.49
COL18A1-207ENST00000473212 A0A096LPE4 126 aa18.13■□□□□ 0.49
COL18A1-207ENST00000473212 A0A1W2PPZ6 126 aa18.13■□□□□ 0.49
COL18A1-207ENST00000473212 GJE1A6NN92 205 aa18.13■□□□□ 0.49
COL18A1-207ENST00000473212 PMS2CLQ68D20 193 aa18.13■□□□□ 0.49
COL18A1-207ENST00000473212 C1QL4Q86Z23 238 aa18.13■□□□□ 0.49
COL18A1-207ENST00000473212 FAM185AQ8N0U4 392 aa18.13■□□□□ 0.49
COL18A1-207ENST00000473212 H0YL77 283 aa18.13■□□□□ 0.49
COL18A1-207ENST00000473212 S100PP25815 95 aa18.13■□□□□ 0.49
COL18A1-207ENST00000473212 RUNX1Q01196 453 aa18.13■□□□□ 0.49
COL18A1-207ENST00000473212 ODF3L1Q8IXM7 274 aa18.13■□□□□ 0.49
COL18A1-207ENST00000473212 GAPTQ8N292 157 aa18.13■□□□□ 0.49
COL18A1-207ENST00000473212 SLC25A31Q9H0C2 315 aa18.13■□□□□ 0.49
COL18A1-207ENST00000473212 ZNF391Q9UJN7 358 aa18.13■□□□□ 0.49
COL18A1-207ENST00000473212 HSPA12AO43301 675 aa18.12■□□□□ 0.49
COL18A1-207ENST00000473212 YIF1AO95070 293 aa18.12■□□□□ 0.49
COL18A1-207ENST00000473212 TMEM50AO95807 157 aa18.12■□□□□ 0.49
COL18A1-207ENST00000473212 SRP19P09132 144 aaKnown RBP18.12■□□□□ 0.49
COL18A1-207ENST00000473212 SCTP09683 121 aa18.12■□□□□ 0.49
COL18A1-207ENST00000473212 EPHA1P21709 976 aa18.12■□□□□ 0.49
COL18A1-207ENST00000473212 KIAA0141Q14154 515 aaPredicted RBP18.12■□□□□ 0.49
COL18A1-207ENST00000473212 SNIP1Q8TAD8 396 aaKnown RBP18.12■□□□□ 0.49
COL18A1-207ENST00000473212 EDARADDQ8WWZ3 215 aa18.12■□□□□ 0.49
COL18A1-207ENST00000473212 SPIN2AQ99865 258 aa18.12■□□□□ 0.49
COL18A1-207ENST00000473212 SPIN2BQ9BPZ2 258 aa18.12■□□□□ 0.49
COL18A1-207ENST00000473212 TMPRSS5Q9H3S3 457 aa18.12■□□□□ 0.49
COL18A1-207ENST00000473212 SMOC1Q9H4F8 434 aa18.12■□□□□ 0.49
COL18A1-207ENST00000473212 GPR35Q9HC97 309 aa18.12■□□□□ 0.49
COL18A1-207ENST00000473212 PARPBPQ9NWS1 579 aa18.12■□□□□ 0.49
COL18A1-207ENST00000473212 RPL36A-HNRNPH2H7BZ11 118 aa18.12■□□□□ 0.49
COL18A1-207ENST00000473212 HSD17B6O14756 317 aa18.12■□□□□ 0.49
COL18A1-207ENST00000473212 TAGLN2P37802 199 aaKnown RBP18.12■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms