RNA–Protein interactions for RNA: ENST00000370573.8

MCF2-202, Transcript of MCF.2 cell line derived transforming sequence, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene MCF2, Length 2,583 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2-202ENST00000370573 TMEM272A0A1B0GTI8 110 aa2.99□□□□□ -1.93
MCF2-202ENST00000370573 A0A1B0GWJ7 208 aa2.99□□□□□ -1.93
MCF2-202ENST00000370573 ANKRD30BLA7E2S9 258 aa2.99□□□□□ -1.93
MCF2-202ENST00000370573 ZNF732B4DXR9 585 aa2.99□□□□□ -1.93
MCF2-202ENST00000370573 VCYO14598 125 aa2.99□□□□□ -1.93
MCF2-202ENST00000370573 MLNRO43193 412 aa2.99□□□□□ -1.93
MCF2-202ENST00000370573 IGKV1D-12P01611 117 aa2.99□□□□□ -1.93
MCF2-202ENST00000370573 IGHV3-13P01766 116 aa2.99□□□□□ -1.93
MCF2-202ENST00000370573 EIF4EP06730 217 aaKnown RBP2.99□□□□□ -1.93
MCF2-202ENST00000370573 HCKP08631 526 aa2.99□□□□□ -1.93
MCF2-202ENST00000370573 OCMP0CE72 109 aaPredicted RBP2.99□□□□□ -1.93
MCF2-202ENST00000370573 CALCBP10092 127 aa2.99□□□□□ -1.93
MCF2-202ENST00000370573 SELEP16581 610 aa2.99□□□□□ -1.93
MCF2-202ENST00000370573 HTR2CP28335 458 aa2.99□□□□□ -1.93
MCF2-202ENST00000370573 ZNF93P35789 620 aaPredicted RBP2.99□□□□□ -1.93
MCF2-202ENST00000370573 RBMXP38159 391 aaKnown RBP2.99□□□□□ -1.93
MCF2-202ENST00000370573 PTGFRP43088 359 aa2.99□□□□□ -1.93
MCF2-202ENST00000370573 EVX1P49640 407 aa2.99□□□□□ -1.93
MCF2-202ENST00000370573 COMPP49747 757 aaPredicted RBP2.99□□□□□ -1.93
MCF2-202ENST00000370573 GPM6AP51674 278 aa2.99□□□□□ -1.93
MCF2-202ENST00000370573 FUT6P51993 359 aa2.99□□□□□ -1.93
MCF2-202ENST00000370573 MTCP1P56278 107 aa2.99□□□□□ -1.93
MCF2-202ENST00000370573 FOXI1Q12951 378 aa2.99□□□□□ -1.93
MCF2-202ENST00000370573 MADCAM1Q13477 382 aa2.99□□□□□ -1.93
MCF2-202ENST00000370573 MOGQ16653 247 aa2.99□□□□□ -1.93
MCF2-202ENST00000370573 ESCO2Q56NI9 601 aa2.99□□□□□ -1.93
MCF2-202ENST00000370573 SPRNQ5BIV9 151 aa2.99□□□□□ -1.93
MCF2-202ENST00000370573 BEX5Q5H9J7 111 aa2.99□□□□□ -1.93
MCF2-202ENST00000370573 DHRS7BQ6IAN0 325 aaPredicted RBP2.99□□□□□ -1.93
MCF2-202ENST00000370573 OR10K2Q6IF99 312 aa2.99□□□□□ -1.93
MCF2-202ENST00000370573 UNQ6126/PRO20091Q6UXV3 157 aa2.99□□□□□ -1.93
MCF2-202ENST00000370573 ASCL4Q6XD76 172 aa2.99□□□□□ -1.93
MCF2-202ENST00000370573 IDO2Q6ZQW0 420 aa2.99□□□□□ -1.93
MCF2-202ENST00000370573 DCDC5Q6ZRR9 648 aa2.99□□□□□ -1.93
MCF2-202ENST00000370573 CCDC190Q86UF4 302 aa2.99□□□□□ -1.93
MCF2-202ENST00000370573 ANGPTL5Q86XS5 388 aa2.99□□□□□ -1.93
MCF2-202ENST00000370573 CALHM1Q8IU99 346 aa2.99□□□□□ -1.93
MCF2-202ENST00000370573 CDH26Q8IXH8 852 aa2.99□□□□□ -1.93
MCF2-202ENST00000370573 C11orf53Q8IXP5 236 aa2.99□□□□□ -1.93
MCF2-202ENST00000370573 C1orf174Q8IYL3 243 aa2.99□□□□□ -1.93
MCF2-202ENST00000370573 ZDHHC23Q8IYP9 409 aa2.99□□□□□ -1.93
MCF2-202ENST00000370573 SAMD12Q8N8I0 201 aa2.99□□□□□ -1.93
MCF2-202ENST00000370573 ACBD4Q8NC06 268 aa2.99□□□□□ -1.93
MCF2-202ENST00000370573 OR5D18Q8NGL1 313 aa2.99□□□□□ -1.93
MCF2-202ENST00000370573 LGALS14Q8TCE9 139 aa2.99□□□□□ -1.93
MCF2-202ENST00000370573 ACOT12Q8WYK0 555 aa2.99□□□□□ -1.93
MCF2-202ENST00000370573 SNAPC3Q92966 411 aa2.99□□□□□ -1.93
MCF2-202ENST00000370573 MRPL24Q96A35 216 aaKnown RBP2.99□□□□□ -1.93
MCF2-202ENST00000370573 SLC25A38Q96DW6 304 aa2.99□□□□□ -1.93
MCF2-202ENST00000370573 CYYR1Q96J86 154 aa2.99□□□□□ -1.93
MCF2-202ENST00000370573 RNF170Q96K19 258 aa2.99□□□□□ -1.93
MCF2-202ENST00000370573 FAM110AQ9BQ89 295 aa2.99□□□□□ -1.93
MCF2-202ENST00000370573 SOSTQ9BQB4 213 aa2.99□□□□□ -1.93
MCF2-202ENST00000370573 TMEM204Q9BSN7 226 aa2.99□□□□□ -1.93
MCF2-202ENST00000370573 ESRP2Q9H6T0 727 aaKnown RBP2.99□□□□□ -1.93
MCF2-202ENST00000370573 METTL17Q9H7H0 456 aaPredicted RBP2.99□□□□□ -1.93
MCF2-202ENST00000370573 NGBQ9NPG2 151 aa2.99□□□□□ -1.93
MCF2-202ENST00000370573 CA10Q9NS85 328 aa2.99□□□□□ -1.93
MCF2-202ENST00000370573 TMEM100Q9NV29 134 aa2.99□□□□□ -1.93
MCF2-202ENST00000370573 ABRACLQ9P1F3 81 aa2.99□□□□□ -1.93
MCF2-202ENST00000370573 SPATA2Q9UM82 520 aa2.99□□□□□ -1.93
MCF2-202ENST00000370573 MRPS28Q9Y2Q9 187 aaKnown RBP2.99□□□□□ -1.93
MCF2-202ENST00000370573 MPC1Q9Y5U8 109 aa2.99□□□□□ -1.93
MCF2-202ENST00000370573 PEX16Q9Y5Y5 336 aa2.99□□□□□ -1.93
MCF2-202ENST00000370573 HELZ2Q9BYK8 2649 aaKnown RBP2.98□□□□□ -1.93
MCF2-202ENST00000370573 TACC2O95359 2948 aa2.98□□□□□ -1.93
MCF2-202ENST00000370573 IGHV3-64DA0A0J9YX35 117 aa2.98□□□□□ -1.93
MCF2-202ENST00000370573 A0A1W2PP11 408 aa2.98□□□□□ -1.93
MCF2-202ENST00000370573 A0A1W2PPR1 153 aa2.98□□□□□ -1.93
MCF2-202ENST00000370573 CLEC18AA5D8T8 446 aa2.98□□□□□ -1.93
MCF2-202ENST00000370573 ZSCAN5BA6NJL1 495 aa2.98□□□□□ -1.93
MCF2-202ENST00000370573 F5H5P2 479 aa2.98□□□□□ -1.93
MCF2-202ENST00000370573 F8VVB4 439 aa2.98□□□□□ -1.93
MCF2-202ENST00000370573 F8VWA3 439 aa2.98□□□□□ -1.93
MCF2-202ENST00000370573 BOLA2-SMG1P6H3BVE0 249 aa2.98□□□□□ -1.93
MCF2-202ENST00000370573 RGS5O15539 181 aa2.98□□□□□ -1.93
MCF2-202ENST00000370573 ANGPTL7O43827 346 aa2.98□□□□□ -1.93
MCF2-202ENST00000370573 TIMM8AO60220 97 aaPredicted RBP2.98□□□□□ -1.93
MCF2-202ENST00000370573 NXPH3O95157 252 aa2.98□□□□□ -1.93
MCF2-202ENST00000370573 CRYZL1O95825 349 aa2.98□□□□□ -1.93
MCF2-202ENST00000370573 ERCC1P07992 297 aaPredicted RBP2.98□□□□□ -1.93
MCF2-202ENST00000370573 OR4A8P0C604 315 aa2.98□□□□□ -1.93
MCF2-202ENST00000370573 ALDH3B1P43353 468 aa2.98□□□□□ -1.93
MCF2-202ENST00000370573 POU3F4P49335 361 aa2.98□□□□□ -1.93
MCF2-202ENST00000370573 EIF2B2P49770 351 aaKnown RBP2.98□□□□□ -1.93
MCF2-202ENST00000370573 ATP1B3P54709 279 aa2.98□□□□□ -1.93
MCF2-202ENST00000370573 KLF3P57682 345 aaPredicted RBP2.98□□□□□ -1.93
MCF2-202ENST00000370573 PDZK1IP1Q13113 114 aa2.98□□□□□ -1.93
MCF2-202ENST00000370573 UNC119Q13432 240 aa2.98□□□□□ -1.93
MCF2-202ENST00000370573 AARDQ4LEZ3 155 aa2.98□□□□□ -1.93
MCF2-202ENST00000370573 FAM76BQ5HYJ3 339 aa2.98□□□□□ -1.93
MCF2-202ENST00000370573 SHEQ5VZ18 495 aa2.98□□□□□ -1.93
MCF2-202ENST00000370573 FAM122CQ6P4D5 195 aa2.98□□□□□ -1.93
MCF2-202ENST00000370573 CNIH2Q6PI25 160 aa2.98□□□□□ -1.93
MCF2-202ENST00000370573 METAP1DQ6UB28 335 aaPredicted RBP2.98□□□□□ -1.93
MCF2-202ENST00000370573 GLIPR1L1Q6UWM5 242 aa2.98□□□□□ -1.93
MCF2-202ENST00000370573 CLEC18BQ6UXF7 455 aa2.98□□□□□ -1.93
MCF2-202ENST00000370573 CCBE1Q6UXH8 406 aaPredicted RBP2.98□□□□□ -1.93
MCF2-202ENST00000370573 CLEC18CQ8NCF0 446 aa2.98□□□□□ -1.93
MCF2-202ENST00000370573 TMEM104Q8NE00 496 aa2.98□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 62.9 ms