RNA–Protein interactions for RNA: ENST00000381150.5

SDC1-202, Transcript of syndecan 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SDC1, Length 3,291 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDC1-202ENST00000381150 SERPINE3A8MV23 424 aa12.02□□□□□ -0.49
SDC1-202ENST00000381150 ADAM20O43506 726 aa12.02□□□□□ -0.49
SDC1-202ENST00000381150 COX5BP10606 129 aa12.02□□□□□ -0.49
SDC1-202ENST00000381150 TMEM187Q14656 261 aa12.02□□□□□ -0.49
SDC1-202ENST00000381150 DEGS2Q6QHC5 323 aa12.02□□□□□ -0.49
SDC1-202ENST00000381150 LIAT1Q6ZQX7 453 aa12.02□□□□□ -0.49
SDC1-202ENST00000381150 FBXL14Q8N1E6 418 aa12.02□□□□□ -0.49
SDC1-202ENST00000381150 TMEM234Q8WY98 164 aa12.02□□□□□ -0.49
SDC1-202ENST00000381150 HIST1H2AAQ96QV6 131 aa12.02□□□□□ -0.49
SDC1-202ENST00000381150 TP53RKQ96S44 253 aa12.02□□□□□ -0.49
SDC1-202ENST00000381150 DCAF16Q9NXF7 216 aa12.02□□□□□ -0.49
SDC1-202ENST00000381150 ZNF407Q9C0G0 2248 aa12.02□□□□□ -0.49
SDC1-202ENST00000381150 ARHGAP21Q5T5U3 1957 aa12.02□□□□□ -0.49
SDC1-202ENST00000381150 A0A0U1RQK1 487 aa12.01□□□□□ -0.49
SDC1-202ENST00000381150 A0A1W2PQM1 296 aa12.01□□□□□ -0.49
SDC1-202ENST00000381150 OR7C1O76099 320 aaPredicted RBP12.01□□□□□ -0.49
SDC1-202ENST00000381150 AMBPP02760 352 aa12.01□□□□□ -0.49
SDC1-202ENST00000381150 OR4A8P0C604 315 aa12.01□□□□□ -0.49
SDC1-202ENST00000381150 PCP4P48539 62 aa12.01□□□□□ -0.49
SDC1-202ENST00000381150 H3F3AP84243 136 aa12.01□□□□□ -0.49
SDC1-202ENST00000381150 COL10A1Q03692 680 aa12.01□□□□□ -0.49
SDC1-202ENST00000381150 TLE4Q04727 773 aa12.01□□□□□ -0.49
SDC1-202ENST00000381150 RTP5Q14D33 572 aa12.01□□□□□ -0.49
SDC1-202ENST00000381150 FAM189A2Q15884 450 aa12.01□□□□□ -0.49
SDC1-202ENST00000381150 PIGYQ3MUY2 71 aa12.01□□□□□ -0.49
SDC1-202ENST00000381150 SPSB3Q6PJ21 355 aa12.01□□□□□ -0.49
SDC1-202ENST00000381150 MRPL37Q9BZE1 423 aaKnown RBP12.01□□□□□ -0.49
SDC1-202ENST00000381150 KIAA1456Q9P272 454 aa12.01□□□□□ -0.49
SDC1-202ENST00000381150 TMEM265A0A087WTH1 108 aa12.01□□□□□ -0.49
SDC1-202ENST00000381150 A8MWP6 167 aa12.01□□□□□ -0.49
SDC1-202ENST00000381150 DFFBO76075 338 aa12.01□□□□□ -0.49
SDC1-202ENST00000381150 CXCL12P48061 93 aa12.01□□□□□ -0.49
SDC1-202ENST00000381150 RABEPKQ7Z6M1 372 aa12.01□□□□□ -0.49
SDC1-202ENST00000381150 MYPOPQ86VE0 399 aaPredicted RBP12.01□□□□□ -0.49
SDC1-202ENST00000381150 OR4X1Q8NH49 305 aa12.01□□□□□ -0.49
SDC1-202ENST00000381150 PLEK2Q9NYT0 353 aa12.01□□□□□ -0.49
SDC1-202ENST00000381150 FUT9Q9Y231 359 aa12.01□□□□□ -0.49
SDC1-202ENST00000381150 SVILO95425 2214 aa12.01□□□□□ -0.49
SDC1-202ENST00000381150 COL6A3P12111 3177 aa12.01□□□□□ -0.49
SDC1-202ENST00000381150 ZNF17P17021 662 aa12.01□□□□□ -0.49
SDC1-202ENST00000381150 ZNF43P17038 809 aa12.01□□□□□ -0.49
SDC1-202ENST00000381150 NUTF2P61970 127 aaKnown RBP12.01□□□□□ -0.49
SDC1-202ENST00000381150 TNFRSF9Q07011 255 aa12.01□□□□□ -0.49
SDC1-202ENST00000381150 MYBPHQ13203 477 aa12.01□□□□□ -0.49
SDC1-202ENST00000381150 DOK3Q7L591 496 aa12.01□□□□□ -0.49
SDC1-202ENST00000381150 TMEM252Q8N6L7 170 aa12.01□□□□□ -0.49
SDC1-202ENST00000381150 BOD1Q96IK1 185 aa12.01□□□□□ -0.49
SDC1-202ENST00000381150 PITPNC1Q9UKF7 332 aa12.01□□□□□ -0.49
SDC1-202ENST00000381150 TMED3Q9Y3Q3 217 aa12.01□□□□□ -0.49
SDC1-202ENST00000381150 ADAMTS9Q9P2N4 1935 aa12□□□□□ -0.49
SDC1-202ENST00000381150 ASPMQ8IZT6 3477 aa12□□□□□ -0.49
SDC1-202ENST00000381150 PPP5D1E7EU14 171 aa12□□□□□ -0.49
SDC1-202ENST00000381150 IGHG1P01857 330 aa12□□□□□ -0.49
SDC1-202ENST00000381150 ZNF787Q6DD87 383 aa12□□□□□ -0.49
SDC1-202ENST00000381150 HLA-CQ95604 372 aa12□□□□□ -0.49
SDC1-202ENST00000381150 PLK3Q9H4B4 646 aa12□□□□□ -0.49
SDC1-202ENST00000381150 DMDP11532 3685 aa12□□□□□ -0.49
SDC1-202ENST00000381150 IGHV3-15A0A0B4J1V0 119 aa12□□□□□ -0.49
SDC1-202ENST00000381150 ANKUB1A6NFN9 424 aa12□□□□□ -0.49
SDC1-202ENST00000381150 ZP4Q12836 540 aa12□□□□□ -0.49
SDC1-202ENST00000381150 GUSBP11Q6P575 273 aa12□□□□□ -0.49
SDC1-202ENST00000381150 NDUFAF3Q9BU61 184 aa12□□□□□ -0.49
SDC1-202ENST00000381150 PI4KAP42356 2102 aa12□□□□□ -0.49
SDC1-202ENST00000381150 ETV2O00321 342 aaPredicted RBP11.99□□□□□ -0.49
SDC1-202ENST00000381150 CHST1O43916 411 aa11.99□□□□□ -0.49
SDC1-202ENST00000381150 EFNA2O43921 213 aa11.99□□□□□ -0.49
SDC1-202ENST00000381150 IFNA5P01569 189 aa11.99□□□□□ -0.49
SDC1-202ENST00000381150 ZNF16P17020 682 aaPredicted RBP11.99□□□□□ -0.49
SDC1-202ENST00000381150 IL13RA2Q14627 380 aa11.99□□□□□ -0.49
SDC1-202ENST00000381150 OR10A7Q8NGE5 316 aa11.99□□□□□ -0.49
SDC1-202ENST00000381150 OR5B12Q96R08 314 aa11.99□□□□□ -0.49
SDC1-202ENST00000381150 SMIM7Q9BQ49 75 aa11.99□□□□□ -0.49
SDC1-202ENST00000381150 C2orf88Q9BSF0 95 aa11.99□□□□□ -0.49
SDC1-202ENST00000381150 CALHM2Q9HA72 323 aa11.99□□□□□ -0.49
SDC1-202ENST00000381150 GLRX2Q9NS18 164 aa11.99□□□□□ -0.49
SDC1-202ENST00000381150 TNRC6BQ9UPQ9 1833 aaKnown RBP11.99□□□□□ -0.49
SDC1-202ENST00000381150 IAPPP10997 89 aa11.99□□□□□ -0.49
SDC1-202ENST00000381150 AADACP22760 399 aa11.99□□□□□ -0.49
SDC1-202ENST00000381150 RPS16P62249 146 aaKnown RBP11.99□□□□□ -0.49
SDC1-202ENST00000381150 PAX5Q02548 391 aa11.99□□□□□ -0.49
SDC1-202ENST00000381150 C17orf67Q0P5P2 114 aa11.99□□□□□ -0.49
SDC1-202ENST00000381150 RTL6Q6ICC9 239 aa11.99□□□□□ -0.49
SDC1-202ENST00000381150 KDF1Q8NAX2 398 aaPredicted RBP11.99□□□□□ -0.49
SDC1-202ENST00000381150 SCGB1C1Q8TD33 95 aa11.99□□□□□ -0.49
SDC1-202ENST00000381150 OR6C1Q96RD1 312 aa11.99□□□□□ -0.49
SDC1-202ENST00000381150 CEACAM18A8MTB9 384 aa11.99□□□□□ -0.49
SDC1-202ENST00000381150 CLDN17P56750 224 aa11.99□□□□□ -0.49
SDC1-202ENST00000381150 ARL6IP1Q15041 203 aa11.99□□□□□ -0.49
SDC1-202ENST00000381150 FAM69BQ5VUD6 431 aa11.99□□□□□ -0.49
SDC1-202ENST00000381150 OR51H1Q8NH63 302 aa11.99□□□□□ -0.49
SDC1-202ENST00000381150 ST8SIA1Q92185 356 aa11.99□□□□□ -0.49
SDC1-202ENST00000381150 DDIT4LQ96D03 193 aa11.99□□□□□ -0.49
SDC1-202ENST00000381150 PCGF1Q9BSM1 259 aa11.99□□□□□ -0.49
SDC1-202ENST00000381150 DKKL1Q9UK85 242 aa11.99□□□□□ -0.49
SDC1-202ENST00000381150 EPHA8P29322 1005 aaPredicted RBP11.98□□□□□ -0.49
SDC1-202ENST00000381150 WNT5AP41221 380 aa11.98□□□□□ -0.49
SDC1-202ENST00000381150 CCL7P80098 99 aa11.98□□□□□ -0.49
SDC1-202ENST00000381150 FOXO1Q12778 655 aa11.98□□□□□ -0.49
SDC1-202ENST00000381150 JOSD1Q15040 202 aaPredicted RBP11.98□□□□□ -0.49
SDC1-202ENST00000381150 PRSS8Q16651 343 aa11.98□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 11.2 ms