RNA–Protein interactions for RNA: ENST00000467435.1

HDLBP-231, Transcript of high density lipoprotein binding protein, human

TSL 2

Gene HDLBP, Length 639 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
HDLBP-231	ENST00000467435	TMEM165	Q9HC07	324 aa		10.36	□□□□□ -0.75
HDLBP-231	ENST00000467435	TREM2	Q9NZC2	230 aa		10.36	□□□□□ -0.75
HDLBP-231	ENST00000467435	IL19	Q9UHD0	177 aa		10.36	□□□□□ -0.75
HDLBP-231	ENST00000467435	GPR132	Q9UNW8	380 aa		10.36	□□□□□ -0.75
HDLBP-231	ENST00000467435	RNF115	Q9Y4L5	304 aa		10.36	□□□□□ -0.75
HDLBP-231	ENST00000467435	TUBAL3	A6NHL2	446 aa		10.35	□□□□□ -0.75
HDLBP-231	ENST00000467435	TRDC	B7Z8K6	153 aa		10.35	□□□□□ -0.75
HDLBP-231	ENST00000467435		E7EQL1	145 aa		10.35	□□□□□ -0.75
HDLBP-231	ENST00000467435	SMLR1	H3BR10	107 aa		10.35	□□□□□ -0.75
HDLBP-231	ENST00000467435		M0R233	179 aa		10.35	□□□□□ -0.75
HDLBP-231	ENST00000467435	C1QB	P02746	253 aa		10.35	□□□□□ -0.75
HDLBP-231	ENST00000467435	LMO1	P25800	156 aa		10.35	□□□□□ -0.75
HDLBP-231	ENST00000467435	CD34	P28906	385 aa		10.35	□□□□□ -0.75
HDLBP-231	ENST00000467435	FCGR2C	P31995	323 aa		10.35	□□□□□ -0.75
HDLBP-231	ENST00000467435	CFHR2	P36980	270 aa		10.35	□□□□□ -0.75
HDLBP-231	ENST00000467435	TLE1	Q04724	770 aa		10.35	□□□□□ -0.75
HDLBP-231	ENST00000467435	BEX5	Q5H9J7	111 aa		10.35	□□□□□ -0.75
HDLBP-231	ENST00000467435	ZNF880	Q6PDB4	577 aa		10.35	□□□□□ -0.75
HDLBP-231	ENST00000467435	ZNF497	Q6ZNH5	498 aa		10.35	□□□□□ -0.75
HDLBP-231	ENST00000467435	C20orf204	Q6ZNR8	217 aa		10.35	□□□□□ -0.75
HDLBP-231	ENST00000467435	FAM90A1	Q86YD7	464 aa		10.35	□□□□□ -0.75
HDLBP-231	ENST00000467435	C12orf45	Q8N5I9	185 aa	Predicted RBP	10.35	□□□□□ -0.75
HDLBP-231	ENST00000467435	GCSAM	Q8N6F7	178 aa		10.35	□□□□□ -0.75
HDLBP-231	ENST00000467435	BOLL	Q8N9W6	283 aa	Known RBP	10.35	□□□□□ -0.75
HDLBP-231	ENST00000467435	GALNT11	Q8NCW6	608 aa		10.35	□□□□□ -0.75
HDLBP-231	ENST00000467435	NEUROG1	Q92886	237 aa		10.35	□□□□□ -0.75
HDLBP-231	ENST00000467435	TMEM230	Q96A57	120 aa		10.35	□□□□□ -0.75
HDLBP-231	ENST00000467435	DIRC2	Q96SL1	478 aa		10.35	□□□□□ -0.75
HDLBP-231	ENST00000467435	ZNF436	Q9C0F3	470 aa	Predicted RBP	10.35	□□□□□ -0.75
HDLBP-231	ENST00000467435	LIME1	Q9H400	295 aa		10.35	□□□□□ -0.75
HDLBP-231	ENST00000467435	DNAJB11	Q9UBS4	358 aa		10.35	□□□□□ -0.75
HDLBP-231	ENST00000467435	C14orf166	Q9Y224	244 aa	Known RBP	10.35	□□□□□ -0.75
HDLBP-231	ENST00000467435	NPTN	Q9Y639	398 aa		10.35	□□□□□ -0.75
HDLBP-231	ENST00000467435	TMEM30CP	A0ZSE6	113 aa		10.34	□□□□□ -0.75
HDLBP-231	ENST00000467435	C9orf170	A2RU37	121 aa		10.34	□□□□□ -0.75
HDLBP-231	ENST00000467435	RFPL4A	A6NLU0	287 aa		10.34	□□□□□ -0.75
HDLBP-231	ENST00000467435	POM121C	A8CG34	1229 aa		10.34	□□□□□ -0.75
HDLBP-231	ENST00000467435	C17orf100	A8MU93	164 aa		10.34	□□□□□ -0.75
HDLBP-231	ENST00000467435	RFPL4AL1	F8VTS6	287 aa		10.34	□□□□□ -0.75
HDLBP-231	ENST00000467435	ANKHD1-EIF4EBP3	H7C0V5	636 aa	Predicted RBP	10.34	□□□□□ -0.75
HDLBP-231	ENST00000467435	IFNL4	K9M1U5	179 aa		10.34	□□□□□ -0.75
HDLBP-231	ENST00000467435	GOSR2	O14653	212 aa		10.34	□□□□□ -0.75
HDLBP-231	ENST00000467435	PSPN	O60542	156 aa		10.34	□□□□□ -0.75
HDLBP-231	ENST00000467435	ZNF205	O95201	554 aa		10.34	□□□□□ -0.75
HDLBP-231	ENST00000467435	TFF1	P04155	84 aa		10.34	□□□□□ -0.75
HDLBP-231	ENST00000467435	CD55	P08174	381 aa		10.34	□□□□□ -0.75
HDLBP-231	ENST00000467435	ADH4	P08319	380 aa		10.34	□□□□□ -0.75
HDLBP-231	ENST00000467435	SCT	P09683	121 aa		10.34	□□□□□ -0.75
HDLBP-231	ENST00000467435	PI3	P19957	117 aa		10.34	□□□□□ -0.75
HDLBP-231	ENST00000467435	VAMP1	P23763	118 aa		10.34	□□□□□ -0.75
HDLBP-231	ENST00000467435	SERPINF1	P36955	418 aa		10.34	□□□□□ -0.75
HDLBP-231	ENST00000467435	RBMX	P38159	391 aa	Known RBP	10.34	□□□□□ -0.75
HDLBP-231	ENST00000467435	FXYD4	P59646	89 aa		10.34	□□□□□ -0.75
HDLBP-231	ENST00000467435	HERV-K104	P61576	105 aa		10.34	□□□□□ -0.75
HDLBP-231	ENST00000467435	COL10A1	Q03692	680 aa		10.34	□□□□□ -0.75
HDLBP-231	ENST00000467435	TFF3	Q07654	80 aa		10.34	□□□□□ -0.75
HDLBP-231	ENST00000467435	TESK1	Q15569	626 aa		10.34	□□□□□ -0.75
HDLBP-231	ENST00000467435	IGSF11	Q5DX21	431 aa		10.34	□□□□□ -0.75
HDLBP-231	ENST00000467435	DHRS11	Q6UWP2	260 aa		10.34	□□□□□ -0.75
HDLBP-231	ENST00000467435	NOXA1	Q86UR1	476 aa		10.34	□□□□□ -0.75
HDLBP-231	ENST00000467435	GAPT	Q8N292	157 aa		10.34	□□□□□ -0.75
HDLBP-231	ENST00000467435	UXS1	Q8NBZ7	420 aa		10.34	□□□□□ -0.75
HDLBP-231	ENST00000467435	TMEM185A	Q8NFB2	350 aa		10.34	□□□□□ -0.75
HDLBP-231	ENST00000467435	OR11L1	Q8NGX0	322 aa		10.34	□□□□□ -0.75
HDLBP-231	ENST00000467435	ERGIC1	Q969X5	290 aa		10.34	□□□□□ -0.75
HDLBP-231	ENST00000467435	MOB3A	Q96BX8	217 aa		10.34	□□□□□ -0.75
HDLBP-231	ENST00000467435	DHRS9	Q9BPW9	319 aa		10.34	□□□□□ -0.75
HDLBP-231	ENST00000467435	RTBDN	Q9BSG5	229 aa	Predicted RBP	10.34	□□□□□ -0.75
HDLBP-231	ENST00000467435	TMPRSS13	Q9BYE2	586 aa		10.34	□□□□□ -0.75
HDLBP-231	ENST00000467435	GCM1	Q9NP62	436 aa		10.34	□□□□□ -0.75
HDLBP-231	ENST00000467435	DYNLRB1	Q9NP97	96 aa		10.34	□□□□□ -0.75
HDLBP-231	ENST00000467435	RNF7	Q9UBF6	113 aa		10.34	□□□□□ -0.75
HDLBP-231	ENST00000467435	SLC23A1	Q9UHI7	598 aa		10.34	□□□□□ -0.75
HDLBP-231	ENST00000467435	MGAT4A	Q9UM21	535 aa		10.34	□□□□□ -0.75
HDLBP-231	ENST00000467435	WIPI2	Q9Y4P8	454 aa		10.34	□□□□□ -0.75
HDLBP-231	ENST00000467435	CAD	P27708	2225 aa		10.34	□□□□□ -0.75
HDLBP-231	ENST00000467435	DYSF	O75923	2080 aa		10.34	□□□□□ -0.75
HDLBP-231	ENST00000467435	PCNX1	Q96RV3	2341 aa		10.33	□□□□□ -0.76
HDLBP-231	ENST00000467435	IGHV3OR15-7	A0A075B7D8	119 aa		10.33	□□□□□ -0.76
HDLBP-231	ENST00000467435	BET1	O15155	118 aa		10.33	□□□□□ -0.76
HDLBP-231	ENST00000467435	SIAH2	O43255	324 aa		10.33	□□□□□ -0.76
HDLBP-231	ENST00000467435	PLAU	P00749	431 aa		10.33	□□□□□ -0.76
HDLBP-231	ENST00000467435	CTSD	P07339	412 aa	Predicted RBP	10.33	□□□□□ -0.76
HDLBP-231	ENST00000467435	CTXN2	P0C2S0	81 aa		10.33	□□□□□ -0.76
HDLBP-231	ENST00000467435	ZNF728	P0DKX0	622 aa		10.33	□□□□□ -0.76
HDLBP-231	ENST00000467435	PSG2	P11465	335 aa		10.33	□□□□□ -0.76
HDLBP-231	ENST00000467435	TNFRSF1A	P19438	455 aa		10.33	□□□□□ -0.76
HDLBP-231	ENST00000467435	AADAC	P22760	399 aa		10.33	□□□□□ -0.76
HDLBP-231	ENST00000467435	NFYA	P23511	347 aa	Predicted RBP	10.33	□□□□□ -0.76
HDLBP-231	ENST00000467435	CD80	P33681	288 aa		10.33	□□□□□ -0.76
HDLBP-231	ENST00000467435	OR3A1	P47881	315 aa		10.33	□□□□□ -0.76
HDLBP-231	ENST00000467435	KCNJ3	P48549	501 aa		10.33	□□□□□ -0.76
HDLBP-231	ENST00000467435	SEC61A1	P61619	476 aa	Known RBP	10.33	□□□□□ -0.76
HDLBP-231	ENST00000467435	IL13RA1	P78552	427 aa		10.33	□□□□□ -0.76
HDLBP-231	ENST00000467435	DHODH	Q02127	395 aa		10.33	□□□□□ -0.76
HDLBP-231	ENST00000467435	HERPUD1	Q15011	391 aa		10.33	□□□□□ -0.76
HDLBP-231	ENST00000467435	TMEM128	Q5BJH2	165 aa		10.33	□□□□□ -0.76
HDLBP-231	ENST00000467435	C11orf88	Q6PI97	169 aa		10.33	□□□□□ -0.76
HDLBP-231	ENST00000467435	NLRC3	Q7RTR2	1065 aa		10.33	□□□□□ -0.76
HDLBP-231	ENST00000467435	C5orf24	Q7Z6I8	188 aa		10.33	□□□□□ -0.76

Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms