RNA–Protein interactions for RNA: ENST00000377298.8

CLSTN1-202, Transcript of calsyntenin 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CLSTN1, Length 5,221 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN1-202ENST00000377298 LRFN3Q9BTN0 628 aa15.62■□□□□ 0.09
CLSTN1-202ENST00000377298 LSM2Q9Y333 95 aaKnown RBP15.62■□□□□ 0.09
CLSTN1-202ENST00000377298 HNF1AP20823 631 aa15.62■□□□□ 0.09
CLSTN1-202ENST00000377298 ETV3LQ6ZN32 361 aa15.62■□□□□ 0.09
CLSTN1-202ENST00000377298 OPN3Q9H1Y3 402 aaPredicted RBP15.62■□□□□ 0.09
CLSTN1-202ENST00000377298 NPTNQ9Y639 398 aa15.62■□□□□ 0.09
CLSTN1-202ENST00000377298 A0A1W2PRD5 423 aa15.62■□□□□ 0.09
CLSTN1-202ENST00000377298 A0A1W2PRF3 423 aa15.62■□□□□ 0.09
CLSTN1-202ENST00000377298 A0A1W2PRM7 423 aa15.62■□□□□ 0.09
CLSTN1-202ENST00000377298 ZNF785A8K8V0 405 aa15.62■□□□□ 0.09
CLSTN1-202ENST00000377298 KIR3DL2P43630 455 aa15.62■□□□□ 0.09
CLSTN1-202ENST00000377298 UCP2P55851 309 aa15.62■□□□□ 0.09
CLSTN1-202ENST00000377298 TMEM65Q6PI78 240 aa15.62■□□□□ 0.09
CLSTN1-202ENST00000377298 CYB5R1Q9UHQ9 305 aa15.62■□□□□ 0.09
CLSTN1-202ENST00000377298 SPINK2P20155 84 aa15.61■□□□□ 0.09
CLSTN1-202ENST00000377298 CTSSP25774 331 aa15.61■□□□□ 0.09
CLSTN1-202ENST00000377298 ROM1Q03395 351 aa15.61■□□□□ 0.09
CLSTN1-202ENST00000377298 ZNF90Q03938 601 aa15.61■□□□□ 0.09
CLSTN1-202ENST00000377298 OR2C3Q8N628 320 aa15.61■□□□□ 0.09
CLSTN1-202ENST00000377298 COMMD1Q8N668 190 aa15.61■□□□□ 0.09
CLSTN1-202ENST00000377298 TMEM231Q9H6L2 316 aa15.61■□□□□ 0.09
CLSTN1-202ENST00000377298 TREM2Q9NZC2 230 aa15.61■□□□□ 0.09
CLSTN1-202ENST00000377298 FOXJ2Q9P0K8 574 aa15.61■□□□□ 0.09
CLSTN1-202ENST00000377298 PCDHGA9Q9Y5G4 932 aaKnown RBP15.61■□□□□ 0.09
CLSTN1-202ENST00000377298 ASXL3Q9C0F0 2248 aa15.61■□□□□ 0.09
CLSTN1-202ENST00000377298 NANOS3P60323 173 aaKnown RBP15.61■□□□□ 0.09
CLSTN1-202ENST00000377298 HLA-DRB3P79483 266 aa15.61■□□□□ 0.09
CLSTN1-202ENST00000377298 PRSS54Q6PEW0 395 aa15.61■□□□□ 0.09
CLSTN1-202ENST00000377298 LOC101059948A0A1B0GTJ6 334 aa15.61■□□□□ 0.09
CLSTN1-202ENST00000377298 OR2C1O95371 312 aa15.61■□□□□ 0.09
CLSTN1-202ENST00000377298 MPC2O95563 127 aa15.61■□□□□ 0.09
