RNA–Protein interactions for RNA: ENST00000439958.7

CPSF7-205, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CPSF7, Length 3,524 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-205ENST00000439958 RFESDQ8TAC1 157 aa12.75□□□□□ -0.37
CPSF7-205ENST00000439958 TMEM171Q8WVE6 324 aa12.75□□□□□ -0.37
CPSF7-205ENST00000439958 SCGB3A2Q96PL1 93 aa12.75□□□□□ -0.37
CPSF7-205ENST00000439958 KCNS2Q9ULS6 477 aa12.75□□□□□ -0.37
CPSF7-205ENST00000439958 DPRXA6NFQ7 191 aa12.75□□□□□ -0.37
CPSF7-205ENST00000439958 HSD17B6O14756 317 aa12.75□□□□□ -0.37
CPSF7-205ENST00000439958 OR4A8P0C604 315 aa12.75□□□□□ -0.37
CPSF7-205ENST00000439958 ZNF16P17020 682 aaPredicted RBP12.75□□□□□ -0.37
CPSF7-205ENST00000439958 EDDM3BP56851 147 aa12.75□□□□□ -0.37
CPSF7-205ENST00000439958 SAXO1Q8IYX7 474 aa12.75□□□□□ -0.37
CPSF7-205ENST00000439958 LIME1Q9H400 295 aa12.75□□□□□ -0.37
CPSF7-205ENST00000439958 DYNLRB1Q9NP97 96 aa12.75□□□□□ -0.37
CPSF7-205ENST00000439958 GLS2Q9UI32 602 aa12.75□□□□□ -0.37
CPSF7-205ENST00000439958 EDARQ9UNE0 448 aa12.75□□□□□ -0.37
CPSF7-205ENST00000439958 CHD3Q12873 2000 aaKnown RBP12.75□□□□□ -0.37
CPSF7-205ENST00000439958 AADACP22760 399 aa12.75□□□□□ -0.37
CPSF7-205ENST00000439958 RPS23P62266 143 aaKnown RBP12.75□□□□□ -0.37
CPSF7-205ENST00000439958 TNFAIP6P98066 277 aaPredicted RBP12.75□□□□□ -0.37
CPSF7-205ENST00000439958 BEX5Q5H9J7 111 aa12.75□□□□□ -0.37
CPSF7-205ENST00000439958 AADACL3Q5VUY0 350 aa12.75□□□□□ -0.37
CPSF7-205ENST00000439958 TMEM211Q6ICI0 200 aa12.75□□□□□ -0.37
CPSF7-205ENST00000439958 SLC25A42Q86VD7 318 aa12.75□□□□□ -0.37
CPSF7-205ENST00000439958 RANBP3Q9H6Z4 567 aaPredicted RBP12.75□□□□□ -0.37
CPSF7-205ENST00000439958 SLC33A1O00400 549 aaPredicted RBP12.74□□□□□ -0.37
CPSF7-205ENST00000439958 DIRAS3O95661 229 aa12.74□□□□□ -0.37
CPSF7-205ENST00000439958 PTBP3O95758 552 aaKnown RBP12.74□□□□□ -0.37
CPSF7-205ENST00000439958 DTYMKP23919 212 aa12.74□□□□□ -0.37
CPSF7-205ENST00000439958 WDR82Q6UXN9 313 aa12.74□□□□□ -0.37
CPSF7-205ENST00000439958 ZDHHC22Q8N966 263 aa12.74□□□□□ -0.37
CPSF7-205ENST00000439958 SCGB1D2O95969 90 aa12.74□□□□□ -0.37
CPSF7-205ENST00000439958 PGA5P0DJD9 388 aa12.74□□□□□ -0.37
CPSF7-205ENST00000439958 TMEM128Q5BJH2 165 aa12.74□□□□□ -0.37
CPSF7-205ENST00000439958 CLEC18BQ6UXF7 455 aa12.74□□□□□ -0.37
CPSF7-205ENST00000439958 OR8H1Q8NGG4 311 aa12.74□□□□□ -0.37
CPSF7-205ENST00000439958 NRIP2Q9BQI9 281 aa12.74□□□□□ -0.37
CPSF7-205ENST00000439958 CFAP46Q8IYW2 2715 aa12.74□□□□□ -0.37
CPSF7-205ENST00000439958 KCNAB3O43448 404 aa12.74□□□□□ -0.37
CPSF7-205ENST00000439958 FPR2P25090 351 aa12.74□□□□□ -0.37
CPSF7-205ENST00000439958 S100A10P60903 97 aa12.74□□□□□ -0.37
CPSF7-205ENST00000439958 ELP2Q6IA86 826 aa12.74□□□□□ -0.37
CPSF7-205ENST00000439958 SGPP2Q8IWX5 399 aa12.74□□□□□ -0.37
CPSF7-205ENST00000439958 Q8IYB0 196 aa12.74□□□□□ -0.37
CPSF7-205ENST00000439958 GALNT11Q8NCW6 608 aa12.74□□□□□ -0.37
CPSF7-205ENST00000439958 SLC2A8Q9NY64 477 aa12.74□□□□□ -0.37
CPSF7-205ENST00000439958 RDH8Q9NYR8 311 aa12.74□□□□□ -0.37
CPSF7-205ENST00000439958 METRNQ9UJH8 293 aa12.74□□□□□ -0.37
CPSF7-205ENST00000439958 IGSF10Q6WRI0 2623 aa12.74□□□□□ -0.37
CPSF7-205ENST00000439958 PTAFRP25105 342 aa12.73□□□□□ -0.37
CPSF7-205ENST00000439958 DAZAP2Q15038 168 aaPredicted RBP12.73□□□□□ -0.37
CPSF7-205ENST00000439958 SMIM21Q3B7S5 101 aa12.73□□□□□ -0.37
CPSF7-205ENST00000439958 Q6ZPA2 131 aa12.73□□□□□ -0.37
CPSF7-205ENST00000439958 DNTTIP1Q9H147 329 aa12.73□□□□□ -0.37
CPSF7-205ENST00000439958 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP12.73□□□□□ -0.37
CPSF7-205ENST00000439958 ELOVL5Q9NYP7 299 aa12.73□□□□□ -0.37
CPSF7-205ENST00000439958 GPR132Q9UNW8 380 aa12.73□□□□□ -0.37
CPSF7-205ENST00000439958 ZNF835Q9Y2P0 537 aa12.73□□□□□ -0.37
CPSF7-205ENST00000439958 PSPNO60542 156 aa12.73□□□□□ -0.37
CPSF7-205ENST00000439958 CYB5R3P00387 301 aaPredicted RBP12.73□□□□□ -0.37
CPSF7-205ENST00000439958 ZMYND11Q15326 602 aa12.73□□□□□ -0.37
CPSF7-205ENST00000439958 GRK1Q15835 563 aa12.73□□□□□ -0.37
CPSF7-205ENST00000439958 PLPPR1Q8TBJ4 325 aa12.73□□□□□ -0.37
CPSF7-205ENST00000439958 MRGPRDQ8TDS7 321 aa12.73□□□□□ -0.37
CPSF7-205ENST00000439958 PCNPQ8WW12 178 aaKnown RBP12.73□□□□□ -0.37
CPSF7-205ENST00000439958 MED30Q96HR3 178 aa12.73□□□□□ -0.37
CPSF7-205ENST00000439958 TMEM165Q9HC07 324 aa12.73□□□□□ -0.37
CPSF7-205ENST00000439958 NGBQ9NPG2 151 aa12.73□□□□□ -0.37
CPSF7-205ENST00000439958 KIF25Q9UIL4 384 aa12.73□□□□□ -0.37
CPSF7-205ENST00000439958 TMEM210A6NLX4 147 aa12.72□□□□□ -0.37
CPSF7-205ENST00000439958 KITLGP21583 273 aa12.72□□□□□ -0.37
CPSF7-205ENST00000439958 CD80P33681 288 aa12.72□□□□□ -0.37
CPSF7-205ENST00000439958 SERPINF1P36955 418 aa12.72□□□□□ -0.37
CPSF7-205ENST00000439958 CA7P43166 264 aa12.72□□□□□ -0.37
CPSF7-205ENST00000439958 TAS2R31P59538 309 aa12.72□□□□□ -0.37
CPSF7-205ENST00000439958 TGIF2LYQ8IUE0 185 aa12.72□□□□□ -0.37
CPSF7-205ENST00000439958 RTN4IP1Q8WWV3 396 aaPredicted RBP12.72□□□□□ -0.37
CPSF7-205ENST00000439958 VRK1Q99986 396 aaPredicted RBP12.72□□□□□ -0.37
CPSF7-205ENST00000439958 NDRG3Q9UGV2 375 aa12.72□□□□□ -0.37
CPSF7-205ENST00000439958 TUBD1Q9UJT1 453 aa12.72□□□□□ -0.37
CPSF7-205ENST00000439958 NAT1P18440 290 aa12.72□□□□□ -0.37
CPSF7-205ENST00000439958 TNFSF4P23510 183 aa12.72□□□□□ -0.37
CPSF7-205ENST00000439958 ZBTB25P24278 435 aa12.72□□□□□ -0.37
CPSF7-205ENST00000439958 COL10A1Q03692 680 aa12.72□□□□□ -0.37
CPSF7-205ENST00000439958 MBNL2Q5VZF2 373 aaKnown RBP12.72□□□□□ -0.37
CPSF7-205ENST00000439958 OR10J5Q8NHC4 309 aa12.72□□□□□ -0.37
CPSF7-205ENST00000439958 CCL17Q92583 94 aa12.72□□□□□ -0.37
CPSF7-205ENST00000439958 SLC5A7Q9GZV3 580 aa12.72□□□□□ -0.37
CPSF7-205ENST00000439958 CENPEQ02224 2701 aa12.72□□□□□ -0.37
CPSF7-205ENST00000439958 THBDP07204 575 aa12.72□□□□□ -0.37
CPSF7-205ENST00000439958 MPZP25189 248 aa12.72□□□□□ -0.37
CPSF7-205ENST00000439958 RAP2BP61225 183 aa12.72□□□□□ -0.37
CPSF7-205ENST00000439958 SPERTQ8NA61 448 aa12.72□□□□□ -0.37
CPSF7-205ENST00000439958 ZNRF1Q8ND25 227 aa12.72□□□□□ -0.37
CPSF7-205ENST00000439958 OR51H1Q8NH63 302 aa12.72□□□□□ -0.37
CPSF7-205ENST00000439958 RTBDNQ9BSG5 229 aaPredicted RBP12.72□□□□□ -0.37
CPSF7-205ENST00000439958 DCTN5Q9BTE1 182 aa12.72□□□□□ -0.37
CPSF7-205ENST00000439958 DCAF16Q9NXF7 216 aa12.72□□□□□ -0.37
CPSF7-205ENST00000439958 RNF150Q9ULK6 438 aa12.72□□□□□ -0.37
CPSF7-205ENST00000439958 IGHV3-43A0A0B4J1X8 118 aa12.71□□□□□ -0.37
CPSF7-205ENST00000439958 KIR2DS1A0A191URI9 304 aa12.71□□□□□ -0.37
CPSF7-205ENST00000439958 PHF1O43189 567 aaPredicted RBP12.71□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 60.7 ms