RNA–Protein interactions for RNA: ENST00000409285.6

VSX1-203, Transcript of visual system homeobox 1, humanhuman

TSL 1 (best)

Gene VSX1, Length 1,486 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VSX1-203ENST00000409285 KCNK7Q9Y2U2 307 aa17■□□□□ 0.31
VSX1-203ENST00000409285 MED13LQ71F56 2210 aa16.99■□□□□ 0.31
VSX1-203ENST00000409285 FAM25AB3EWG3 89 aa16.99■□□□□ 0.31
VSX1-203ENST00000409285 FAM25CB3EWG5 89 aa16.99■□□□□ 0.31
VSX1-203ENST00000409285 FAM25GB3EWG6 89 aa16.99■□□□□ 0.31
VSX1-203ENST00000409285 HEXAP06865 529 aa16.99■□□□□ 0.31
VSX1-203ENST00000409285 ERP29P30040 261 aaKnown RBP16.99■□□□□ 0.31
VSX1-203ENST00000409285 ETV6P41212 452 aa16.99■□□□□ 0.31
VSX1-203ENST00000409285 GRK1Q15835 563 aa16.99■□□□□ 0.31
VSX1-203ENST00000409285 ZNF260Q3ZCT1 412 aa16.99■□□□□ 0.31
VSX1-203ENST00000409285 NKAPLQ5M9Q1 402 aa16.99■□□□□ 0.31
VSX1-203ENST00000409285 OR4M1Q8NGD0 313 aa16.99■□□□□ 0.31
VSX1-203ENST00000409285 NCOR1P1Q9H4R4 102 aa16.99■□□□□ 0.31
VSX1-203ENST00000409285 CLN8Q9UBY8 286 aa16.99■□□□□ 0.31
VSX1-203ENST00000409285 ARHGAP32A7KAX9 2087 aa16.99■□□□□ 0.31
VSX1-203ENST00000409285 POM121CA8CG34 1229 aa16.99■□□□□ 0.31
VSX1-203ENST00000409285 MELTFP08582 738 aa16.99■□□□□ 0.31
VSX1-203ENST00000409285 ESCO2Q56NI9 601 aa16.99■□□□□ 0.31
VSX1-203ENST00000409285 WDR25Q64LD2 544 aaPredicted RBP16.99■□□□□ 0.31
VSX1-203ENST00000409285 CCDC190Q86UF4 302 aa16.99■□□□□ 0.31
VSX1-203ENST00000409285 DIRAS2Q96HU8 199 aa16.99■□□□□ 0.31
VSX1-203ENST00000409285 SSBP3Q9BWW4 388 aaPredicted RBP16.99■□□□□ 0.31
VSX1-203ENST00000409285 CHST6Q9GZX3 395 aa16.99■□□□□ 0.31
VSX1-203ENST00000409285 WNK2Q9Y3S1 2297 aa16.98■□□□□ 0.31
VSX1-203ENST00000409285 HSPB6O14558 160 aa16.98■□□□□ 0.31
VSX1-203ENST00000409285 TAS2R20P59543 309 aa16.98■□□□□ 0.31
VSX1-203ENST00000409285 PNLIPRP3Q17RR3 467 aa16.98■□□□□ 0.31
VSX1-203ENST00000409285 HACD4Q5VWC8 232 aa16.98■□□□□ 0.31
VSX1-203ENST00000409285 SLC35E4Q6ICL7 350 aa16.98■□□□□ 0.31
VSX1-203ENST00000409285 ZNF497Q6ZNH5 498 aa16.98■□□□□ 0.31
VSX1-203ENST00000409285 GDPD3Q7L5L3 318 aa16.98■□□□□ 0.31
VSX1-203ENST00000409285 RTN4RL2Q86UN3 420 aa16.98■□□□□ 0.31
VSX1-203ENST00000409285 BPIFB2Q8N4F0 458 aa16.98■□□□□ 0.31
VSX1-203ENST00000409285 WFDC11Q8NEX6 87 aa16.98■□□□□ 0.31
VSX1-203ENST00000409285 C15orf40Q8WUR7 153 aa16.98■□□□□ 0.31
VSX1-203ENST00000409285 COQ2Q96H96 371 aa16.98■□□□□ 0.31
VSX1-203ENST00000409285 C1orf159Q96HA4 380 aa16.98■□□□□ 0.31
VSX1-203ENST00000409285 SOSTQ9BQB4 213 aa16.98■□□□□ 0.31
VSX1-203ENST00000409285 FAAP24Q9BTP7 215 aa16.98■□□□□ 0.31
VSX1-203ENST00000409285 REG4Q9BYZ8 158 aa16.98■□□□□ 0.31
VSX1-203ENST00000409285 AUNIPQ9H7T9 357 aa16.98■□□□□ 0.31
VSX1-203ENST00000409285 TRAV18A0A075B6X5 111 aa16.97■□□□□ 0.31
VSX1-203ENST00000409285 TRBV23-1A0A0A0MS06 115 aa16.97■□□□□ 0.31
VSX1-203ENST00000409285 FUOMA2VDF0 154 aa16.97■□□□□ 0.31
VSX1-203ENST00000409285 HLA-DQB1P01920 261 aa16.97■□□□□ 0.31
VSX1-203ENST00000409285 GNB3P16520 340 aa16.97■□□□□ 0.31
VSX1-203ENST00000409285 SEC61A1P61619 476 aaKnown RBP16.97■□□□□ 0.31
VSX1-203ENST00000409285 GNB2P62879 340 aa16.97■□□□□ 0.31
VSX1-203ENST00000409285 ATXN7L3Q14CW9 347 aaPredicted RBP16.97■□□□□ 0.31
VSX1-203ENST00000409285 CDNFQ49AH0 187 aa16.97■□□□□ 0.31
VSX1-203ENST00000409285 RSBN1Q5VWQ0 802 aaPredicted RBP16.97■□□□□ 0.31
VSX1-203ENST00000409285 BRICD5Q6PL45 260 aa16.97■□□□□ 0.31
VSX1-203ENST00000409285 NEK7Q8TDX7 302 aa16.97■□□□□ 0.31
VSX1-203ENST00000409285 RIMS4Q9H426 269 aaPredicted RBP16.97■□□□□ 0.31
VSX1-203ENST00000409285 ETAA1Q9NY74 926 aa16.97■□□□□ 0.31
VSX1-203ENST00000409285 POLR3KQ9Y2Y1 108 aaPredicted RBP16.97■□□□□ 0.31
VSX1-203ENST00000409285 KIAA1324LA8MWY0 1029 aaPredicted RBP16.96■□□□□ 0.31
VSX1-203ENST00000409285 H7C1Q1 480 aa16.96■□□□□ 0.31
VSX1-203ENST00000409285 ECDO95905 644 aaPredicted RBP16.96■□□□□ 0.31
VSX1-203ENST00000409285 NAPSAO96009 420 aa16.96■□□□□ 0.31
VSX1-203ENST00000409285 PTBP1P26599 531 aaKnown RBP eCLIP16.96■□□□□ 0.31
VSX1-203ENST00000409285 P2RX3P56373 397 aa16.96■□□□□ 0.31
VSX1-203ENST00000409285 PITPNAQ00169 270 aa16.96■□□□□ 0.31
VSX1-203ENST00000409285 LSAMPQ13449 338 aa16.96■□□□□ 0.31
VSX1-203ENST00000409285 C8orf46Q8TAG6 207 aa16.96■□□□□ 0.31
VSX1-203ENST00000409285 PLPPR1Q8TBJ4 325 aa16.96■□□□□ 0.31
VSX1-203ENST00000409285 DMRTB1Q96MA1 342 aa16.96■□□□□ 0.31
VSX1-203ENST00000409285 ZMAT3Q9HA38 289 aaKnown RBP16.96■□□□□ 0.31
VSX1-203ENST00000409285 C12orf4Q9NQ89 552 aa16.96■□□□□ 0.31
VSX1-203ENST00000409285 LPAR3Q9UBY5 353 aa16.96■□□□□ 0.31
VSX1-203ENST00000409285 AK3Q9UIJ7 227 aa16.96■□□□□ 0.31
VSX1-203ENST00000409285 V9GYH0 126 aa16.96■□□□□ 0.31
VSX1-203ENST00000409285 TRBV6-6A0A0A6YYG2 114 aa16.95■□□□□ 0.3
VSX1-203ENST00000409285 TMEM235A6NFC5 223 aa16.95■□□□□ 0.3
VSX1-203ENST00000409285 NDUFB7P17568 137 aa16.95■□□□□ 0.3
VSX1-203ENST00000409285 IL2RGP31785 369 aa16.95■□□□□ 0.3
VSX1-203ENST00000409285 MEF2CQ06413 473 aaPredicted RBP16.95■□□□□ 0.3
VSX1-203ENST00000409285 KRBOX4Q5JUW0 171 aa16.95■□□□□ 0.3
VSX1-203ENST00000409285 SPANXN2Q5MJ10 180 aa16.95■□□□□ 0.3
VSX1-203ENST00000409285 OLFML2AQ68BL7 652 aa16.95■□□□□ 0.3
VSX1-203ENST00000409285 IZUMO1Q8IYV9 350 aa16.95■□□□□ 0.3
VSX1-203ENST00000409285 FGFRL1Q8N441 504 aa16.95■□□□□ 0.3
VSX1-203ENST00000409285 CYYR1Q96J86 154 aa16.95■□□□□ 0.3
VSX1-203ENST00000409285 TMEM30CPA0ZSE6 113 aa16.94■□□□□ 0.3
VSX1-203ENST00000409285 UBE2QL1A1L167 161 aa16.94■□□□□ 0.3
VSX1-203ENST00000409285 RNF223E7ERA6 249 aa16.94■□□□□ 0.3
VSX1-203ENST00000409285 FOXH1O75593 365 aa16.94■□□□□ 0.3
VSX1-203ENST00000409285 AESQ08117 197 aa16.94■□□□□ 0.3
VSX1-203ENST00000409285 CD276Q5ZPR3 534 aa16.94■□□□□ 0.3
VSX1-203ENST00000409285 PYHIN1Q6K0P9 492 aa16.94■□□□□ 0.3
VSX1-203ENST00000409285 DYRK2Q92630 601 aa16.94■□□□□ 0.3
VSX1-203ENST00000409285 DCTN5Q9BTE1 182 aa16.94■□□□□ 0.3
VSX1-203ENST00000409285 ODAMA1E959 279 aa16.93■□□□□ 0.3
VSX1-203ENST00000409285 FABP12A6NFH5 140 aa16.93■□□□□ 0.3
VSX1-203ENST00000409285 CD3GP09693 182 aa16.93■□□□□ 0.3
VSX1-203ENST00000409285 MRPS10P82664 201 aaKnown RBP16.93■□□□□ 0.3
VSX1-203ENST00000409285 EDDM3AQ14507 147 aa16.93■□□□□ 0.3
VSX1-203ENST00000409285 CR1LQ2VPA4 569 aa16.93■□□□□ 0.3
VSX1-203ENST00000409285 SPNS3Q6ZMD2 512 aa16.93■□□□□ 0.3
VSX1-203ENST00000409285 MRPL30Q8TCC3 161 aaKnown RBP16.93■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 56 ms