CLSTN1-202ENST00000377298 PAX6P26367 422 aa15.61■□□□□ 0.09
CLSTN1-202ENST00000377298 CNN1P51911 297 aaKnown RBP15.61■□□□□ 0.09
CLSTN1-202ENST00000377298 TEX30Q5JUR7 227 aa15.61■□□□□ 0.09
CLSTN1-202ENST00000377298 ACSM6Q6P461 480 aa15.61■□□□□ 0.09
CLSTN1-202ENST00000377298 TBC1D26Q86UD7 250 aa15.61■□□□□ 0.09
CLSTN1-202ENST00000377298 OR5B3Q8NH48 314 aa15.61■□□□□ 0.09
CLSTN1-202ENST00000377298 C1RLQ9NZP8 487 aa15.61■□□□□ 0.09
CLSTN1-202ENST00000377298 PPYP01298 95 aa15.61■□□□□ 0.09
CLSTN1-202ENST00000377298 BATFQ16520 125 aa15.61■□□□□ 0.09
CLSTN1-202ENST00000377298 SKA3Q8IX90 412 aa15.61■□□□□ 0.09
CLSTN1-202ENST00000377298 RPL36A-HNRNPH2H7BZ11 118 aa15.61■□□□□ 0.09
CLSTN1-202ENST00000377298 IGHV3-13P01766 116 aa15.61■□□□□ 0.09
CLSTN1-202ENST00000377298 IGHV3-7P01780 117 aa15.61■□□□□ 0.09
CLSTN1-202ENST00000377298 TMEM267Q0VDI3 215 aaPredicted RBP15.61■□□□□ 0.09
CLSTN1-202ENST00000377298 ATP6V1FQ16864 119 aa15.61■□□□□ 0.09
CLSTN1-202ENST00000377298 TMEM147Q9BVK8 224 aa15.61■□□□□ 0.09
CLSTN1-202ENST00000377298 CLN8Q9UBY8 286 aa15.61■□□□□ 0.09
CLSTN1-202ENST00000377298 OR4A8P0C604 315 aa15.6■□□□□ 0.09
CLSTN1-202ENST00000377298 OR5C1Q8NGR4 320 aa15.6■□□□□ 0.09
CLSTN1-202ENST00000377298 ZNF236Q9UL36 1845 aa15.6■□□□□ 0.09
CLSTN1-202ENST00000377298 FSTP19883 344 aa15.6■□□□□ 0.09
CLSTN1-202ENST00000377298 CEACAM21Q3KPI0 293 aa15.6■□□□□ 0.09
CLSTN1-202ENST00000377298 PIGYQ3MUY2 71 aa15.6■□□□□ 0.09
CLSTN1-202ENST00000377298 ZBTB34Q8NCN2 500 aa15.6■□□□□ 0.09
CLSTN1-202ENST00000377298 OR4A4PQ8NGN8 299 aa15.6■□□□□ 0.09
CLSTN1-202ENST00000377298 MIXL1Q9H2W2 232 aa15.6■□□□□ 0.09
CLSTN1-202ENST00000377298 PPIAL4EA0A075B759 164 aa15.6■□□□□ 0.09
CLSTN1-202ENST00000377298 IGLV1-36A0A0B4J1U3 117 aa15.6■□□□□ 0.09
CLSTN1-202ENST00000377298 PPIAL4DF5H284 164 aa15.6■□□□□ 0.09
CLSTN1-202ENST00000377298 MS4A18H0YCH9 400 aa15.6■□□□□ 0.09
CLSTN1-202ENST00000377298 INHBBP09529 407 aa15.6■□□□□ 0.09
CLSTN1-202ENST00000377298 PPIAL4FP0DN26 164 aa15.6■□□□□ 0.09
CLSTN1-202ENST00000377298 MS4A18Q3C1V0 323 aa15.6■□□□□ 0.09
CLSTN1-202ENST00000377298 MITD1Q8WV92 249 aa15.6■□□□□ 0.09
CLSTN1-202ENST00000377298 PPIAL4AQ9Y536 164 aa15.6■□□□□ 0.09
