RNA–Protein interactions for RNA: ENST00000452447.1

CHD3-206, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 5

Gene CHD3, Length 1,573 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-206ENST00000452447 COQ2Q96H96 371 aa10.36□□□□□ -0.75
CHD3-206ENST00000452447 AKR1E2Q96JD6 320 aa10.36□□□□□ -0.75
CHD3-206ENST00000452447 OR5M11Q96RB7 305 aa10.36□□□□□ -0.75
CHD3-206ENST00000452447 BARHL1Q9BZE3 327 aa10.36□□□□□ -0.75
CHD3-206ENST00000452447 TAS2R4Q9NYW5 299 aa10.36□□□□□ -0.75
CHD3-206ENST00000452447 FAM90A22PA8MWA6 464 aa10.35□□□□□ -0.75
CHD3-206ENST00000452447 ETV1P50549 477 aa10.35□□□□□ -0.75
CHD3-206ENST00000452447 BLCAPP62952 87 aa10.35□□□□□ -0.75
CHD3-206ENST00000452447 PPP3R1P63098 170 aa10.35□□□□□ -0.75
CHD3-206ENST00000452447 MED21Q13503 144 aa10.35□□□□□ -0.75
CHD3-206ENST00000452447 LRRC36Q1X8D7 754 aa10.35□□□□□ -0.75
CHD3-206ENST00000452447 OR2G6Q5TZ20 316 aa10.35□□□□□ -0.75
CHD3-206ENST00000452447 BAIAP2L2Q6UXY1 529 aa10.35□□□□□ -0.75
CHD3-206ENST00000452447 C1QL4Q86Z23 238 aa10.35□□□□□ -0.75
CHD3-206ENST00000452447 OR51T1Q8NGJ9 327 aa10.35□□□□□ -0.75
CHD3-206ENST00000452447 CNIH3Q8TBE1 160 aa10.35□□□□□ -0.75
CHD3-206ENST00000452447 TMEM106AQ96A25 262 aa10.35□□□□□ -0.75
CHD3-206ENST00000452447 ZNF286AQ9HBT8 521 aa10.35□□□□□ -0.75
CHD3-206ENST00000452447 CHCHD3Q9NX63 227 aaKnown RBP10.35□□□□□ -0.75
CHD3-206ENST00000452447 MEIKINA0A087WXM9 373 aa10.35□□□□□ -0.75
CHD3-206ENST00000452447 KBTBD11-OT1A0A1B0GTJ5 212 aa10.35□□□□□ -0.75
CHD3-206ENST00000452447 GABRPO00591 440 aa10.35□□□□□ -0.75
CHD3-206ENST00000452447 CLIC3O95833 236 aa10.35□□□□□ -0.75
CHD3-206ENST00000452447 IGLV1-47P01700 117 aa10.35□□□□□ -0.75
CHD3-206ENST00000452447 OPN1MWP04001 364 aa10.35□□□□□ -0.75
CHD3-206ENST00000452447 OPN1MW2P0DN77 364 aa10.35□□□□□ -0.75
CHD3-206ENST00000452447 OPN1MW3P0DN78 364 aa10.35□□□□□ -0.75
CHD3-206ENST00000452447 NFYBP25208 207 aa10.35□□□□□ -0.75
CHD3-206ENST00000452447 CD34P28906 385 aa10.35□□□□□ -0.75
CHD3-206ENST00000452447 C21orf33P30042 268 aaPredicted RBP10.35□□□□□ -0.75
CHD3-206ENST00000452447 GLP1RP43220 463 aa10.35□□□□□ -0.75
CHD3-206ENST00000452447 VDAC2P45880 294 aaPredicted RBP10.35□□□□□ -0.75
CHD3-206ENST00000452447 EMX1Q04741 257 aaPredicted RBP10.35□□□□□ -0.75
CHD3-206ENST00000452447 RBM39Q14498 530 aaKnown RBP10.35□□□□□ -0.75
CHD3-206ENST00000452447 NSUN5P1Q3KNT7 163 aa10.35□□□□□ -0.75
CHD3-206ENST00000452447 OGFRL1Q5TC84 451 aaPredicted RBP10.35□□□□□ -0.75
CHD3-206ENST00000452447 TTC23Q5W5X9 447 aa10.35□□□□□ -0.75
CHD3-206ENST00000452447 XAF1Q6GPH4 301 aa10.35□□□□□ -0.75
CHD3-206ENST00000452447 ZNF529Q6P280 563 aa10.35□□□□□ -0.75
CHD3-206ENST00000452447 C16orf82Q7Z2V1 217 aa10.35□□□□□ -0.75
CHD3-206ENST00000452447 SETD9Q8NE22 299 aa10.35□□□□□ -0.75
CHD3-206ENST00000452447 RGP1Q92546 391 aaPredicted RBP10.35□□□□□ -0.75
CHD3-206ENST00000452447 S100A13Q99584 98 aa10.35□□□□□ -0.75
CHD3-206ENST00000452447 PPIL3Q9H2H8 161 aaKnown RBP10.35□□□□□ -0.75
CHD3-206ENST00000452447 TMEM138Q9NPI0 162 aa10.35□□□□□ -0.75
CHD3-206ENST00000452447 BABAM2Q9NXR7 383 aa10.35□□□□□ -0.75
CHD3-206ENST00000452447 KIF25Q9UIL4 384 aa10.35□□□□□ -0.75
CHD3-206ENST00000452447 ZNF281Q9Y2X9 895 aa10.35□□□□□ -0.75
CHD3-206ENST00000452447 BUB1B-PAK6H3BSN5 160 aa10.34□□□□□ -0.75
CHD3-206ENST00000452447 HTR3BO95264 441 aa10.34□□□□□ -0.75
CHD3-206ENST00000452447 CSTBP04080 98 aaKnown RBP10.34□□□□□ -0.75
CHD3-206ENST00000452447 CD28P10747 220 aa10.34□□□□□ -0.75
CHD3-206ENST00000452447 CD24P25063 80 aa10.34□□□□□ -0.75
CHD3-206ENST00000452447 ZNF93P35789 620 aaPredicted RBP10.34□□□□□ -0.75
CHD3-206ENST00000452447 GDNFP39905 211 aa10.34□□□□□ -0.75
CHD3-206ENST00000452447 MNDAP41218 407 aa10.34□□□□□ -0.75
CHD3-206ENST00000452447 IL13RA2Q14627 380 aa10.34□□□□□ -0.75
CHD3-206ENST00000452447 C17orf58Q2M2W7 97 aa10.34□□□□□ -0.75
CHD3-206ENST00000452447 HLA-DRB5Q30154 266 aa10.34□□□□□ -0.75
CHD3-206ENST00000452447 PIGYQ3MUY2 71 aa10.34□□□□□ -0.75
CHD3-206ENST00000452447 DDI2Q5TDH0 399 aa10.34□□□□□ -0.75
CHD3-206ENST00000452447 CCDC144NLQ6NUI1 221 aa10.34□□□□□ -0.75
CHD3-206ENST00000452447 LYG1Q8N1E2 194 aa10.34□□□□□ -0.75
CHD3-206ENST00000452447 OR10K1Q8NGX5 313 aa10.34□□□□□ -0.75
CHD3-206ENST00000452447 OR9G1Q8NH87 305 aa10.34□□□□□ -0.75
CHD3-206ENST00000452447 SMIM19Q96E16 107 aa10.34□□□□□ -0.75
CHD3-206ENST00000452447 TMEM80Q96HE8 168 aa10.34□□□□□ -0.75
CHD3-206ENST00000452447 LIN7BQ9HAP6 207 aa10.34□□□□□ -0.75
CHD3-206ENST00000452447 NKX1-2Q9UD57 310 aaPredicted RBP10.34□□□□□ -0.75
CHD3-206ENST00000452447 ING4Q9UNL4 249 aa10.34□□□□□ -0.75
CHD3-206ENST00000452447 DIMT1Q9UNQ2 313 aaKnown RBP10.34□□□□□ -0.75
CHD3-206ENST00000452447 ST3GAL6Q9Y274 331 aa10.34□□□□□ -0.75
CHD3-206ENST00000452447 EXOSC1Q9Y3B2 195 aaKnown RBP10.34□□□□□ -0.75
CHD3-206ENST00000452447 A0A087X0M5 115 aa10.33□□□□□ -0.76
CHD3-206ENST00000452447 TRAV24A0A0B4J272 114 aa10.33□□□□□ -0.76
CHD3-206ENST00000452447 A0A1B0GX30 115 aa10.33□□□□□ -0.76
CHD3-206ENST00000452447 CDRT1O95170 752 aa10.33□□□□□ -0.76
CHD3-206ENST00000452447 BDKRB2P30411 391 aa10.33□□□□□ -0.76
CHD3-206ENST00000452447 OR3A4PP47883 348 aa10.33□□□□□ -0.76
CHD3-206ENST00000452447 KCNJ3P48549 501 aa10.33□□□□□ -0.76
CHD3-206ENST00000452447 Q6ZS46 218 aa10.33□□□□□ -0.76
CHD3-206ENST00000452447 Q8NFD4 153 aa10.33□□□□□ -0.76
CHD3-206ENST00000452447 KIRREL1Q96J84 757 aa10.33□□□□□ -0.76
CHD3-206ENST00000452447 SLC25A33Q9BSK2 321 aa10.33□□□□□ -0.76
CHD3-206ENST00000452447 WNT10AQ9GZT5 417 aa10.33□□□□□ -0.76
CHD3-206ENST00000452447 METTL9Q9H1A3 318 aa10.33□□□□□ -0.76
CHD3-206ENST00000452447 NCOR1P1Q9H4R4 102 aa10.33□□□□□ -0.76
CHD3-206ENST00000452447 Q9H521 79 aa10.33□□□□□ -0.76
CHD3-206ENST00000452447 PAK1IP1Q9NWT1 392 aaPredicted RBP10.33□□□□□ -0.76
CHD3-206ENST00000452447 CALYQ9NYX4 217 aa10.33□□□□□ -0.76
CHD3-206ENST00000452447 CKLFQ9UBR5 152 aa10.33□□□□□ -0.76
CHD3-206ENST00000452447 CLEC2DQ9UHP7 191 aa10.33□□□□□ -0.76
CHD3-206ENST00000452447 OGG1O15527 345 aa10.32□□□□□ -0.76
CHD3-206ENST00000452447 TMEM95Q3KNT9 176 aa10.32□□□□□ -0.76
CHD3-206ENST00000452447 TPTE2P1Q5T6R2 138 aa10.32□□□□□ -0.76
CHD3-206ENST00000452447 ASCL4Q6XD76 172 aa10.32□□□□□ -0.76
CHD3-206ENST00000452447 NDUFA11Q86Y39 141 aa10.32□□□□□ -0.76
CHD3-206ENST00000452447 OSR2Q8N2R0 312 aa10.32□□□□□ -0.76
CHD3-206ENST00000452447 DHRSXQ8N5I4 330 aa10.32□□□□□ -0.76
CHD3-206ENST00000452447 OR4F17Q8NGA8 305 aa10.32□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms