RNA–Protein interactions for RNA: ENST00000381990.6

GPNMB-202, Transcript of glycoprotein nmb, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene GPNMB, Length 2,763 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPNMB-202ENST00000381990 C10orf128Q5T292 105 aa7.73□□□□□ -1.17
GPNMB-202ENST00000381990 CRIP3Q6Q6R5 217 aa7.73□□□□□ -1.17
GPNMB-202ENST00000381990 SLC22A25Q6T423 547 aa7.73□□□□□ -1.17
GPNMB-202ENST00000381990 DPPA3Q6W0C5 159 aa7.73□□□□□ -1.17
GPNMB-202ENST00000381990 Q6ZSR3 168 aa7.73□□□□□ -1.17
GPNMB-202ENST00000381990 C1QL2Q7Z5L3 287 aa7.73□□□□□ -1.17
GPNMB-202ENST00000381990 STX12Q86Y82 276 aa7.73□□□□□ -1.17
GPNMB-202ENST00000381990 TMEM123Q8N131 208 aa7.73□□□□□ -1.17
GPNMB-202ENST00000381990 ZIC4Q8N9L1 334 aa7.73□□□□□ -1.17
GPNMB-202ENST00000381990 OR2M7Q8NG81 312 aa7.73□□□□□ -1.17
GPNMB-202ENST00000381990 OR10G4Q8NGN3 311 aa7.73□□□□□ -1.17
GPNMB-202ENST00000381990 RNASE11Q8TAA1 199 aaKnown RBP7.73□□□□□ -1.17
GPNMB-202ENST00000381990 Q8WTZ3 238 aa7.73□□□□□ -1.17
GPNMB-202ENST00000381990 HIST1H2BHQ93079 126 aa7.73□□□□□ -1.17
GPNMB-202ENST00000381990 TVP23CQ96ET8 276 aa7.73□□□□□ -1.17
GPNMB-202ENST00000381990 BSCL2Q96G97 398 aaPredicted RBP7.73□□□□□ -1.17
GPNMB-202ENST00000381990 C14orf144Q96I85 54 aa7.73□□□□□ -1.17
GPNMB-202ENST00000381990 ABHD14BQ96IU4 210 aa7.73□□□□□ -1.17
GPNMB-202ENST00000381990 Q96M66 194 aa7.73□□□□□ -1.17
GPNMB-202ENST00000381990 HIST1H2BNQ99877 126 aa7.73□□□□□ -1.17
GPNMB-202ENST00000381990 HIST1H2BMQ99879 126 aa7.73□□□□□ -1.17
GPNMB-202ENST00000381990 FAM86C1Q9NVL1 165 aa7.73□□□□□ -1.17
GPNMB-202ENST00000381990 TMEM242Q9NWH2 141 aa7.73□□□□□ -1.17
GPNMB-202ENST00000381990 MMP24Q9Y5R2 645 aa7.73□□□□□ -1.17
GPNMB-202ENST00000381990 V9GYS6 101 aa7.73□□□□□ -1.17
GPNMB-202ENST00000381990 MED13Q9UHV7 2174 aa7.73□□□□□ -1.17
GPNMB-202ENST00000381990 HSD17B6O14756 317 aa7.72□□□□□ -1.17
GPNMB-202ENST00000381990 GPR37O15354 613 aa7.72□□□□□ -1.17
GPNMB-202ENST00000381990 ST8SIA5O15466 376 aa7.72□□□□□ -1.17
GPNMB-202ENST00000381990 XRCC2O43543 280 aa7.72□□□□□ -1.17
GPNMB-202ENST00000381990 DIRAS3O95661 229 aa7.72□□□□□ -1.17
GPNMB-202ENST00000381990 PTBP3O95758 552 aaKnown RBP7.72□□□□□ -1.17
GPNMB-202ENST00000381990 RD3LP0DJH9 198 aa7.72□□□□□ -1.17
GPNMB-202ENST00000381990 TMEM225BP0DP42 221 aa7.72□□□□□ -1.17
GPNMB-202ENST00000381990 GUCA1AP43080 201 aaPredicted RBP7.72□□□□□ -1.17
GPNMB-202ENST00000381990 GLIPR1P48060 266 aa7.72□□□□□ -1.17
GPNMB-202ENST00000381990 UCP3P55916 312 aa7.72□□□□□ -1.17
GPNMB-202ENST00000381990 EWSR1Q01844 656 aaKnown RBP eCLIP7.72□□□□□ -1.17
GPNMB-202ENST00000381990 FOXL2NBQ6ZUU3 175 aa7.72□□□□□ -1.17
GPNMB-202ENST00000381990 REC114Q7Z4M0 266 aa7.72□□□□□ -1.17
GPNMB-202ENST00000381990 C6orf201Q7Z4U5 140 aa7.72□□□□□ -1.17
GPNMB-202ENST00000381990 LYZL2Q7Z4W2 148 aa7.72□□□□□ -1.17
GPNMB-202ENST00000381990 FBXL14Q8N1E6 418 aa7.72□□□□□ -1.17
GPNMB-202ENST00000381990 OR2C3Q8N628 320 aa7.72□□□□□ -1.17
GPNMB-202ENST00000381990 CCDC71LQ8N9Z2 235 aa7.72□□□□□ -1.17
GPNMB-202ENST00000381990 OR5D18Q8NGL1 313 aa7.72□□□□□ -1.17
GPNMB-202ENST00000381990 OR10D4PQ8NGN7 298 aa7.72□□□□□ -1.17
GPNMB-202ENST00000381990 OR2G3Q8NGZ4 309 aa7.72□□□□□ -1.17
GPNMB-202ENST00000381990 OR2V1Q8NHB1 315 aa7.72□□□□□ -1.17
GPNMB-202ENST00000381990 MSI2Q96DH6 328 aaKnown RBP7.72□□□□□ -1.17
GPNMB-202ENST00000381990 GNPNAT1Q96EK6 184 aaPredicted RBP7.72□□□□□ -1.17
GPNMB-202ENST00000381990 MARS2Q96GW9 593 aaKnown RBP7.72□□□□□ -1.17
GPNMB-202ENST00000381990 PGAM5Q96HS1 289 aa7.72□□□□□ -1.17
GPNMB-202ENST00000381990 SIGLEC12Q96PQ1 595 aa7.72□□□□□ -1.17
GPNMB-202ENST00000381990 RARRES2Q99969 163 aa7.72□□□□□ -1.17
GPNMB-202ENST00000381990 SLC2A9Q9NRM0 540 aa7.72□□□□□ -1.17
GPNMB-202ENST00000381990 WDFY3Q8IZQ1 3526 aa7.72□□□□□ -1.17
GPNMB-202ENST00000381990 OR5H15A6NDH6 313 aa7.72□□□□□ -1.17
GPNMB-202ENST00000381990 OR5H1A6NKK0 313 aa7.72□□□□□ -1.17
GPNMB-202ENST00000381990 ZNF850A8MQ14 1090 aa7.72□□□□□ -1.17
GPNMB-202ENST00000381990 ZNF724A8MTY0 619 aa7.72□□□□□ -1.17
GPNMB-202ENST00000381990 RER1O15258 196 aa7.72□□□□□ -1.17
GPNMB-202ENST00000381990 HBE1P02100 147 aa7.72□□□□□ -1.17
GPNMB-202ENST00000381990 SRP19P09132 144 aaKnown RBP7.72□□□□□ -1.17
GPNMB-202ENST00000381990 FCGR2AP12318 317 aa7.72□□□□□ -1.17
GPNMB-202ENST00000381990 GFRA1P56159 465 aa7.72□□□□□ -1.17
GPNMB-202ENST00000381990 RND3P61587 244 aa7.72□□□□□ -1.17
GPNMB-202ENST00000381990 LSM6P62312 80 aaKnown RBP7.72□□□□□ -1.17
GPNMB-202ENST00000381990 DLK1P80370 383 aa7.72□□□□□ -1.17
GPNMB-202ENST00000381990 NHLH2Q02577 135 aa7.72□□□□□ -1.17
GPNMB-202ENST00000381990 OR1C1Q15619 314 aa7.72□□□□□ -1.17
GPNMB-202ENST00000381990 ZNF506Q5JVG8 444 aa7.72□□□□□ -1.17
GPNMB-202ENST00000381990 CLEC9AQ6UXN8 241 aa7.72□□□□□ -1.17
GPNMB-202ENST00000381990 ZNF429Q86V71 674 aa7.72□□□□□ -1.17
GPNMB-202ENST00000381990 DTX1Q86Y01 620 aa7.72□□□□□ -1.17
GPNMB-202ENST00000381990 HIST3H2BBQ8N257 126 aa7.72□□□□□ -1.17
GPNMB-202ENST00000381990 OR4D5Q8NGN0 318 aa7.72□□□□□ -1.17
GPNMB-202ENST00000381990 S100PBPQ96BU1 408 aa7.72□□□□□ -1.17
GPNMB-202ENST00000381990 ADGRG7Q96K78 797 aa7.72□□□□□ -1.17
GPNMB-202ENST00000381990 SLC25A31Q9H0C2 315 aa7.72□□□□□ -1.17
GPNMB-202ENST00000381990 B4GALT7Q9UBV7 327 aa7.72□□□□□ -1.17
GPNMB-202ENST00000381990 AK3Q9UIJ7 227 aa7.72□□□□□ -1.17
GPNMB-202ENST00000381990 FOXD3Q9UJU5 478 aaPredicted RBP7.72□□□□□ -1.17
GPNMB-202ENST00000381990 ZDHHC8Q9ULC8 765 aa7.72□□□□□ -1.17
GPNMB-202ENST00000381990 NCOA6Q14686 2063 aaPredicted RBP7.72□□□□□ -1.17
GPNMB-202ENST00000381990 SPAARA0A1B0GVQ0 90 aa7.71□□□□□ -1.17
GPNMB-202ENST00000381990 ARGFXA6NJG6 315 aa7.71□□□□□ -1.17
GPNMB-202ENST00000381990 DHHO43323 396 aa7.71□□□□□ -1.17
GPNMB-202ENST00000381990 CXCL13O43927 109 aa7.71□□□□□ -1.17
GPNMB-202ENST00000381990 MSR1P21757 451 aa7.71□□□□□ -1.17
GPNMB-202ENST00000381990 GABRR1P24046 479 aa7.71□□□□□ -1.17
GPNMB-202ENST00000381990 PNRC1Q12796 327 aaPredicted RBP7.71□□□□□ -1.17
GPNMB-202ENST00000381990 PHYHD1Q5SRE7 291 aa7.71□□□□□ -1.17
GPNMB-202ENST00000381990 SPSB3Q6PJ21 355 aa7.71□□□□□ -1.17
GPNMB-202ENST00000381990 LINC00696Q6ZRV3 163 aa7.71□□□□□ -1.17
GPNMB-202ENST00000381990 OR5R1Q8NH85 324 aa7.71□□□□□ -1.17
GPNMB-202ENST00000381990 TOMM40LQ969M1 308 aa7.71□□□□□ -1.17
GPNMB-202ENST00000381990 SPIN2AQ99865 258 aa7.71□□□□□ -1.17
GPNMB-202ENST00000381990 SPIN2BQ9BPZ2 258 aa7.71□□□□□ -1.17
GPNMB-202ENST00000381990 ZNF703Q9H7S9 590 aaPredicted RBP7.71□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms