RNA–Protein interactions for RNA: ENST00000401522.7

CHRFAM7A-203, Transcript of CHRNA7 (exons 5-10) and FAM7A (exons A-E) fusion, humanhuman

TSL 1 (best) BASIC

Gene CHRFAM7A, Length 1,913 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRFAM7A-203ENST00000401522 TOMM40LQ969M1 308 aa13.67□□□□□ -0.22
CHRFAM7A-203ENST00000401522 ALKBH3Q96Q83 286 aaPredicted RBP13.67□□□□□ -0.22
CHRFAM7A-203ENST00000401522 TMEM231Q9H6L2 316 aa13.67□□□□□ -0.22
CHRFAM7A-203ENST00000401522 GP6Q9HCN6 339 aa13.67□□□□□ -0.22
CHRFAM7A-203ENST00000401522 NSG2Q9Y328 171 aa13.67□□□□□ -0.22
CHRFAM7A-203ENST00000401522 LSM5Q9Y4Y9 91 aaKnown RBP13.67□□□□□ -0.22
CHRFAM7A-203ENST00000401522 RNASEK-C17orf49H0YIS7 233 aa13.66□□□□□ -0.22
CHRFAM7A-203ENST00000401522 H7C1Q1 480 aa13.66□□□□□ -0.22
CHRFAM7A-203ENST00000401522 GEMIN2O14893 280 aaKnown RBP13.66□□□□□ -0.22
CHRFAM7A-203ENST00000401522 PDCD6O75340 191 aa13.66□□□□□ -0.22
CHRFAM7A-203ENST00000401522 PVALBP20472 110 aaPredicted RBP13.66□□□□□ -0.22
CHRFAM7A-203ENST00000401522 UCP3P55916 312 aa13.66□□□□□ -0.22
CHRFAM7A-203ENST00000401522 TMEM33P57088 247 aa13.66□□□□□ -0.22
CHRFAM7A-203ENST00000401522 MALLQ13021 153 aa13.66□□□□□ -0.22
CHRFAM7A-203ENST00000401522 C1orf185Q5T7R7 199 aa13.66□□□□□ -0.22
CHRFAM7A-203ENST00000401522 FBXL14Q8N1E6 418 aa13.66□□□□□ -0.22
CHRFAM7A-203ENST00000401522 UBAC2Q8NBM4 344 aa13.66□□□□□ -0.22
CHRFAM7A-203ENST00000401522 OR10Z1Q8NGY1 313 aa13.66□□□□□ -0.22
CHRFAM7A-203ENST00000401522 GPR35Q9HC97 309 aa13.66□□□□□ -0.22
CHRFAM7A-203ENST00000401522 GLRX2Q9NS18 164 aa13.66□□□□□ -0.22
CHRFAM7A-203ENST00000401522 ZGRF1Q86YA3 2104 aa13.66□□□□□ -0.22
CHRFAM7A-203ENST00000401522 IGKV1-12A0A0C4DH73 117 aa13.66□□□□□ -0.22
CHRFAM7A-203ENST00000401522 ZNF816-ZNF321PA0A0X1KG74 233 aa13.66□□□□□ -0.22
CHRFAM7A-203ENST00000401522 MBD3L4A6NDZ8 208 aaPredicted RBP13.66□□□□□ -0.22
CHRFAM7A-203ENST00000401522 MBD3L3A6NE82 208 aaPredicted RBP13.66□□□□□ -0.22
CHRFAM7A-203ENST00000401522 MBD3L5A6NJ08 208 aaPredicted RBP13.66□□□□□ -0.22
CHRFAM7A-203ENST00000401522 XRCC2O43543 280 aa13.66□□□□□ -0.22
CHRFAM7A-203ENST00000401522 IGKV1D-12P01611 117 aa13.66□□□□□ -0.22
CHRFAM7A-203ENST00000401522 OR5AC1P0C628 307 aa13.66□□□□□ -0.22
CHRFAM7A-203ENST00000401522 CEACAM16Q2WEN9 425 aa13.66□□□□□ -0.22
CHRFAM7A-203ENST00000401522 PIGYQ3MUY2 71 aa13.66□□□□□ -0.22
CHRFAM7A-203ENST00000401522 SLC22A25Q6T423 547 aa13.66□□□□□ -0.22
CHRFAM7A-203ENST00000401522 LIAT1Q6ZQX7 453 aa13.66□□□□□ -0.22
CHRFAM7A-203ENST00000401522 SEM1Q6ZVN7 128 aa13.66□□□□□ -0.22
CHRFAM7A-203ENST00000401522 MBD3L2Q8NHZ7 208 aaPredicted RBP13.66□□□□□ -0.22
CHRFAM7A-203ENST00000401522 MOB3AQ96BX8 217 aa13.66□□□□□ -0.22
CHRFAM7A-203ENST00000401522 SYT3Q9BQG1 590 aa13.66□□□□□ -0.22
CHRFAM7A-203ENST00000401522 ARV1Q9H2C2 271 aa13.66□□□□□ -0.22
CHRFAM7A-203ENST00000401522 ZNF581Q9P0T4 197 aa13.66□□□□□ -0.22
CHRFAM7A-203ENST00000401522 ST3GAL6Q9Y274 331 aa13.66□□□□□ -0.22
CHRFAM7A-203ENST00000401522 FAM96BQ9Y3D0 163 aa13.66□□□□□ -0.22
CHRFAM7A-203ENST00000401522 CFAP46Q8IYW2 2715 aa13.65□□□□□ -0.22
CHRFAM7A-203ENST00000401522 ZNF724A8MTY0 619 aa13.65□□□□□ -0.22
CHRFAM7A-203ENST00000401522 FBXO24O75426 580 aa13.65□□□□□ -0.22
CHRFAM7A-203ENST00000401522 SCGB1D2O95969 90 aa13.65□□□□□ -0.22
CHRFAM7A-203ENST00000401522 MBPP02686 304 aaPredicted RBP13.65□□□□□ -0.22
CHRFAM7A-203ENST00000401522 CD5P06127 495 aa13.65□□□□□ -0.22
CHRFAM7A-203ENST00000401522 HEXAP06865 529 aa13.65□□□□□ -0.22
CHRFAM7A-203ENST00000401522 PATE4P0C8F1 98 aa13.65□□□□□ -0.22
CHRFAM7A-203ENST00000401522 TIMP3P35625 211 aa13.65□□□□□ -0.22
CHRFAM7A-203ENST00000401522 GLP1RP43220 463 aa13.65□□□□□ -0.22
CHRFAM7A-203ENST00000401522 ZNF92Q03936 586 aa13.65□□□□□ -0.22
CHRFAM7A-203ENST00000401522 GPR157Q5UAW9 335 aa13.65□□□□□ -0.22
CHRFAM7A-203ENST00000401522 PLCXD3Q63HM9 321 aa13.65□□□□□ -0.22
CHRFAM7A-203ENST00000401522 TMEM211Q6ICI0 200 aa13.65□□□□□ -0.22
CHRFAM7A-203ENST00000401522 P4HA3Q7Z4N8 544 aa13.65□□□□□ -0.22
CHRFAM7A-203ENST00000401522 CBLN2Q8IUK8 224 aa13.65□□□□□ -0.22
CHRFAM7A-203ENST00000401522 LGI3Q8N145 548 aa13.65□□□□□ -0.22
CHRFAM7A-203ENST00000401522 ZNF843Q8N446 348 aa13.65□□□□□ -0.22
CHRFAM7A-203ENST00000401522 CCDC71LQ8N9Z2 235 aa13.65□□□□□ -0.22
CHRFAM7A-203ENST00000401522 GMPPAQ96IJ6 420 aaPredicted RBP13.65□□□□□ -0.22
CHRFAM7A-203ENST00000401522 C18orf12Q96KH6 178 aa13.65□□□□□ -0.22
CHRFAM7A-203ENST00000401522 ADAT1Q9BUB4 502 aaKnown RBP13.65□□□□□ -0.22
CHRFAM7A-203ENST00000401522 SLC2A9Q9NRM0 540 aa13.65□□□□□ -0.22
CHRFAM7A-203ENST00000401522 MLXQ9UH92 298 aa13.65□□□□□ -0.22
CHRFAM7A-203ENST00000401522 TINAGQ9UJW2 476 aa13.65□□□□□ -0.22
CHRFAM7A-203ENST00000401522 GPR137BO60478 399 aa13.64□□□□□ -0.23
CHRFAM7A-203ENST00000401522 PRB1P04280 392 aa13.64□□□□□ -0.23
CHRFAM7A-203ENST00000401522 NPBWR1P48145 328 aa13.64□□□□□ -0.23
CHRFAM7A-203ENST00000401522 RBM11P57052 281 aaKnown RBP13.64□□□□□ -0.23
CHRFAM7A-203ENST00000401522 TLE1Q04724 770 aa13.64□□□□□ -0.23
CHRFAM7A-203ENST00000401522 SWI5Q1ZZU3 235 aa13.64□□□□□ -0.23
CHRFAM7A-203ENST00000401522 NRN1LQ496H8 165 aa13.64□□□□□ -0.23
CHRFAM7A-203ENST00000401522 MCEMP1Q8IX19 187 aa13.64□□□□□ -0.23
CHRFAM7A-203ENST00000401522 C9orf106Q8NAJ2 232 aa13.64□□□□□ -0.23
CHRFAM7A-203ENST00000401522 SPSB4Q96A44 273 aa13.64□□□□□ -0.23
CHRFAM7A-203ENST00000401522 TMEM45BQ96B21 275 aa13.64□□□□□ -0.23
CHRFAM7A-203ENST00000401522 MARS2Q96GW9 593 aaKnown RBP13.64□□□□□ -0.23
CHRFAM7A-203ENST00000401522 FAM212BQ9NTI7 297 aaPredicted RBP13.64□□□□□ -0.23
CHRFAM7A-203ENST00000401522 FBXO9Q9UK97 447 aaPredicted RBP13.64□□□□□ -0.23
CHRFAM7A-203ENST00000401522 STARD10Q9Y365 291 aa13.64□□□□□ -0.23
CHRFAM7A-203ENST00000401522 BORCS7-ASMTA0A0B4J1R7 106 aa13.64□□□□□ -0.23
CHRFAM7A-203ENST00000401522 FARS2O95363 451 aaKnown RBP13.64□□□□□ -0.23
CHRFAM7A-203ENST00000401522 SFTA3P0C7M3 94 aa13.64□□□□□ -0.23
CHRFAM7A-203ENST00000401522 DUSP1P28562 367 aa13.64□□□□□ -0.23
CHRFAM7A-203ENST00000401522 FXYD4P59646 89 aa13.64□□□□□ -0.23
CHRFAM7A-203ENST00000401522 GUSBP1Q15486 140 aa13.64□□□□□ -0.23
CHRFAM7A-203ENST00000401522 SP6Q3SY56 376 aa13.64□□□□□ -0.23
CHRFAM7A-203ENST00000401522 SKA3Q8IX90 412 aa13.64□□□□□ -0.23
CHRFAM7A-203ENST00000401522 TUSC5Q8IXB3 177 aa13.64□□□□□ -0.23
CHRFAM7A-203ENST00000401522 LYPD6BQ8NI32 183 aa13.64□□□□□ -0.23
CHRFAM7A-203ENST00000401522 DYRK2Q92630 601 aa13.64□□□□□ -0.23
CHRFAM7A-203ENST00000401522 ATPIF1Q9UII2 106 aa13.64□□□□□ -0.23
CHRFAM7A-203ENST00000401522 SS18L1O75177 396 aaPredicted RBP13.63□□□□□ -0.23
CHRFAM7A-203ENST00000401522 C1QL1O75973 258 aa13.63□□□□□ -0.23
CHRFAM7A-203ENST00000401522 FUT3P21217 361 aa13.63□□□□□ -0.23
CHRFAM7A-203ENST00000401522 CA7P43166 264 aa13.63□□□□□ -0.23
CHRFAM7A-203ENST00000401522 DVL1P1P54792 670 aaPredicted RBP13.63□□□□□ -0.23
CHRFAM7A-203ENST00000401522 CASP6P55212 293 aa13.63□□□□□ -0.23
CHRFAM7A-203ENST00000401522 HERV-K104P61576 105 aa13.63□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 46.2 ms