RNA–Protein interactions for RNA: ENST00000390467.3

TRAV40-201, Transcript of T cell receptor alpha variable 40, humanhuman

APPRIS P1 BASIC

Gene TRAV40, Length 317 nt, Biotype TR V gene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV40-201ENST00000390467 WHAMMP3Q1A5X7 153 aa1.35□□□□□ -2.19
TRAV40-201ENST00000390467 LRRC26Q2I0M4 334 aa1.35□□□□□ -2.19
TRAV40-201ENST00000390467 LRRC75BQ2VPJ9 315 aa1.35□□□□□ -2.19
TRAV40-201ENST00000390467 TTLL9Q3SXZ7 439 aa1.35□□□□□ -2.19
TRAV40-201ENST00000390467 PYCR3Q53H96 274 aa1.35□□□□□ -2.19
TRAV40-201ENST00000390467 ZNF684Q5T5D7 378 aa1.35□□□□□ -2.19
TRAV40-201ENST00000390467 DUX4L9Q6RFH8 374 aaPredicted RBP1.35□□□□□ -2.19
TRAV40-201ENST00000390467 OLIG3Q7RTU3 272 aa1.35□□□□□ -2.19
TRAV40-201ENST00000390467 GLT6D1Q7Z4J2 308 aa1.35□□□□□ -2.19
TRAV40-201ENST00000390467 FAM19A5Q7Z5A7 132 aaPredicted RBP1.35□□□□□ -2.19
TRAV40-201ENST00000390467 CMC1Q7Z7K0 106 aa1.35□□□□□ -2.19
TRAV40-201ENST00000390467 WDR86Q86TI4 376 aa1.35□□□□□ -2.19
TRAV40-201ENST00000390467 LRRC25Q8N386 305 aaPredicted RBP1.35□□□□□ -2.19
TRAV40-201ENST00000390467 ZADH2Q8N4Q0 377 aa1.35□□□□□ -2.19
TRAV40-201ENST00000390467 ZNF676Q8N7Q3 588 aa1.35□□□□□ -2.19
TRAV40-201ENST00000390467 PRELID2Q8N945 189 aa1.35□□□□□ -2.19
TRAV40-201ENST00000390467 ACOT4Q8N9L9 421 aa1.35□□□□□ -2.19
TRAV40-201ENST00000390467 WDR31Q8NA23 367 aa1.35□□□□□ -2.19
TRAV40-201ENST00000390467 SLC26A10Q8NG04 563 aa1.35□□□□□ -2.19
TRAV40-201ENST00000390467 OR2M7Q8NG81 312 aa1.35□□□□□ -2.19
TRAV40-201ENST00000390467 OR8J3Q8NGG0 315 aa1.35□□□□□ -2.19
TRAV40-201ENST00000390467 OR1N2Q8NGR9 330 aa1.35□□□□□ -2.19
TRAV40-201ENST00000390467 OR5B3Q8NH48 314 aa1.35□□□□□ -2.19
TRAV40-201ENST00000390467 OR10A6Q8NH74 314 aa1.35□□□□□ -2.19
TRAV40-201ENST00000390467 COQ8AQ8NI60 647 aa1.35□□□□□ -2.19
TRAV40-201ENST00000390467 STOML3Q8TAV4 291 aa1.35□□□□□ -2.19
TRAV40-201ENST00000390467 PIFOQ8TCI5 191 aa1.35□□□□□ -2.19
TRAV40-201ENST00000390467 SLC7A13Q8TCU3 470 aa1.35□□□□□ -2.19
TRAV40-201ENST00000390467 CD200R1Q8TD46 325 aa1.35□□□□□ -2.19
TRAV40-201ENST00000390467 HAVCR2Q8TDQ0 301 aa1.35□□□□□ -2.19
TRAV40-201ENST00000390467 DOK4Q8TEW6 326 aa1.35□□□□□ -2.19
TRAV40-201ENST00000390467 Q8WTZ3 238 aa1.35□□□□□ -2.19
TRAV40-201ENST00000390467 TMEM234Q8WY98 164 aa1.35□□□□□ -2.19
TRAV40-201ENST00000390467 UFD1Q92890 307 aa1.35□□□□□ -2.19
TRAV40-201ENST00000390467 TAMM41Q96BW9 452 aa1.35□□□□□ -2.19
TRAV40-201ENST00000390467 C12orf43Q96C57 262 aaKnown RBP1.35□□□□□ -2.19
TRAV40-201ENST00000390467 RBMXL1Q96E39 390 aaKnown RBP1.35□□□□□ -2.19
TRAV40-201ENST00000390467 SMIM12Q96EX1 92 aa1.35□□□□□ -2.19
TRAV40-201ENST00000390467 IMP4Q96G21 291 aaKnown RBP1.35□□□□□ -2.19
TRAV40-201ENST00000390467 MED8Q96G25 268 aa1.35□□□□□ -2.19
TRAV40-201ENST00000390467 ZNF681Q96N22 645 aa1.35□□□□□ -2.19
TRAV40-201ENST00000390467 OXGR1Q96P68 337 aa1.35□□□□□ -2.19
TRAV40-201ENST00000390467 PPP1R2P1Q96PQ5 205 aa1.35□□□□□ -2.19
TRAV40-201ENST00000390467 RBP7Q96R05 134 aa1.35□□□□□ -2.19
TRAV40-201ENST00000390467 PFDN5Q99471 154 aa1.35□□□□□ -2.19
TRAV40-201ENST00000390467 C12orf57Q99622 126 aa1.35□□□□□ -2.19
TRAV40-201ENST00000390467 PHB2Q99623 299 aa1.35□□□□□ -2.19
TRAV40-201ENST00000390467 DOK1Q99704 481 aa1.35□□□□□ -2.19
TRAV40-201ENST00000390467 AGMATQ9BSE5 352 aa1.35□□□□□ -2.19
TRAV40-201ENST00000390467 RIOK2Q9BVS4 552 aaKnown RBP1.35□□□□□ -2.19
TRAV40-201ENST00000390467 SLC19A3Q9BZV2 496 aa1.35□□□□□ -2.19
TRAV40-201ENST00000390467 NXF2Q9GZY0 626 aaKnown RBP1.35□□□□□ -2.19
TRAV40-201ENST00000390467 MIXL1Q9H2W2 232 aa1.35□□□□□ -2.19
TRAV40-201ENST00000390467 DSN1Q9H410 356 aa1.35□□□□□ -2.19
TRAV40-201ENST00000390467 MAP1LC3AQ9H492 121 aa1.35□□□□□ -2.19
TRAV40-201ENST00000390467 CWH43Q9H720 699 aa1.35□□□□□ -2.19
TRAV40-201ENST00000390467 ACOT13Q9NPJ3 140 aa1.35□□□□□ -2.19
TRAV40-201ENST00000390467 MCUBQ9NWR8 336 aa1.35□□□□□ -2.19
TRAV40-201ENST00000390467 COA4Q9NYJ1 87 aa1.35□□□□□ -2.19
TRAV40-201ENST00000390467 GLTPQ9NZD2 209 aa1.35□□□□□ -2.19
TRAV40-201ENST00000390467 GSKIPQ9P0R6 139 aa1.35□□□□□ -2.19
TRAV40-201ENST00000390467 VPS29Q9UBQ0 182 aa1.35□□□□□ -2.19
TRAV40-201ENST00000390467 DUX4Q9UBX2 424 aa1.35□□□□□ -2.19
TRAV40-201ENST00000390467 DKKL1Q9UK85 242 aa1.35□□□□□ -2.19
TRAV40-201ENST00000390467 TP53TG1Q9Y2A0 90 aa1.35□□□□□ -2.19
TRAV40-201ENST00000390467 UFC1Q9Y3C8 167 aa1.35□□□□□ -2.19
TRAV40-201ENST00000390467 GOLT1BQ9Y3E0 138 aa1.35□□□□□ -2.19
TRAV40-201ENST00000390467 ASB4Q9Y574 426 aa1.35□□□□□ -2.19
TRAV40-201ENST00000390467 ALG5Q9Y673 324 aa1.35□□□□□ -2.19
TRAV40-201ENST00000390467 ERCC6Q03468 1493 aa1.35□□□□□ -2.19
TRAV40-201ENST00000390467 SNAPC4Q5SXM2 1469 aa1.35□□□□□ -2.19
TRAV40-201ENST00000390467 MROH7Q68CQ1 1323 aa1.35□□□□□ -2.19
TRAV40-201ENST00000390467 CNTNAP1P78357 1384 aa1.34□□□□□ -2.19
TRAV40-201ENST00000390467 RTL9Q8NET4 1388 aa1.34□□□□□ -2.19
TRAV40-201ENST00000390467 CCDC144AA2RUR9 1427 aa1.34□□□□□ -2.19
TRAV40-201ENST00000390467 NPATQ14207 1427 aa1.34□□□□□ -2.19
TRAV40-201ENST00000390467 PPIP5K1Q6PFW1 1433 aa1.34□□□□□ -2.19
TRAV40-201ENST00000390467 COL22A1Q8NFW1 1626 aaPredicted RBP1.34□□□□□ -2.19
TRAV40-201ENST00000390467 A0A087WUJ7 227 aa1.34□□□□□ -2.19
TRAV40-201ENST00000390467 CENPVL3A0A0U1RRI6 287 aa1.34□□□□□ -2.19
TRAV40-201ENST00000390467 IGSF23A1L1A6 192 aa1.34□□□□□ -2.19
TRAV40-201ENST00000390467 PRORSD1PA6NEY8 169 aa1.34□□□□□ -2.19
TRAV40-201ENST00000390467 CLDN24A6NM45 220 aa1.34□□□□□ -2.19
TRAV40-201ENST00000390467 CEACAM18A8MTB9 384 aa1.34□□□□□ -2.19
TRAV40-201ENST00000390467 ANKRD65E5RJM6 399 aa1.34□□□□□ -2.19
TRAV40-201ENST00000390467 PPP5D1E7EU14 171 aa1.34□□□□□ -2.19
TRAV40-201ENST00000390467 LOC110117498-PIK3R3F6TDL0 507 aa1.34□□□□□ -2.19
TRAV40-201ENST00000390467 GPR31O00270 319 aa1.34□□□□□ -2.19
TRAV40-201ENST00000390467 CDC7O00311 574 aa1.34□□□□□ -2.19
TRAV40-201ENST00000390467 ZNF593O00488 134 aaPredicted RBP1.34□□□□□ -2.19
TRAV40-201ENST00000390467 CCL21O00585 134 aa1.34□□□□□ -2.19
TRAV40-201ENST00000390467 TXNDC9O14530 226 aa1.34□□□□□ -2.19
TRAV40-201ENST00000390467 TAAR5O14804 337 aa1.34□□□□□ -2.19
TRAV40-201ENST00000390467 MRPS12O15235 138 aaKnown RBP1.34□□□□□ -2.19
TRAV40-201ENST00000390467 DLEU1O43261 78 aa1.34□□□□□ -2.19
TRAV40-201ENST00000390467 PLIN3O60664 434 aa1.34□□□□□ -2.19
TRAV40-201ENST00000390467 CNMDO75829 334 aa1.34□□□□□ -2.19
TRAV40-201ENST00000390467 SULT1C4O75897 302 aa1.34□□□□□ -2.19
TRAV40-201ENST00000390467 SLC22A5O76082 557 aa1.34□□□□□ -2.19
TRAV40-201ENST00000390467 S1PR2O95136 353 aa1.34□□□□□ -2.19
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms