RNA–Protein interactions for RNA: ENST00000374199.8

PRPF4-202, Transcript of pre-mRNA processing factor 4, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene PRPF4, Length 3,212 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF4-202ENST00000374199 WDR82Q6UXN9 313 aa10.62□□□□□ -0.71
PRPF4-202ENST00000374199 OR10Z1Q8NGY1 313 aa10.62□□□□□ -0.71
PRPF4-202ENST00000374199 LILRB1Q8NHL6 650 aaPredicted RBP10.62□□□□□ -0.71
PRPF4-202ENST00000374199 STOML3Q8TAV4 291 aa10.62□□□□□ -0.71
PRPF4-202ENST00000374199 TMEM56Q96MV1 263 aa10.62□□□□□ -0.71
PRPF4-202ENST00000374199 C11orf1Q9H5F2 150 aa10.62□□□□□ -0.71
PRPF4-202ENST00000374199 SLC2A9Q9NRM0 540 aa10.62□□□□□ -0.71
PRPF4-202ENST00000374199 C14orf166Q9Y224 244 aaKnown RBP10.62□□□□□ -0.71
PRPF4-202ENST00000374199 TMEM56-RWDD3S4R434 201 aa10.62□□□□□ -0.71
PRPF4-202ENST00000374199 A0A0G2JNJ9 132 aa10.62□□□□□ -0.71
PRPF4-202ENST00000374199 H7C1Q1 480 aa10.62□□□□□ -0.71
PRPF4-202ENST00000374199 IFNL4K9M1U5 179 aa10.62□□□□□ -0.71
PRPF4-202ENST00000374199 IFNA7P01567 189 aa10.62□□□□□ -0.71
PRPF4-202ENST00000374199 ZNF728P0DKX0 622 aa10.62□□□□□ -0.71
PRPF4-202ENST00000374199 AADACP22760 399 aa10.62□□□□□ -0.71
PRPF4-202ENST00000374199 FCGR2CP31995 323 aa10.62□□□□□ -0.71
PRPF4-202ENST00000374199 MSMO1Q15800 293 aa10.62□□□□□ -0.71
PRPF4-202ENST00000374199 IGSF11Q5DX21 431 aa10.62□□□□□ -0.71
PRPF4-202ENST00000374199 LIN54Q6MZP7 749 aa10.62□□□□□ -0.71
PRPF4-202ENST00000374199 OR10C1Q96KK4 312 aa10.62□□□□□ -0.71
PRPF4-202ENST00000374199 C2orf50Q96LR7 162 aa10.62□□□□□ -0.71
PRPF4-202ENST00000374199 DMRTA2Q96SC8 542 aa10.62□□□□□ -0.71
PRPF4-202ENST00000374199 ZNF442Q9H7R0 627 aa10.62□□□□□ -0.71
PRPF4-202ENST00000374199 C1orf123Q9NWV4 160 aa10.62□□□□□ -0.71
PRPF4-202ENST00000374199 Q9UFV3 132 aa10.62□□□□□ -0.71
PRPF4-202ENST00000374199 L7N2F9 121 aa10.61□□□□□ -0.71
PRPF4-202ENST00000374199 CCSO14618 274 aa10.61□□□□□ -0.71
PRPF4-202ENST00000374199 DEGS1O15121 323 aa10.61□□□□□ -0.71
PRPF4-202ENST00000374199 GFRA3O60609 400 aa10.61□□□□□ -0.71
PRPF4-202ENST00000374199 OR2H2O95918 312 aa10.61□□□□□ -0.71
PRPF4-202ENST00000374199 LHBP01229 141 aa10.61□□□□□ -0.71
PRPF4-202ENST00000374199 PSMB6P28072 239 aa10.61□□□□□ -0.71
PRPF4-202ENST00000374199 GLRXP35754 106 aa10.61□□□□□ -0.71
PRPF4-202ENST00000374199 UCNP55089 124 aa10.61□□□□□ -0.71
PRPF4-202ENST00000374199 HLA-DRB3P79483 266 aa10.61□□□□□ -0.71
PRPF4-202ENST00000374199 PDCD1Q15116 288 aa10.61□□□□□ -0.71
PRPF4-202ENST00000374199 OR8G1Q15617 311 aa10.61□□□□□ -0.71
PRPF4-202ENST00000374199 AQP10Q96PS8 301 aa10.61□□□□□ -0.71
PRPF4-202ENST00000374199 TEX13DA0A0J9YY54 714 aaPredicted RBP10.61□□□□□ -0.71
PRPF4-202ENST00000374199 KNG1P01042 644 aa10.61□□□□□ -0.71
PRPF4-202ENST00000374199 EIF4EBP1Q13541 118 aaPredicted RBP10.61□□□□□ -0.71
PRPF4-202ENST00000374199 ZNF718Q3SXZ3 478 aa10.61□□□□□ -0.71
PRPF4-202ENST00000374199 GSG1LQ6UXU4 331 aa10.61□□□□□ -0.71
PRPF4-202ENST00000374199 ACOT7LQ6ZUV0 252 aa10.61□□□□□ -0.71
PRPF4-202ENST00000374199 KDF1Q8NAX2 398 aaPredicted RBP10.61□□□□□ -0.71
PRPF4-202ENST00000374199 TMEM171Q8WVE6 324 aa10.61□□□□□ -0.71
PRPF4-202ENST00000374199 CCDC120Q96HB5 630 aa10.61□□□□□ -0.71
PRPF4-202ENST00000374199 VRK1Q99986 396 aaPredicted RBP10.61□□□□□ -0.71
PRPF4-202ENST00000374199 TANC2Q9HCD6 1990 aa10.61□□□□□ -0.71
PRPF4-202ENST00000374199 CEP250Q9BV73 2442 aa10.61□□□□□ -0.71
PRPF4-202ENST00000374199 MPTX1A8MV57 137 aa10.6□□□□□ -0.71
PRPF4-202ENST00000374199 ADH4P08319 380 aa10.6□□□□□ -0.71
PRPF4-202ENST00000374199 SCTP09683 121 aa10.6□□□□□ -0.71
PRPF4-202ENST00000374199 PI3P19957 117 aa10.6□□□□□ -0.71
PRPF4-202ENST00000374199 TMPRSS3P57727 454 aa10.6□□□□□ -0.71
PRPF4-202ENST00000374199 PRSS54Q6PEW0 395 aa10.6□□□□□ -0.71
PRPF4-202ENST00000374199 ACP7Q6ZNF0 438 aa10.6□□□□□ -0.71
PRPF4-202ENST00000374199 C22orf34Q6ZV56 151 aa10.6□□□□□ -0.71
PRPF4-202ENST00000374199 BVESQ8NE79 360 aa10.6□□□□□ -0.71
PRPF4-202ENST00000374199 PLPPR1Q8TBJ4 325 aa10.6□□□□□ -0.71
PRPF4-202ENST00000374199 GLYATL2Q8WU03 294 aa10.6□□□□□ -0.71
PRPF4-202ENST00000374199 NCOR1P1Q9H4R4 102 aa10.6□□□□□ -0.71
PRPF4-202ENST00000374199 DNAJB11Q9UBS4 358 aa10.6□□□□□ -0.71
PRPF4-202ENST00000374199 ANKRD11Q6UB99 2663 aaPredicted RBP10.6□□□□□ -0.71
PRPF4-202ENST00000374199 ARPC5O15511 151 aa10.6□□□□□ -0.71
PRPF4-202ENST00000374199 BCL2L11O43521 198 aa10.6□□□□□ -0.71
PRPF4-202ENST00000374199 VAMP1P23763 118 aa10.6□□□□□ -0.71
PRPF4-202ENST00000374199 PIGPP57054 158 aa10.6□□□□□ -0.71
PRPF4-202ENST00000374199 IGFBP7Q16270 282 aa10.6□□□□□ -0.71
PRPF4-202ENST00000374199 SLC51BQ86UW2 128 aa10.6□□□□□ -0.71
PRPF4-202ENST00000374199 RELL2Q8NC24 303 aaPredicted RBP10.6□□□□□ -0.71
PRPF4-202ENST00000374199 FAM222BQ8WU58 562 aa10.6□□□□□ -0.71
PRPF4-202ENST00000374199 FAM216AQ8WUB2 273 aa10.6□□□□□ -0.71
PRPF4-202ENST00000374199 PHYHIPLQ96FC7 376 aa10.6□□□□□ -0.71
PRPF4-202ENST00000374199 UBQLN2Q9UHD9 624 aa10.6□□□□□ -0.71
PRPF4-202ENST00000374199 DSPP15924 2871 aaKnown RBP10.6□□□□□ -0.71
PRPF4-202ENST00000374199 DUXBA0A1W2PPF3 345 aa10.6□□□□□ -0.71
PRPF4-202ENST00000374199 LIAT1Q6ZQX7 453 aa10.6□□□□□ -0.71
PRPF4-202ENST00000374199 ZNF546Q86UE3 836 aa10.6□□□□□ -0.71
PRPF4-202ENST00000374199 SGPP2Q8IWX5 399 aa10.6□□□□□ -0.71
PRPF4-202ENST00000374199 OR51B6Q9H340 312 aa10.6□□□□□ -0.71
PRPF4-202ENST00000374199 FAM221AA4D161 298 aa10.59□□□□□ -0.71
PRPF4-202ENST00000374199 ADAP1O75689 374 aa10.59□□□□□ -0.71
PRPF4-202ENST00000374199 SLC35E4Q6ICL7 350 aa10.59□□□□□ -0.71
PRPF4-202ENST00000374199 C11orf88Q6PI97 169 aa10.59□□□□□ -0.71
PRPF4-202ENST00000374199 IL22RA2Q969J5 263 aa10.59□□□□□ -0.71
PRPF4-202ENST00000374199 MFFQ9GZY8 342 aa10.59□□□□□ -0.71
PRPF4-202ENST00000374199 CHMP1AQ9HD42 196 aaPredicted RBP10.59□□□□□ -0.71
PRPF4-202ENST00000374199 MAB21L2Q9Y586 359 aa10.59□□□□□ -0.71
PRPF4-202ENST00000374199 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP10.59□□□□□ -0.71
PRPF4-202ENST00000374199 LEUTXA8MZ59 168 aa10.59□□□□□ -0.71
PRPF4-202ENST00000374199 CDIPTO14735 213 aa10.59□□□□□ -0.71
PRPF4-202ENST00000374199 MZT1Q08AG7 82 aa10.59□□□□□ -0.71
PRPF4-202ENST00000374199 SLC9A3R2Q15599 337 aa10.59□□□□□ -0.71
PRPF4-202ENST00000374199 OR8H1Q8NGG4 311 aa10.59□□□□□ -0.71
PRPF4-202ENST00000374199 CYTL1Q9NRR1 136 aa10.59□□□□□ -0.71
PRPF4-202ENST00000374199 TINAGQ9UJW2 476 aa10.59□□□□□ -0.71
PRPF4-202ENST00000374199 HEXAP06865 529 aa10.58□□□□□ -0.72
PRPF4-202ENST00000374199 TESK1Q15569 626 aa10.58□□□□□ -0.72
PRPF4-202ENST00000374199 Q8TCH9 128 aa10.58□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 232.9 ms