CLSTN1-202ENST00000377298 F2RL2O00254 374 aa15.6■□□□□ 0.09
CLSTN1-202ENST00000377298 LIAT1Q6ZQX7 453 aa15.6■□□□□ 0.09
CLSTN1-202ENST00000377298 CLRN3Q8NCR9 226 aa15.6■□□□□ 0.09
CLSTN1-202ENST00000377298 ZNF519Q8TB69 540 aa15.6■□□□□ 0.09
CLSTN1-202ENST00000377298 R3HDM4Q96D70 268 aa15.6■□□□□ 0.09
CLSTN1-202ENST00000377298 PPP1R2P9O14990 202 aa15.59■□□□□ 0.09
CLSTN1-202ENST00000377298 ZNF205O95201 554 aa15.59■□□□□ 0.09
CLSTN1-202ENST00000377298 KIAA0141Q14154 515 aaPredicted RBP15.59■□□□□ 0.09
CLSTN1-202ENST00000377298 OR51I2Q9H344 312 aa15.59■□□□□ 0.09
CLSTN1-202ENST00000377298 AAMDCQ9H7C9 122 aa15.59■□□□□ 0.09
CLSTN1-202ENST00000377298 RNF122Q9H9V4 155 aa15.59■□□□□ 0.09
CLSTN1-202ENST00000377298 CHEK1O14757 476 aa15.59■□□□□ 0.09
CLSTN1-202ENST00000377298 CEACAM1P13688 526 aa15.59■□□□□ 0.09
CLSTN1-202ENST00000377298 VDAC1P21796 283 aa15.59■□□□□ 0.09
CLSTN1-202ENST00000377298 RPL7L1Q6DKI1 246 aaKnown RBP15.59■□□□□ 0.09
CLSTN1-202ENST00000377298 TMEM88Q6PEY1 159 aa15.59■□□□□ 0.09
CLSTN1-202ENST00000377298 TVP23CQ96ET8 276 aa15.59■□□□□ 0.09
CLSTN1-202ENST00000377298 EFEMP2O95967 443 aa15.59■□□□□ 0.09
CLSTN1-202ENST00000377298 CPN1P15169 458 aa15.59■□□□□ 0.09
CLSTN1-202ENST00000377298 OR13D1Q8NGV5 346 aa15.59■□□□□ 0.09
CLSTN1-202ENST00000377298 ICE1Q9Y2F5 2266 aa15.59■□□□□ 0.09
CLSTN1-202ENST00000377298 TRPM7Q96QT4 1865 aa15.59■□□□□ 0.09
CLSTN1-202ENST00000377298 OR5H1A6NKK0 313 aa15.59■□□□□ 0.09
CLSTN1-202ENST00000377298 SCGB1D1O95968 90 aa15.59■□□□□ 0.09
CLSTN1-202ENST00000377298 HOXA6P31267 233 aa15.59■□□□□ 0.09
CLSTN1-202ENST00000377298 TGIF2LYQ8IUE0 185 aa15.59■□□□□ 0.09
CLSTN1-202ENST00000377298 TGIF2LXQ8IUE1 241 aa15.59■□□□□ 0.09
CLSTN1-202ENST00000377298 OR5M8Q8NGP6 311 aa15.59■□□□□ 0.09
CLSTN1-202ENST00000377298 FFAR4Q5NUL3 377 aa15.58■□□□□ 0.09
CLSTN1-202ENST00000377298 ZNF574Q6ZN55 896 aaPredicted RBP15.58■□□□□ 0.09
CLSTN1-202ENST00000377298 OR2W1Q9Y3N9 320 aa15.58■□□□□ 0.09
CLSTN1-202ENST00000377298 RBM11P57052 281 aaKnown RBP15.58■□□□□ 0.08
CLSTN1-202ENST00000377298 WFDC6Q9BQY6 131 aa15.58■□□□□ 0.08
CLSTN1-202ENST00000377298 WIPI2Q9Y4P8 454 aa15.58■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 72 ms