RNA–Protein interactions for RNA: ENST00000438700.7

PTCHD3-201, Transcript of patched domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTCHD3, Length 2,529 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD3-201ENST00000438700 NDUFS6O75380 124 aaKnown RBP11.93□□□□□ -0.5
PTCHD3-201ENST00000438700 S100A6P06703 90 aa11.93□□□□□ -0.5
PTCHD3-201ENST00000438700 SNRNP70P08621 437 aaKnown RBP11.93□□□□□ -0.5
PTCHD3-201ENST00000438700 PPA1Q15181 289 aa11.93□□□□□ -0.5
PTCHD3-201ENST00000438700 NRN1LQ496H8 165 aa11.93□□□□□ -0.5
PTCHD3-201ENST00000438700 MARS2Q96GW9 593 aaKnown RBP11.93□□□□□ -0.5
PTCHD3-201ENST00000438700 PAPOLGQ9BWT3 736 aaKnown RBP11.93□□□□□ -0.5
PTCHD3-201ENST00000438700 SMIM3Q9BZL3 60 aa11.93□□□□□ -0.5
PTCHD3-201ENST00000438700 PRDM14Q9GZV8 571 aa11.93□□□□□ -0.5
PTCHD3-201ENST00000438700 PRSS50Q9UI38 385 aa11.93□□□□□ -0.5
PTCHD3-201ENST00000438700 SPENQ96T58 3664 aaKnown RBP11.93□□□□□ -0.5
PTCHD3-201ENST00000438700 ZNF816-ZNF321PA0A0X1KG74 233 aa11.93□□□□□ -0.5
PTCHD3-201ENST00000438700 hCG_1809904A0A1W2PP81 198 aa11.93□□□□□ -0.5
PTCHD3-201ENST00000438700 A0A1W2PR64 198 aa11.93□□□□□ -0.5
PTCHD3-201ENST00000438700 A0A1W2PRV1 198 aa11.93□□□□□ -0.5
PTCHD3-201ENST00000438700 C5orf49A4QMS7 147 aa11.93□□□□□ -0.5
PTCHD3-201ENST00000438700 CA11O75493 328 aa11.93□□□□□ -0.5
PTCHD3-201ENST00000438700 IFNA2P01563 188 aa11.93□□□□□ -0.5
PTCHD3-201ENST00000438700 CD5P06127 495 aa11.93□□□□□ -0.5
PTCHD3-201ENST00000438700 FUT6P51993 359 aa11.93□□□□□ -0.5
PTCHD3-201ENST00000438700 FXYD4P59646 89 aa11.93□□□□□ -0.5
PTCHD3-201ENST00000438700 KRBOX4Q5JUW0 171 aa11.93□□□□□ -0.5
PTCHD3-201ENST00000438700 SLC25A26Q70HW3 274 aa11.93□□□□□ -0.5
PTCHD3-201ENST00000438700 P4HA3Q7Z4N8 544 aa11.93□□□□□ -0.5
PTCHD3-201ENST00000438700 ZNF611Q8N823 705 aa11.93□□□□□ -0.5
PTCHD3-201ENST00000438700 OR56B2PQ8NGI1 322 aa11.93□□□□□ -0.5
PTCHD3-201ENST00000438700 TAAR6Q96RI8 345 aa11.93□□□□□ -0.5
PTCHD3-201ENST00000438700 TAF9BQ9HBM6 251 aa11.93□□□□□ -0.5
PTCHD3-201ENST00000438700 CACFD1Q9UGQ2 172 aa11.93□□□□□ -0.5
PTCHD3-201ENST00000438700 ZNF391Q9UJN7 358 aa11.93□□□□□ -0.5
PTCHD3-201ENST00000438700 ACACAQ13085 2346 aa11.92□□□□□ -0.5
PTCHD3-201ENST00000438700 MED19A0JLT2 244 aaPredicted RBP11.92□□□□□ -0.5
PTCHD3-201ENST00000438700 C1orf196B1AJZ1 125 aa11.92□□□□□ -0.5
PTCHD3-201ENST00000438700 XRCC2O43543 280 aa11.92□□□□□ -0.5
PTCHD3-201ENST00000438700 RBMXP38159 391 aaKnown RBP11.92□□□□□ -0.5
PTCHD3-201ENST00000438700 NPBWR2P48146 333 aa11.92□□□□□ -0.5
PTCHD3-201ENST00000438700 SURF2Q15527 256 aaPredicted RBP11.92□□□□□ -0.5
PTCHD3-201ENST00000438700 FAM76BQ5HYJ3 339 aa11.92□□□□□ -0.5
PTCHD3-201ENST00000438700 PRSS54Q6PEW0 395 aa11.92□□□□□ -0.5
PTCHD3-201ENST00000438700 IGFL3Q6UXB1 125 aa11.92□□□□□ -0.5
PTCHD3-201ENST00000438700 KIRREL1Q96J84 757 aa11.92□□□□□ -0.5
PTCHD3-201ENST00000438700 C1QTNF5Q9BXJ0 243 aa11.92□□□□□ -0.5
PTCHD3-201ENST00000438700 SMCO4Q9NRQ5 59 aa11.92□□□□□ -0.5
PTCHD3-201ENST00000438700 CRIM1Q9NZV1 1036 aa11.92□□□□□ -0.5
PTCHD3-201ENST00000438700 HSF4Q9ULV5 492 aa11.92□□□□□ -0.5
PTCHD3-201ENST00000438700 SVILO95425 2214 aa11.92□□□□□ -0.5
PTCHD3-201ENST00000438700 A0A1W2PPH5 198 aa11.92□□□□□ -0.5
PTCHD3-201ENST00000438700 OR7C1O76099 320 aaPredicted RBP11.92□□□□□ -0.5
PTCHD3-201ENST00000438700 GLI4P10075 376 aa11.92□□□□□ -0.5
PTCHD3-201ENST00000438700 NQO2P16083 231 aa11.92□□□□□ -0.5
PTCHD3-201ENST00000438700 SLC22A25Q6T423 547 aa11.92□□□□□ -0.5
PTCHD3-201ENST00000438700 BTNL8Q6UX41 500 aa11.92□□□□□ -0.5
PTCHD3-201ENST00000438700 C2orf50Q96LR7 162 aa11.92□□□□□ -0.5
PTCHD3-201ENST00000438700 ZNF251Q9BRH9 671 aa11.92□□□□□ -0.5
PTCHD3-201ENST00000438700 CLCF1Q9UBD9 225 aa11.92□□□□□ -0.5
PTCHD3-201ENST00000438700 ANKRD11Q6UB99 2663 aaPredicted RBP11.92□□□□□ -0.5
PTCHD3-201ENST00000438700 BOD1L1Q8NFC6 3051 aa11.92□□□□□ -0.5
PTCHD3-201ENST00000438700 UBE2CO00762 179 aa11.91□□□□□ -0.5
PTCHD3-201ENST00000438700 AQP7O14520 342 aa11.91□□□□□ -0.5
PTCHD3-201ENST00000438700 RRP8O43159 456 aaKnown RBP11.91□□□□□ -0.5
PTCHD3-201ENST00000438700 ARG1P05089 322 aa11.91□□□□□ -0.5
PTCHD3-201ENST00000438700 S100A9P06702 114 aaKnown RBP11.91□□□□□ -0.5
PTCHD3-201ENST00000438700 PIGPP57054 158 aa11.91□□□□□ -0.5
PTCHD3-201ENST00000438700 OR2B8PP59922 312 aa11.91□□□□□ -0.5
PTCHD3-201ENST00000438700 SP6Q3SY56 376 aa11.91□□□□□ -0.5
PTCHD3-201ENST00000438700 ASCL4Q6XD76 172 aa11.91□□□□□ -0.5
PTCHD3-201ENST00000438700 Q6ZRG5 221 aa11.91□□□□□ -0.5
PTCHD3-201ENST00000438700 SGPP2Q8IWX5 399 aa11.91□□□□□ -0.5
PTCHD3-201ENST00000438700 POC1AQ8NBT0 407 aa11.91□□□□□ -0.5
PTCHD3-201ENST00000438700 TRIB1Q96RU8 372 aa11.91□□□□□ -0.5
PTCHD3-201ENST00000438700 NECAP2Q9NVZ3 263 aa11.91□□□□□ -0.5
PTCHD3-201ENST00000438700 AMDHD2Q9Y303 409 aa11.91□□□□□ -0.5
PTCHD3-201ENST00000438700 K7EM74 188 aa11.91□□□□□ -0.5
PTCHD3-201ENST00000438700 IAH1Q2TAA2 248 aaPredicted RBP11.91□□□□□ -0.5
PTCHD3-201ENST00000438700 AQP10Q96PS8 301 aa11.91□□□□□ -0.5
PTCHD3-201ENST00000438700 EGLN1Q9GZT9 426 aa11.91□□□□□ -0.5
PTCHD3-201ENST00000438700 SMIM6P0DI80 62 aa11.9□□□□□ -0.5
PTCHD3-201ENST00000438700 FOLR2P14207 255 aa11.9□□□□□ -0.5
PTCHD3-201ENST00000438700 FHITP49789 147 aa11.9□□□□□ -0.5
PTCHD3-201ENST00000438700 RBM11P57052 281 aaKnown RBP11.9□□□□□ -0.5
PTCHD3-201ENST00000438700 AWAT1Q58HT5 328 aa11.9□□□□□ -0.5
PTCHD3-201ENST00000438700 Q6ZPA2 131 aa11.9□□□□□ -0.5
PTCHD3-201ENST00000438700 GCNT2Q8N0V5 402 aa11.9□□□□□ -0.5
PTCHD3-201ENST00000438700 SPSB4Q96A44 273 aa11.9□□□□□ -0.5
PTCHD3-201ENST00000438700 GMPPAQ96IJ6 420 aaPredicted RBP11.9□□□□□ -0.5
PTCHD3-201ENST00000438700 ZNF442Q9H7R0 627 aa11.9□□□□□ -0.5
PTCHD3-201ENST00000438700 SEBOXQ9HB31 216 aaPredicted RBP11.9□□□□□ -0.5
PTCHD3-201ENST00000438700 GP6Q9HCN6 339 aa11.9□□□□□ -0.5
PTCHD3-201ENST00000438700 C1orf123Q9NWV4 160 aa11.9□□□□□ -0.5
PTCHD3-201ENST00000438700 NUDT19A8MXV4 375 aa11.9□□□□□ -0.5
PTCHD3-201ENST00000438700 CTSDP07339 412 aaPredicted RBP11.9□□□□□ -0.5
PTCHD3-201ENST00000438700 OR8U8P0C7N1 319 aa11.9□□□□□ -0.5
PTCHD3-201ENST00000438700 HKR1P10072 659 aa11.9□□□□□ -0.5
PTCHD3-201ENST00000438700 DTYMKP23919 212 aa11.9□□□□□ -0.5
PTCHD3-201ENST00000438700 GPM6AP51674 278 aa11.9□□□□□ -0.5
PTCHD3-201ENST00000438700 PHLDA2Q53GA4 152 aa11.9□□□□□ -0.5
PTCHD3-201ENST00000438700 ADAM5Q6NVV9 412 aa11.9□□□□□ -0.5
PTCHD3-201ENST00000438700 SARAFQ96BY9 339 aa11.9□□□□□ -0.5
PTCHD3-201ENST00000438700 BSCL2Q96G97 398 aaPredicted RBP11.9□□□□□ -0.5
PTCHD3-201ENST00000438700 OR51B6Q9H340 312 aa11.9□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms