RNA–Protein interactions for RNA: ENST00000406134.5

MSH2-202, Transcript of mutS homolog 2, humanhuman

TSL 1 (best) BASIC

Gene MSH2, Length 3,628 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH2-202ENST00000406134 RNPS1Q15287 305 aaKnown RBP8.42□□□□□ -1.06
MSH2-202ENST00000406134 OR56B2PQ8NGI1 322 aa8.42□□□□□ -1.06
MSH2-202ENST00000406134 SYT3Q9BQG1 590 aa8.42□□□□□ -1.06
MSH2-202ENST00000406134 BCL2L14Q9BZR8 327 aa8.42□□□□□ -1.06
MSH2-202ENST00000406134 ZNF552Q9H707 407 aaPredicted RBP8.42□□□□□ -1.06
MSH2-202ENST00000406134 RNF115Q9Y4L5 304 aa8.42□□□□□ -1.06
MSH2-202ENST00000406134 PRRC2CQ9Y520 2896 aaKnown RBP8.42□□□□□ -1.06
MSH2-202ENST00000406134 DOCK7Q96N67 2140 aa8.42□□□□□ -1.06
MSH2-202ENST00000406134 FUT3P21217 361 aa8.42□□□□□ -1.06
MSH2-202ENST00000406134 DUSP1P28562 367 aa8.42□□□□□ -1.06
MSH2-202ENST00000406134 TBC1D26Q86UD7 250 aa8.42□□□□□ -1.06
MSH2-202ENST00000406134 LINC00470Q9BZP3 86 aa8.42□□□□□ -1.06
MSH2-202ENST00000406134 ZNF286AQ9HBT8 521 aa8.42□□□□□ -1.06
MSH2-202ENST00000406134 C9orf172C9J069 976 aa8.42□□□□□ -1.06
MSH2-202ENST00000406134 H7C2Y5 167 aa8.42□□□□□ -1.06
MSH2-202ENST00000406134 NGFP01138 241 aa8.42□□□□□ -1.06
MSH2-202ENST00000406134 RND3P61587 244 aa8.42□□□□□ -1.06
MSH2-202ENST00000406134 TSC22D1Q15714 1073 aa8.42□□□□□ -1.06
MSH2-202ENST00000406134 GPR157Q5UAW9 335 aa8.42□□□□□ -1.06
MSH2-202ENST00000406134 CPNE4Q96A23 557 aaPredicted RBP8.42□□□□□ -1.06
MSH2-202ENST00000406134 TAAR3PQ9P1P4 343 aa8.42□□□□□ -1.06
MSH2-202ENST00000406134 A0A096LPE4 126 aa8.41□□□□□ -1.06
MSH2-202ENST00000406134 A0A1W2PPZ6 126 aa8.41□□□□□ -1.06
MSH2-202ENST00000406134 FGF12P61328 243 aa8.41□□□□□ -1.06
MSH2-202ENST00000406134 PRDX4Q13162 271 aa8.41□□□□□ -1.06
MSH2-202ENST00000406134 ZNF124Q15973 351 aa8.41□□□□□ -1.06
MSH2-202ENST00000406134 AWAT1Q58HT5 328 aa8.41□□□□□ -1.06
MSH2-202ENST00000406134 ZNF880Q6PDB4 577 aa8.41□□□□□ -1.06
MSH2-202ENST00000406134 EXTL1Q92935 676 aa8.41□□□□□ -1.06
MSH2-202ENST00000406134 C19orf12Q9NSK7 152 aa8.41□□□□□ -1.06
MSH2-202ENST00000406134 SYNGR1O43759 233 aa8.41□□□□□ -1.06
MSH2-202ENST00000406134 CDS2O95674 445 aa8.41□□□□□ -1.06
MSH2-202ENST00000406134 IFNA21P01568 189 aa8.41□□□□□ -1.06
MSH2-202ENST00000406134 GDF1P27539 372 aa8.41□□□□□ -1.06
MSH2-202ENST00000406134 WNT5AP41221 380 aa8.41□□□□□ -1.06
MSH2-202ENST00000406134 GPM6AP51674 278 aa8.41□□□□□ -1.06
MSH2-202ENST00000406134 ARF1P84077 181 aaKnown RBP8.41□□□□□ -1.06
MSH2-202ENST00000406134 GUK1Q16774 197 aa8.41□□□□□ -1.06
MSH2-202ENST00000406134 CXorf66Q5JRM2 361 aaPredicted RBP8.41□□□□□ -1.06
MSH2-202ENST00000406134 TCEAL6Q6IPX3 200 aa8.41□□□□□ -1.06
MSH2-202ENST00000406134 TUSC5Q8IXB3 177 aa8.41□□□□□ -1.06
MSH2-202ENST00000406134 MRPL30Q8TCC3 161 aaKnown RBP8.41□□□□□ -1.06
MSH2-202ENST00000406134 TCEAL3Q969E4 200 aa8.41□□□□□ -1.06
MSH2-202ENST00000406134 TECTBQ96PL2 329 aa8.41□□□□□ -1.06
MSH2-202ENST00000406134 CDX2Q99626 313 aaPredicted RBP8.41□□□□□ -1.06
MSH2-202ENST00000406134 RARRES2Q99969 163 aa8.41□□□□□ -1.06
MSH2-202ENST00000406134 FOXJ2Q9P0K8 574 aa8.41□□□□□ -1.06
MSH2-202ENST00000406134 DNAJC13O75165 2243 aa8.41□□□□□ -1.06
MSH2-202ENST00000406134 FAM90A10PA6NDY2 464 aa8.41□□□□□ -1.06
MSH2-202ENST00000406134 FAM90A18PA6NE21 464 aa8.41□□□□□ -1.06
MSH2-202ENST00000406134 FAM90A16PA6NEW6 464 aa8.41□□□□□ -1.06
MSH2-202ENST00000406134 FAM24AA6NFZ4 105 aa8.41□□□□□ -1.06
MSH2-202ENST00000406134 FAM90A20PA6NIJ5 464 aa8.41□□□□□ -1.06
MSH2-202ENST00000406134 FAM90A8PA6NJQ4 464 aa8.41□□□□□ -1.06
MSH2-202ENST00000406134 FAM90A7PA6NKC0 464 aa8.41□□□□□ -1.06
MSH2-202ENST00000406134 FAM90A22PA8MWA6 464 aa8.41□□□□□ -1.06
MSH2-202ENST00000406134 FAM90A12PA8MX19 464 aa8.41□□□□□ -1.06
MSH2-202ENST00000406134 FAM90A5PA8MXJ8 464 aa8.41□□□□□ -1.06
MSH2-202ENST00000406134 FAM90A23PA8MXZ1 464 aa8.41□□□□□ -1.06
MSH2-202ENST00000406134 HLA-HP01893 362 aa8.41□□□□□ -1.06
MSH2-202ENST00000406134 FAM90A15PP0C7V4 464 aa8.41□□□□□ -1.06
MSH2-202ENST00000406134 FAM90A13PP0C7W8 464 aa8.41□□□□□ -1.06
MSH2-202ENST00000406134 FAM90A14PP0C7W9 464 aa8.41□□□□□ -1.06
MSH2-202ENST00000406134 FAM90A24PP0C7X0 464 aa8.41□□□□□ -1.06
MSH2-202ENST00000406134 MALLQ13021 153 aa8.41□□□□□ -1.06
MSH2-202ENST00000406134 MYPOPQ86VE0 399 aaPredicted RBP8.41□□□□□ -1.06
MSH2-202ENST00000406134 LGI3Q8N145 548 aa8.41□□□□□ -1.06
MSH2-202ENST00000406134 GAPTQ8N292 157 aa8.41□□□□□ -1.06
MSH2-202ENST00000406134 OR2M7Q8NG81 312 aa8.41□□□□□ -1.06
MSH2-202ENST00000406134 POM121L2Q96KW2 1035 aa8.41□□□□□ -1.06
MSH2-202ENST00000406134 GUCD1Q96NT3 240 aa8.41□□□□□ -1.06
MSH2-202ENST00000406134 TMED3Q9Y3Q3 217 aa8.41□□□□□ -1.06
MSH2-202ENST00000406134 GTF3C1Q12789 2109 aa8.4□□□□□ -1.06
MSH2-202ENST00000406134 A0A1B0GW64 132 aa8.4□□□□□ -1.06
MSH2-202ENST00000406134 ST8SIA5O15466 376 aa8.4□□□□□ -1.06
MSH2-202ENST00000406134 OR7C1O76099 320 aaPredicted RBP8.4□□□□□ -1.06
MSH2-202ENST00000406134 DAOP14920 347 aa8.4□□□□□ -1.06
MSH2-202ENST00000406134 AGAP20933 346 aa8.4□□□□□ -1.06
MSH2-202ENST00000406134 PPT1P50897 306 aa8.4□□□□□ -1.06
MSH2-202ENST00000406134 SSPNQ14714 243 aa8.4□□□□□ -1.06
MSH2-202ENST00000406134 CEACAM21Q3KPI0 293 aa8.4□□□□□ -1.06
MSH2-202ENST00000406134 ABCA11PQ4W5N1 156 aa8.4□□□□□ -1.06
MSH2-202ENST00000406134 C9orf135Q5VTT2 229 aa8.4□□□□□ -1.06
MSH2-202ENST00000406134 FBXW12Q6X9E4 464 aa8.4□□□□□ -1.06
MSH2-202ENST00000406134 UBALD2Q8IYN6 164 aa8.4□□□□□ -1.06
MSH2-202ENST00000406134 ZDBF2Q9HCK1 2354 aa8.4□□□□□ -1.06
MSH2-202ENST00000406134 TRAV24A0A0B4J272 114 aa8.4□□□□□ -1.06
MSH2-202ENST00000406134 C5orf52A6NGY3 159 aa8.4□□□□□ -1.06
MSH2-202ENST00000406134 ARGFXA6NJG6 315 aa8.4□□□□□ -1.06
MSH2-202ENST00000406134 PITX3O75364 302 aa8.4□□□□□ -1.06
MSH2-202ENST00000406134 TRAPPC6AO75865 159 aa8.4□□□□□ -1.06
MSH2-202ENST00000406134 SERPINA7P05543 415 aa8.4□□□□□ -1.06
MSH2-202ENST00000406134 ACAA1P09110 424 aaPredicted RBP8.4□□□□□ -1.06
MSH2-202ENST00000406134 EIF5AP63241 154 aaKnown RBP8.4□□□□□ -1.06
MSH2-202ENST00000406134 AVPI1Q5T686 147 aa8.4□□□□□ -1.06
MSH2-202ENST00000406134 SAXO1Q8IYX7 474 aa8.4□□□□□ -1.06
MSH2-202ENST00000406134 ZNF488Q96MN9 340 aa8.4□□□□□ -1.06
MSH2-202ENST00000406134 FAM212BQ9NTI7 297 aaPredicted RBP8.4□□□□□ -1.06
MSH2-202ENST00000406134 LYRM2Q9NU23 88 aaPredicted RBP8.4□□□□□ -1.06
MSH2-202ENST00000406134 KCNIP3Q9Y2W7 256 aa8.4□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms