RNA–Protein interactions for RNA: ENST00000369592.1

SMNDC1-201, Transcript of survival motor neuron domain containing 1, humanhuman

APPRIS P1 TSL 3 BASIC

Gene SMNDC1, Length 1,110 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMNDC1-201ENST00000369592 KRTAP10-3P60369 221 aa16.6■□□□□ 0.25
SMNDC1-201ENST00000369592 RSU1Q15404 277 aa16.6■□□□□ 0.25
SMNDC1-201ENST00000369592 C17orf58Q2M2W7 97 aa16.6■□□□□ 0.25
SMNDC1-201ENST00000369592 PRR31Q5SQ13 230 aa16.6■□□□□ 0.25
SMNDC1-201ENST00000369592 BAIAP2L2Q6UXY1 529 aa16.6■□□□□ 0.25
SMNDC1-201ENST00000369592 OR5M11Q96RB7 305 aa16.6■□□□□ 0.25
SMNDC1-201ENST00000369592 METTL9Q9H1A3 318 aa16.6■□□□□ 0.25
SMNDC1-201ENST00000369592 PPIL3Q9H2H8 161 aaKnown RBP16.6■□□□□ 0.25
SMNDC1-201ENST00000369592 A0A087X0M5 115 aa16.59■□□□□ 0.25
SMNDC1-201ENST00000369592 TRGV10A0A0A0MS01 117 aa16.59■□□□□ 0.25
SMNDC1-201ENST00000369592 PNMA8CA0A1B0GUJ8 204 aa16.59■□□□□ 0.25
SMNDC1-201ENST00000369592 A0A1B0GX30 115 aa16.59■□□□□ 0.25
SMNDC1-201ENST00000369592 PTGES3LE9PB15 166 aa16.59■□□□□ 0.25
SMNDC1-201ENST00000369592 SC5DO75845 299 aa16.59■□□□□ 0.25
SMNDC1-201ENST00000369592 DYNLT3P51808 116 aa16.59■□□□□ 0.25
SMNDC1-201ENST00000369592 RBM11P57052 281 aaKnown RBP16.59■□□□□ 0.25
SMNDC1-201ENST00000369592 KRBOX4Q5JUW0 171 aa16.59■□□□□ 0.25
SMNDC1-201ENST00000369592 MINOS1Q5TGZ0 78 aa16.59■□□□□ 0.25
SMNDC1-201ENST00000369592 RSBN1Q5VWQ0 802 aaPredicted RBP16.59■□□□□ 0.25
SMNDC1-201ENST00000369592 MYDGFQ969H8 173 aa16.59■□□□□ 0.25
SMNDC1-201ENST00000369592 FOXRED1Q96CU9 486 aaPredicted RBP16.59■□□□□ 0.25
SMNDC1-201ENST00000369592 NR1H4Q96RI1 486 aaPredicted RBP16.59■□□□□ 0.25
SMNDC1-201ENST00000369592 CITED1Q99966 193 aa16.59■□□□□ 0.25
SMNDC1-201ENST00000369592 MND1Q9BWT6 205 aa16.59■□□□□ 0.25
SMNDC1-201ENST00000369592 ZNF696Q9H7X3 374 aa16.59■□□□□ 0.25
SMNDC1-201ENST00000369592 MINOS1-NBL1R4GNA1 71 aa16.59■□□□□ 0.25
SMNDC1-201ENST00000369592 A0A1W2PPK0 400 aa16.58■□□□□ 0.24
SMNDC1-201ENST00000369592 H0YHG0 523 aa16.58■□□□□ 0.24
SMNDC1-201ENST00000369592 HTR3BO95264 441 aa16.58■□□□□ 0.24
SMNDC1-201ENST00000369592 IGLV1-47P01700 117 aa16.58■□□□□ 0.24
SMNDC1-201ENST00000369592 CD37P11049 281 aa16.58■□□□□ 0.24
SMNDC1-201ENST00000369592 KCNJ3P48549 501 aa16.58■□□□□ 0.24
SMNDC1-201ENST00000369592 ATXN7L3Q14CW9 347 aaPredicted RBP16.58■□□□□ 0.24
SMNDC1-201ENST00000369592 SPHARQ15513 63 aa16.58■□□□□ 0.24
SMNDC1-201ENST00000369592 PRAMEF5Q5TYX0 476 aa16.58■□□□□ 0.24
SMNDC1-201ENST00000369592 DHRS7BQ6IAN0 325 aaPredicted RBP16.58■□□□□ 0.24
SMNDC1-201ENST00000369592 OSR2Q8N2R0 312 aa16.58■□□□□ 0.24
SMNDC1-201ENST00000369592 OR4P4Q8NGL7 312 aa16.58■□□□□ 0.24
SMNDC1-201ENST00000369592 PLPPR1Q8TBJ4 325 aa16.58■□□□□ 0.24
SMNDC1-201ENST00000369592 CLEC7AQ9BXN2 247 aa16.58■□□□□ 0.24
SMNDC1-201ENST00000369592 FAM192AQ9GZU8 254 aa16.58■□□□□ 0.24
SMNDC1-201ENST00000369592 GAL3ST2Q9H3Q3 398 aa16.58■□□□□ 0.24
SMNDC1-201ENST00000369592 SCN3BQ9NY72 215 aa16.58■□□□□ 0.24
SMNDC1-201ENST00000369592 CKLFQ9UBR5 152 aa16.58■□□□□ 0.24
SMNDC1-201ENST00000369592 ING4Q9UNL4 249 aa16.58■□□□□ 0.24
SMNDC1-201ENST00000369592 ST3GAL6Q9Y274 331 aa16.58■□□□□ 0.24
SMNDC1-201ENST00000369592 VWFP04275 2813 aa16.57■□□□□ 0.24
SMNDC1-201ENST00000369592 A0A1W2PP11 408 aa16.57■□□□□ 0.24
SMNDC1-201ENST00000369592 ZNF729A6NN14 1252 aaPredicted RBP16.57■□□□□ 0.24
SMNDC1-201ENST00000369592 CDK2P24941 298 aa16.57■□□□□ 0.24
SMNDC1-201ENST00000369592 SRSF4Q08170 494 aaKnown RBP16.57■□□□□ 0.24
SMNDC1-201ENST00000369592 GPR50Q13585 617 aa16.57■□□□□ 0.24
SMNDC1-201ENST00000369592 PAN3Q58A45 887 aaKnown RBP16.57■□□□□ 0.24
SMNDC1-201ENST00000369592 UTF1Q5T230 341 aa16.57■□□□□ 0.24
SMNDC1-201ENST00000369592 CCBE1Q6UXH8 406 aaPredicted RBP16.57■□□□□ 0.24
SMNDC1-201ENST00000369592 TRAPPC6BQ86SZ2 158 aa16.57■□□□□ 0.24
SMNDC1-201ENST00000369592 LINC00596Q86U02 117 aa16.57■□□□□ 0.24
SMNDC1-201ENST00000369592 THRSPQ92748 146 aa16.57■□□□□ 0.24
SMNDC1-201ENST00000369592 OR6C3Q9NZP0 311 aa16.57■□□□□ 0.24
SMNDC1-201ENST00000369592 KIF25Q9UIL4 384 aa16.57■□□□□ 0.24
SMNDC1-201ENST00000369592 RNF114Q9Y508 228 aa16.57■□□□□ 0.24
SMNDC1-201ENST00000369592 KBTBD11-OT1A0A1B0GTJ5 212 aa16.56■□□□□ 0.24
SMNDC1-201ENST00000369592 GEMIN2O14893 280 aaKnown RBP16.56■□□□□ 0.24
SMNDC1-201ENST00000369592 CHST1O43916 411 aa16.56■□□□□ 0.24
SMNDC1-201ENST00000369592 ZNF780AO75290 641 aaPredicted RBP16.56■□□□□ 0.24
SMNDC1-201ENST00000369592 CRHBPP24387 322 aa16.56■□□□□ 0.24
SMNDC1-201ENST00000369592 INSL4Q14641 139 aa16.56■□□□□ 0.24
SMNDC1-201ENST00000369592 SLC35E4Q6ICL7 350 aa16.56■□□□□ 0.24
SMNDC1-201ENST00000369592 OR52W1Q6IF63 320 aa16.56■□□□□ 0.24
SMNDC1-201ENST00000369592 LIAT1Q6ZQX7 453 aa16.56■□□□□ 0.24
SMNDC1-201ENST00000369592 RTN4RL2Q86UN3 420 aa16.56■□□□□ 0.24
SMNDC1-201ENST00000369592 MS4A15Q8N5U1 240 aa16.56■□□□□ 0.24
SMNDC1-201ENST00000369592 SUMF2Q8NBJ7 301 aa16.56■□□□□ 0.24
SMNDC1-201ENST00000369592 OR4D6Q8NGJ1 314 aa16.56■□□□□ 0.24
SMNDC1-201ENST00000369592 OR13A1Q8NGR1 328 aa16.56■□□□□ 0.24
SMNDC1-201ENST00000369592 FBLN5Q9UBX5 448 aa16.56■□□□□ 0.24
SMNDC1-201ENST00000369592 TPRKBQ9Y3C4 175 aa16.56■□□□□ 0.24
SMNDC1-201ENST00000369592 CMYA5Q8N3K9 4069 aa16.55■□□□□ 0.24
SMNDC1-201ENST00000369592 A6NDX4 124 aa16.55■□□□□ 0.24
SMNDC1-201ENST00000369592 FAM90A22PA8MWA6 464 aa16.55■□□□□ 0.24
SMNDC1-201ENST00000369592 NPIPB11E5RHQ5 1161 aa16.55■□□□□ 0.24
SMNDC1-201ENST00000369592 SSX2Q16385 188 aa16.55■□□□□ 0.24
SMNDC1-201ENST00000369592 LY6EQ16553 131 aa16.55■□□□□ 0.24
SMNDC1-201ENST00000369592 MPV17LQ2QL34 196 aa16.55■□□□□ 0.24
SMNDC1-201ENST00000369592 ACSM3Q53FZ2 586 aa16.55■□□□□ 0.24
SMNDC1-201ENST00000369592 IZUMO2Q6UXV1 221 aa16.55■□□□□ 0.24
SMNDC1-201ENST00000369592 ABHD12Q8N2K0 398 aa16.55■□□□□ 0.24
SMNDC1-201ENST00000369592 MUL1Q969V5 352 aa16.55■□□□□ 0.24
SMNDC1-201ENST00000369592 KIRREL1Q96J84 757 aa16.55■□□□□ 0.24
SMNDC1-201ENST00000369592 DPCDQ9BVM2 203 aaPredicted RBP16.55■□□□□ 0.24
SMNDC1-201ENST00000369592 BARHL1Q9BZE3 327 aa16.55■□□□□ 0.24
SMNDC1-201ENST00000369592 VCX3BQ9H321 246 aa16.55■□□□□ 0.24
SMNDC1-201ENST00000369592 ZNF286AQ9HBT8 521 aa16.55■□□□□ 0.24
SMNDC1-201ENST00000369592 RCC2Q9P258 522 aaKnown RBP16.55■□□□□ 0.24
SMNDC1-201ENST00000369592 TCF19Q9Y242 345 aa16.55■□□□□ 0.24
SMNDC1-201ENST00000369592 MRPS28Q9Y2Q9 187 aaKnown RBP16.55■□□□□ 0.24
SMNDC1-201ENST00000369592 LY6LH3BQJ8 138 aa16.54■□□□□ 0.24
SMNDC1-201ENST00000369592 HSPB6O14558 160 aa16.54■□□□□ 0.24
SMNDC1-201ENST00000369592 CSTBP04080 98 aaKnown RBP16.54■□□□□ 0.24
SMNDC1-201ENST00000369592 MAS1P04201 325 aa16.54■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms