RNA–Protein interactions for RNA: ENST00000470837.1

CCM2-204, Transcript of CCM2 scaffold protein, humanhuman

TSL 5

Gene CCM2, Length 549 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-204ENST00000470837 DISC1C4P0D8 188 aa8.17□□□□□ -1.1
CCM2-204ENST00000470837 LYNX1G3V0Z9 82 aa8.17□□□□□ -1.1
CCM2-204ENST00000470837 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP8.17□□□□□ -1.1
CCM2-204ENST00000470837 OVOL3O00110 214 aa8.17□□□□□ -1.1
CCM2-204ENST00000470837 SIGLEC5O15389 551 aa8.17□□□□□ -1.1
CCM2-204ENST00000470837 LYRM1O43325 122 aa8.17□□□□□ -1.1
CCM2-204ENST00000470837 ADAM20O43506 726 aa8.17□□□□□ -1.1
CCM2-204ENST00000470837 SSX5O60225 188 aa8.17□□□□□ -1.1
CCM2-204ENST00000470837 FSTL3O95633 263 aa8.17□□□□□ -1.1
CCM2-204ENST00000470837 PTTG1O95997 202 aa8.17□□□□□ -1.1
CCM2-204ENST00000470837 CSN2P05814 226 aa8.17□□□□□ -1.1
CCM2-204ENST00000470837 FCGR3AP08637 254 aa8.17□□□□□ -1.1
CCM2-204ENST00000470837 LYNX1P0DP58 116 aa8.17□□□□□ -1.1
CCM2-204ENST00000470837 NDUFB7P17568 137 aa8.17□□□□□ -1.1
CCM2-204ENST00000470837 GPR6P46095 362 aaPredicted RBP8.17□□□□□ -1.1
CCM2-204ENST00000470837 PDLIM4P50479 330 aa8.17□□□□□ -1.1
CCM2-204ENST00000470837 ATP5J2P56134 94 aa8.17□□□□□ -1.1
CCM2-204ENST00000470837 EDDM3BP56851 147 aa8.17□□□□□ -1.1
CCM2-204ENST00000470837 TSPAN5P62079 268 aa8.17□□□□□ -1.1
CCM2-204ENST00000470837 HOXA4Q00056 320 aaPredicted RBP8.17□□□□□ -1.1
CCM2-204ENST00000470837 EDDM3AQ14507 147 aa8.17□□□□□ -1.1
CCM2-204ENST00000470837 C6orf183Q5T699 404 aa8.17□□□□□ -1.1
CCM2-204ENST00000470837 ATPAF1Q5TC12 328 aaPredicted RBP8.17□□□□□ -1.1
CCM2-204ENST00000470837 STEAP1BQ6NZ63 245 aa8.17□□□□□ -1.1
CCM2-204ENST00000470837 ZNF782Q6ZMW2 699 aaPredicted RBP8.17□□□□□ -1.1
CCM2-204ENST00000470837 DNM1P46Q6ZS02 220 aa8.17□□□□□ -1.1
CCM2-204ENST00000470837 HOGA1Q86XE5 327 aa8.17□□□□□ -1.1
CCM2-204ENST00000470837 TGIF2LYQ8IUE0 185 aa8.17□□□□□ -1.1
CCM2-204ENST00000470837 CD177Q8N6Q3 437 aa8.17□□□□□ -1.1
CCM2-204ENST00000470837 GVQW1Q8N7I0 195 aa8.17□□□□□ -1.1
CCM2-204ENST00000470837 ZNF565Q8N9K5 539 aa8.17□□□□□ -1.1
CCM2-204ENST00000470837 MINDY2Q8NBR6 621 aa8.17□□□□□ -1.1
CCM2-204ENST00000470837 DYRK2Q92630 601 aa8.17□□□□□ -1.1
CCM2-204ENST00000470837 SDSLQ96GA7 329 aa8.17□□□□□ -1.1
CCM2-204ENST00000470837 DCAF16Q9NXF7 216 aa8.17□□□□□ -1.1
CCM2-204ENST00000470837 ZNF581Q9P0T4 197 aa8.17□□□□□ -1.1
CCM2-204ENST00000470837 K7N7A8 449 aa8.16□□□□□ -1.1
CCM2-204ENST00000470837 LANCL1O43813 399 aa8.16□□□□□ -1.1
CCM2-204ENST00000470837 SSX4O60224 188 aa8.16□□□□□ -1.1
CCM2-204ENST00000470837 PSPNO60542 156 aa8.16□□□□□ -1.1
CCM2-204ENST00000470837 RP2O75695 350 aa8.16□□□□□ -1.1
CCM2-204ENST00000470837 LY6HO94772 140 aa8.16□□□□□ -1.1
CCM2-204ENST00000470837 TK1P04183 234 aa8.16□□□□□ -1.1
CCM2-204ENST00000470837 CD3DP04234 171 aa8.16□□□□□ -1.1
CCM2-204ENST00000470837 CTXN2P0C2S0 81 aa8.16□□□□□ -1.1
CCM2-204ENST00000470837 RPS2P15880 293 aaKnown RBP8.16□□□□□ -1.1
CCM2-204ENST00000470837 DNASE1P24855 282 aa8.16□□□□□ -1.1
CCM2-204ENST00000470837 GLP1RP43220 463 aa8.16□□□□□ -1.1
CCM2-204ENST00000470837 OR3A1P47881 315 aa8.16□□□□□ -1.1
CCM2-204ENST00000470837 AESQ08117 197 aa8.16□□□□□ -1.1
CCM2-204ENST00000470837 KLF9Q13886 244 aaPredicted RBP8.16□□□□□ -1.1
CCM2-204ENST00000470837 ZMYND11Q15326 602 aa8.16□□□□□ -1.1
CCM2-204ENST00000470837 SRSF7Q16629 238 aaKnown RBP eCLIP8.16□□□□□ -1.1
CCM2-204ENST00000470837 AVPI1Q5T686 147 aa8.16□□□□□ -1.1
CCM2-204ENST00000470837 SLC35E4Q6ICL7 350 aa8.16□□□□□ -1.1
CCM2-204ENST00000470837 TRAT1Q6PIZ9 186 aa8.16□□□□□ -1.1
CCM2-204ENST00000470837 CLEC2AQ6UVW9 174 aa8.16□□□□□ -1.1
CCM2-204ENST00000470837 ZNF497Q6ZNH5 498 aa8.16□□□□□ -1.1
CCM2-204ENST00000470837 ZNF788Q6ZQV5 615 aa8.16□□□□□ -1.1
CCM2-204ENST00000470837 RTN4RL2Q86UN3 420 aa8.16□□□□□ -1.1
CCM2-204ENST00000470837 ZNF295-AS1Q8N0V1 137 aa8.16□□□□□ -1.1
CCM2-204ENST00000470837 ZNRF1Q8ND25 227 aa8.16□□□□□ -1.1
CCM2-204ENST00000470837 OR4S1Q8NGB4 309 aa8.16□□□□□ -1.1
CCM2-204ENST00000470837 OR8B3Q8NGG8 313 aa8.16□□□□□ -1.1
CCM2-204ENST00000470837 CCDC107Q8WV48 283 aa8.16□□□□□ -1.1
CCM2-204ENST00000470837 GAFA1Q96PS6 74 aa8.16□□□□□ -1.1
CCM2-204ENST00000470837 OR8B2Q96RD0 313 aa8.16□□□□□ -1.1
CCM2-204ENST00000470837 TMEM246Q9BRR3 403 aa8.16□□□□□ -1.1
CCM2-204ENST00000470837 HDHD3Q9BSH5 251 aaPredicted RBP8.16□□□□□ -1.1
CCM2-204ENST00000470837 DPAGT1Q9H3H5 408 aa8.16□□□□□ -1.1
CCM2-204ENST00000470837 NECAP2Q9NVZ3 263 aa8.16□□□□□ -1.1
CCM2-204ENST00000470837 OR6C3Q9NZP0 311 aa8.16□□□□□ -1.1
CCM2-204ENST00000470837 COPZ2Q9P299 210 aa8.16□□□□□ -1.1
CCM2-204ENST00000470837 SLC25A10Q9UBX3 287 aaPredicted RBP8.16□□□□□ -1.1
CCM2-204ENST00000470837 MIOXQ9UGB7 285 aa8.16□□□□□ -1.1
CCM2-204ENST00000470837 ZNF230Q9UIE0 474 aaPredicted RBP8.16□□□□□ -1.1
CCM2-204ENST00000470837 ANXA10Q9UJ72 324 aa8.16□□□□□ -1.1
CCM2-204ENST00000470837 SCP2D1Q9UJQ7 156 aa8.16□□□□□ -1.1
CCM2-204ENST00000470837 ZNF222Q9UK12 451 aa8.16□□□□□ -1.1
CCM2-204ENST00000470837 ABCA4P78363 2273 aa8.15□□□□□ -1.1
CCM2-204ENST00000470837 TRGV10A0A0A0MS01 117 aa8.15□□□□□ -1.1
CCM2-204ENST00000470837 TRBV6-6A0A0A6YYG2 114 aa8.15□□□□□ -1.1
CCM2-204ENST00000470837 TMEM82A0PJX8 343 aa8.15□□□□□ -1.1
CCM2-204ENST00000470837 TRDCB7Z8K6 153 aa8.15□□□□□ -1.1
CCM2-204ENST00000470837 SPINT2O43291 252 aa8.15□□□□□ -1.1
CCM2-204ENST00000470837 ZNF737O75373 536 aa8.15□□□□□ -1.1
CCM2-204ENST00000470837 NAPSAO96009 420 aa8.15□□□□□ -1.1
CCM2-204ENST00000470837 IGHV2-70P01814 119 aa8.15□□□□□ -1.1
CCM2-204ENST00000470837 PMP2P02689 132 aa8.15□□□□□ -1.1
CCM2-204ENST00000470837 MT-ND4P03905 459 aa8.15□□□□□ -1.1
CCM2-204ENST00000470837 AMY2AP04746 511 aa8.15□□□□□ -1.1
CCM2-204ENST00000470837 HEXAP06865 529 aa8.15□□□□□ -1.1
CCM2-204ENST00000470837 HRH1P35367 487 aa8.15□□□□□ -1.1
CCM2-204ENST00000470837 P2RX3P56373 397 aa8.15□□□□□ -1.1
CCM2-204ENST00000470837 DSCR9P59020 149 aa8.15□□□□□ -1.1
CCM2-204ENST00000470837 IFITM3Q01628 133 aa8.15□□□□□ -1.1
CCM2-204ENST00000470837 CDK10Q15131 360 aa8.15□□□□□ -1.1
CCM2-204ENST00000470837 SCGB2B2Q4G0G5 96 aa8.15□□□□□ -1.1
CCM2-204ENST00000470837 TMEM155Q4W5P6 130 aa8.15□□□□□ -1.1
CCM2-204ENST00000470837 OR52W1Q6IF63 320 aa8.15□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 45 ms