RNA–Protein interactions for RNA: ENST00000372748.7

COL9A2-202, Transcript of collagen type IX alpha 2 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL9A2, Length 2,862 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A2-202ENST00000372748 NABP1Q96AH0 204 aa12.78□□□□□ -0.36
COL9A2-202ENST00000372748 SPACA9Q96E40 222 aaPredicted RBP12.78□□□□□ -0.36
COL9A2-202ENST00000372748 BORCS8Q96FH0 119 aa12.78□□□□□ -0.36
COL9A2-202ENST00000372748 CDX2Q99626 313 aaPredicted RBP12.78□□□□□ -0.36
COL9A2-202ENST00000372748 ZNF442Q9H7R0 627 aa12.78□□□□□ -0.36
COL9A2-202ENST00000372748 LYRM2Q9NU23 88 aaPredicted RBP12.78□□□□□ -0.36
COL9A2-202ENST00000372748 OCIAD1Q9NX40 245 aa12.78□□□□□ -0.36
COL9A2-202ENST00000372748 ZFP92A6NM28 416 aa12.78□□□□□ -0.36
COL9A2-202ENST00000372748 TRDCB7Z8K6 153 aa12.78□□□□□ -0.36
COL9A2-202ENST00000372748 HSPB1P04792 205 aaKnown RBP12.78□□□□□ -0.36
COL9A2-202ENST00000372748 PATE4P0C8F1 98 aa12.78□□□□□ -0.36
COL9A2-202ENST00000372748 PGA5P0DJD9 388 aa12.78□□□□□ -0.36
COL9A2-202ENST00000372748 CCDC71LQ8N9Z2 235 aa12.78□□□□□ -0.36
COL9A2-202ENST00000372748 ADPRHL1Q8NDY3 354 aa12.78□□□□□ -0.36
COL9A2-202ENST00000372748 RNF138Q8WVD3 245 aa12.78□□□□□ -0.36
COL9A2-202ENST00000372748 PACRGQ96M98 296 aaPredicted RBP12.78□□□□□ -0.36
COL9A2-202ENST00000372748 CRLF2Q9HC73 371 aa12.78□□□□□ -0.36
COL9A2-202ENST00000372748 WNT16Q9UBV4 365 aa12.78□□□□□ -0.36
COL9A2-202ENST00000372748 BTBD17A6NE02 478 aa12.77□□□□□ -0.36
COL9A2-202ENST00000372748 FUT3P21217 361 aa12.77□□□□□ -0.36
COL9A2-202ENST00000372748 GNRHRP30968 328 aa12.77□□□□□ -0.36
COL9A2-202ENST00000372748 MPV17LQ2QL34 196 aa12.77□□□□□ -0.36
COL9A2-202ENST00000372748 ZNF506Q5JVG8 444 aa12.77□□□□□ -0.36
COL9A2-202ENST00000372748 ZNF880Q6PDB4 577 aa12.77□□□□□ -0.36
COL9A2-202ENST00000372748 TBC1D26Q86UD7 250 aa12.77□□□□□ -0.36
COL9A2-202ENST00000372748 ZNF100Q8IYN0 542 aa12.77□□□□□ -0.36
COL9A2-202ENST00000372748 SNIP1Q8TAD8 396 aaKnown RBP12.77□□□□□ -0.36
COL9A2-202ENST00000372748 CCDC74BQ96LY2 380 aa12.77□□□□□ -0.36
COL9A2-202ENST00000372748 SSX3Q99909 188 aa12.77□□□□□ -0.36
COL9A2-202ENST00000372748 TMEM222Q9H0R3 208 aa12.77□□□□□ -0.36
COL9A2-202ENST00000372748 FREM2Q5SZK8 3169 aa12.77□□□□□ -0.37
COL9A2-202ENST00000372748 OR7C1O76099 320 aaPredicted RBP12.77□□□□□ -0.37
COL9A2-202ENST00000372748 CDS2O95674 445 aa12.77□□□□□ -0.37
COL9A2-202ENST00000372748 PTBP3O95758 552 aaKnown RBP12.77□□□□□ -0.37
COL9A2-202ENST00000372748 CD200P41217 278 aa12.77□□□□□ -0.37
COL9A2-202ENST00000372748 OSR2Q8N2R0 312 aa12.77□□□□□ -0.37
COL9A2-202ENST00000372748 CPNE4Q96A23 557 aaPredicted RBP12.77□□□□□ -0.37
COL9A2-202ENST00000372748 SLC7A10Q9NS82 523 aa12.77□□□□□ -0.37
COL9A2-202ENST00000372748 TTC28Q96AY4 2481 aa12.76□□□□□ -0.37
COL9A2-202ENST00000372748 RPL36A-HNRNPH2H7BZ11 118 aa12.76□□□□□ -0.37
COL9A2-202ENST00000372748 LCATP04180 440 aa12.76□□□□□ -0.37
COL9A2-202ENST00000372748 OTX1P32242 354 aaPredicted RBP12.76□□□□□ -0.37
COL9A2-202ENST00000372748 EIF3IQ13347 325 aaKnown RBP12.76□□□□□ -0.37
COL9A2-202ENST00000372748 ZNF385CQ66K41 422 aaPredicted RBP12.76□□□□□ -0.37
COL9A2-202ENST00000372748 FAM180AQ6UWF9 173 aa12.76□□□□□ -0.37
COL9A2-202ENST00000372748 DPPA2Q7Z7J5 298 aa12.76□□□□□ -0.37
COL9A2-202ENST00000372748 SPTSSAQ969W0 71 aa12.76□□□□□ -0.37
COL9A2-202ENST00000372748 SPSB1Q96BD6 273 aa12.76□□□□□ -0.37
COL9A2-202ENST00000372748 SIRT7Q9NRC8 400 aa12.76□□□□□ -0.37
COL9A2-202ENST00000372748 TSTD3H0UI37 97 aa12.76□□□□□ -0.37
COL9A2-202ENST00000372748 DHHO43323 396 aa12.76□□□□□ -0.37
COL9A2-202ENST00000372748 CHST1O43916 411 aa12.76□□□□□ -0.37
COL9A2-202ENST00000372748 HLA-HP01893 362 aa12.76□□□□□ -0.37
COL9A2-202ENST00000372748 REC114Q7Z4M0 266 aa12.76□□□□□ -0.37
COL9A2-202ENST00000372748 SLC35E3Q7Z769 313 aa12.76□□□□□ -0.37
COL9A2-202ENST00000372748 THNSL2Q86YJ6 484 aa12.76□□□□□ -0.37
COL9A2-202ENST00000372748 HIST1H2BLQ99880 126 aa12.76□□□□□ -0.37
COL9A2-202ENST00000372748 SLC25A31Q9H0C2 315 aa12.76□□□□□ -0.37
COL9A2-202ENST00000372748 CHCHD2Q9Y6H1 151 aaPredicted RBP12.76□□□□□ -0.37
COL9A2-202ENST00000372748 PKIAP61925 76 aa12.75□□□□□ -0.37
COL9A2-202ENST00000372748 TLE1Q04724 770 aa12.75□□□□□ -0.37
COL9A2-202ENST00000372748 ZNF774Q6NX45 483 aa12.75□□□□□ -0.37
COL9A2-202ENST00000372748 C1orf87Q8N0U7 546 aa12.75□□□□□ -0.37
COL9A2-202ENST00000372748 SPEM1Q8N4L4 309 aa12.75□□□□□ -0.37
COL9A2-202ENST00000372748 IL22RA1Q8N6P7 574 aa12.75□□□□□ -0.37
COL9A2-202ENST00000372748 ELOA3CA0A087WX78 387 aaPredicted RBP12.75□□□□□ -0.37
COL9A2-202ENST00000372748 IGLV3-32A0A0A0MS00 114 aa12.75□□□□□ -0.37
COL9A2-202ENST00000372748 PHOX2AO14813 284 aa12.75□□□□□ -0.37
COL9A2-202ENST00000372748 IL2RGP31785 369 aa12.75□□□□□ -0.37
COL9A2-202ENST00000372748 FGF8P55075 233 aaPredicted RBP12.75□□□□□ -0.37
COL9A2-202ENST00000372748 TLE4Q04727 773 aa12.75□□□□□ -0.37
COL9A2-202ENST00000372748 Q3ZCU0 254 aa12.75□□□□□ -0.37
COL9A2-202ENST00000372748 ZNF818PQ6ZRF7 136 aa12.75□□□□□ -0.37
COL9A2-202ENST00000372748 SELENOHQ8IZQ5 122 aaKnown RBP12.75□□□□□ -0.37
COL9A2-202ENST00000372748 ULBP2Q9BZM5 246 aa12.75□□□□□ -0.37
COL9A2-202ENST00000372748 ZNF665Q9H7R5 613 aa12.75□□□□□ -0.37
COL9A2-202ENST00000372748 LY6G6EA0A0G2JKS1 128 aa12.75□□□□□ -0.37
COL9A2-202ENST00000372748 ZNF732B4DXR9 585 aa12.75□□□□□ -0.37
COL9A2-202ENST00000372748 NPIPA2E9PIF3 369 aa12.75□□□□□ -0.37
COL9A2-202ENST00000372748 NPIPA3F8WFD2 350 aa12.75□□□□□ -0.37
COL9A2-202ENST00000372748 NRASP01111 189 aa12.75□□□□□ -0.37
COL9A2-202ENST00000372748 MALLQ13021 153 aa12.75□□□□□ -0.37
COL9A2-202ENST00000372748 HIST2H3PS2Q5TEC6 136 aa12.75□□□□□ -0.37
COL9A2-202ENST00000372748 SP5Q6BEB4 398 aaPredicted RBP12.75□□□□□ -0.37
COL9A2-202ENST00000372748 SLC25A24Q6NUK1 477 aa12.75□□□□□ -0.37
COL9A2-202ENST00000372748 LCN15Q6UWW0 184 aa12.75□□□□□ -0.37
COL9A2-202ENST00000372748 GAPTQ8N292 157 aa12.75□□□□□ -0.37
COL9A2-202ENST00000372748 OR8G5Q8NG78 346 aa12.75□□□□□ -0.37
COL9A2-202ENST00000372748 GNPNAT1Q96EK6 184 aaPredicted RBP12.75□□□□□ -0.37
COL9A2-202ENST00000372748 U3KQA8 63 aa12.75□□□□□ -0.37
COL9A2-202ENST00000372748 A0A087WZY1 265 aa12.74□□□□□ -0.37
COL9A2-202ENST00000372748 SMCO3A2RU48 225 aa12.74□□□□□ -0.37
COL9A2-202ENST00000372748 HSPB6O14558 160 aa12.74□□□□□ -0.37
COL9A2-202ENST00000372748 TERTO14746 1132 aaKnown RBP12.74□□□□□ -0.37
COL9A2-202ENST00000372748 TOX3O15405 576 aaPredicted RBP12.74□□□□□ -0.37
COL9A2-202ENST00000372748 ST8SIA5O15466 376 aa12.74□□□□□ -0.37
COL9A2-202ENST00000372748 MMP9P14780 707 aa12.74□□□□□ -0.37
COL9A2-202ENST00000372748 TCN2P20062 427 aa12.74□□□□□ -0.37
COL9A2-202ENST00000372748 UCP3P55916 312 aa12.74□□□□□ -0.37
COL9A2-202ENST00000372748 RAET1LQ5VY80 246 aa12.74□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 60.5 ms