RNA–Protein interactions for RNA: ENST00000356000.7

RTN3-205, Transcript of reticulon 3, humanhuman

TSL 2 BASIC

Gene RTN3, Length 2,645 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3-205ENST00000356000 NAA60Q9H7X0 242 aa13.66□□□□□ -0.22
RTN3-205ENST00000356000 FAM166BA8MTA8 275 aa13.65□□□□□ -0.22
RTN3-205ENST00000356000 PROB1E7EW31 1015 aa13.65□□□□□ -0.22
RTN3-205ENST00000356000 GABRA3P34903 492 aa13.65□□□□□ -0.22
RTN3-205ENST00000356000 ZNF74Q16587 644 aa13.65□□□□□ -0.22
RTN3-205ENST00000356000 TMEM108Q6UXF1 575 aa13.65□□□□□ -0.22
RTN3-205ENST00000356000 Q6ZNB5 142 aa13.65□□□□□ -0.22
RTN3-205ENST00000356000 TCF24Q7RTU0 167 aa13.65□□□□□ -0.22
RTN3-205ENST00000356000 OR4N5Q8IXE1 308 aa13.65□□□□□ -0.22
RTN3-205ENST00000356000 OR6C1Q96RD1 312 aa13.65□□□□□ -0.22
RTN3-205ENST00000356000 PATZ1Q9HBE1 687 aaKnown RBP13.65□□□□□ -0.22
RTN3-205ENST00000356000 ZNF160Q9HCG1 818 aa13.65□□□□□ -0.22
RTN3-205ENST00000356000 LOC102724200A0A096LPH7 203 aaPredicted RBP13.65□□□□□ -0.22
RTN3-205ENST00000356000 IGHV2-26A0A0B4J1V2 119 aa13.65□□□□□ -0.22
RTN3-205ENST00000356000 CXorf51AA0A1B0GTR3 108 aa13.65□□□□□ -0.22
RTN3-205ENST00000356000 IGLC7A0M8Q6 106 aa13.65□□□□□ -0.22
RTN3-205ENST00000356000 C9orf172C9J069 976 aa13.65□□□□□ -0.22
RTN3-205ENST00000356000 DIRC3C9JPN6 131 aa13.65□□□□□ -0.22
RTN3-205ENST00000356000 HMGA1P17096 107 aaKnown RBP13.65□□□□□ -0.22
RTN3-205ENST00000356000 DYNLT3P51808 116 aa13.65□□□□□ -0.22
RTN3-205ENST00000356000 PIGPP57054 158 aa13.65□□□□□ -0.22
RTN3-205ENST00000356000 LIAT1Q6ZQX7 453 aa13.65□□□□□ -0.22
RTN3-205ENST00000356000 C1orf147Q96MC9 270 aaPredicted RBP13.65□□□□□ -0.22
RTN3-205ENST00000356000 FBXL7Q9UJT9 491 aa13.65□□□□□ -0.22
RTN3-205ENST00000356000 TRAV34A0A0B4J273 112 aa13.64□□□□□ -0.23
RTN3-205ENST00000356000 HIDE1A8MVS5 230 aa13.64□□□□□ -0.23
RTN3-205ENST00000356000 CEBPBP17676 345 aa13.64□□□□□ -0.23
RTN3-205ENST00000356000 ADMP35318 185 aa13.64□□□□□ -0.23
RTN3-205ENST00000356000 CD226Q15762 336 aa13.64□□□□□ -0.23
RTN3-205ENST00000356000 TMEM144Q7Z5S9 345 aa13.64□□□□□ -0.23
RTN3-205ENST00000356000 OR52R1Q8NGF1 315 aa13.64□□□□□ -0.23
RTN3-205ENST00000356000 KCNG3Q8TAE7 436 aa13.64□□□□□ -0.23
RTN3-205ENST00000356000 DUXBA0A1W2PPF3 345 aa13.64□□□□□ -0.23
RTN3-205ENST00000356000 GRIFINA4D1Z8 144 aa13.64□□□□□ -0.23
RTN3-205ENST00000356000 SERF1AO75920 110 aa13.64□□□□□ -0.23
RTN3-205ENST00000356000 GLIPR1L1Q6UWM5 242 aa13.64□□□□□ -0.23
RTN3-205ENST00000356000 NIT1Q86X76 327 aa13.64□□□□□ -0.23
RTN3-205ENST00000356000 ODF3L1Q8IXM7 274 aa13.64□□□□□ -0.23
RTN3-205ENST00000356000 PNKDQ8N490 385 aa13.64□□□□□ -0.23
RTN3-205ENST00000356000 KLHDC1Q8N7A1 406 aa13.64□□□□□ -0.23
RTN3-205ENST00000356000 GPR34Q9UPC5 381 aa13.64□□□□□ -0.23
RTN3-205ENST00000356000 A0A0U1RQK1 487 aa13.63□□□□□ -0.23
RTN3-205ENST00000356000 A0A1W2PNV4 684 aa13.63□□□□□ -0.23
RTN3-205ENST00000356000 P2RY10O00398 339 aa13.63□□□□□ -0.23
RTN3-205ENST00000356000 IFNA1P01562 189 aa13.63□□□□□ -0.23
RTN3-205ENST00000356000 ZNF93P35789 620 aaPredicted RBP13.63□□□□□ -0.23
RTN3-205ENST00000356000 RPL18Q07020 188 aaKnown RBP13.63□□□□□ -0.23
RTN3-205ENST00000356000 CRIPAKQ8N1N5 446 aa13.63□□□□□ -0.23
RTN3-205ENST00000356000 VN1R2Q8NFZ6 395 aa13.63□□□□□ -0.23
RTN3-205ENST00000356000 OR5B3Q8NH48 314 aa13.63□□□□□ -0.23
RTN3-205ENST00000356000 OR4S2Q8NH73 311 aa13.63□□□□□ -0.23
RTN3-205ENST00000356000 ZNF596Q8TC21 504 aa13.63□□□□□ -0.23
RTN3-205ENST00000356000 MSI2Q96DH6 328 aaKnown RBP13.63□□□□□ -0.23
RTN3-205ENST00000356000 FOXN4Q96NZ1 517 aa13.63□□□□□ -0.23
RTN3-205ENST00000356000 TMEM59Q9BXS4 323 aa13.63□□□□□ -0.23
RTN3-205ENST00000356000 RNF114Q9Y508 228 aa13.63□□□□□ -0.23
RTN3-205ENST00000356000 TNFRSF10CO14798 259 aa13.63□□□□□ -0.23
RTN3-205ENST00000356000 LINC00271P0C7V0 271 aa13.63□□□□□ -0.23
RTN3-205ENST00000356000 PLPP4Q5VZY2 271 aa13.63□□□□□ -0.23
RTN3-205ENST00000356000 LCN15Q6UWW0 184 aa13.63□□□□□ -0.23
RTN3-205ENST00000356000 NRSN1Q8IZ57 195 aa13.63□□□□□ -0.23
RTN3-205ENST00000356000 OR2A1Q8NGT9 310 aa13.63□□□□□ -0.23
RTN3-205ENST00000356000 PSMF1Q92530 271 aa13.63□□□□□ -0.23
RTN3-205ENST00000356000 SLC46A2Q9BY10 475 aa13.63□□□□□ -0.23
RTN3-205ENST00000356000 PARLQ9H300 379 aa13.63□□□□□ -0.23
RTN3-205ENST00000356000 BANF2Q9H503 90 aa13.63□□□□□ -0.23
RTN3-205ENST00000356000 RPRMQ9NS64 109 aa13.63□□□□□ -0.23
RTN3-205ENST00000356000 TET1Q8NFU7 2136 aa13.63□□□□□ -0.23
RTN3-205ENST00000356000 GDF9O60383 454 aa13.62□□□□□ -0.23
RTN3-205ENST00000356000 MPZL1O95297 269 aa13.62□□□□□ -0.23
RTN3-205ENST00000356000 ASAH2BP0C7U1 165 aa13.62□□□□□ -0.23
RTN3-205ENST00000356000 CPMP14384 443 aa13.62□□□□□ -0.23
RTN3-205ENST00000356000 YPEL3P61236 119 aaPredicted RBP13.62□□□□□ -0.23
RTN3-205ENST00000356000 FAM53BQ14153 422 aa13.62□□□□□ -0.23
RTN3-205ENST00000356000 ZNF726P1Q15940 193 aa13.62□□□□□ -0.23
RTN3-205ENST00000356000 LRRC10Q5BKY1 277 aa13.62□□□□□ -0.23
RTN3-205ENST00000356000 FFAR4Q5NUL3 377 aa13.62□□□□□ -0.23
RTN3-205ENST00000356000 WFDC8Q8IUA0 241 aa13.62□□□□□ -0.23
RTN3-205ENST00000356000 HIST2H2ABQ8IUE6 130 aaPredicted RBP13.62□□□□□ -0.23
RTN3-205ENST00000356000 OR52N5Q8NH56 324 aa13.62□□□□□ -0.23
RTN3-205ENST00000356000 DAZLQ92904 295 aaKnown RBP13.62□□□□□ -0.23
RTN3-205ENST00000356000 RYDENQ9NUL5 291 aaKnown RBP13.62□□□□□ -0.23
RTN3-205ENST00000356000 SERPINA7P05543 415 aa13.62□□□□□ -0.23
RTN3-205ENST00000356000 C8AP07357 584 aa13.62□□□□□ -0.23
RTN3-205ENST00000356000 RBPJQ06330 500 aa13.62□□□□□ -0.23
RTN3-205ENST00000356000 BAXQ07812 192 aa13.62□□□□□ -0.23
RTN3-205ENST00000356000 ACSF3Q4G176 576 aaPredicted RBP13.62□□□□□ -0.23
RTN3-205ENST00000356000 FAM78BQ5VT40 261 aa13.62□□□□□ -0.23
RTN3-205ENST00000356000 RNF144BQ7Z419 303 aa13.62□□□□□ -0.23
RTN3-205ENST00000356000 TCTEX1D1Q8N7M0 179 aa13.62□□□□□ -0.23
RTN3-205ENST00000356000 SLC38A9Q8NBW4 561 aa13.62□□□□□ -0.23
RTN3-205ENST00000356000 ADAT3Q96EY9 351 aaPredicted RBP13.62□□□□□ -0.23
RTN3-205ENST00000356000 LMLNQ96KR4 655 aa13.62□□□□□ -0.23
RTN3-205ENST00000356000 SMPXQ9UHP9 88 aa13.62□□□□□ -0.23
RTN3-205ENST00000356000 KIAA2026Q5HYC2 2103 aa13.62□□□□□ -0.23
RTN3-205ENST00000356000 ZNF891A8MT65 544 aaPredicted RBP13.61□□□□□ -0.23
RTN3-205ENST00000356000 HS3ST1O14792 307 aa13.61□□□□□ -0.23
RTN3-205ENST00000356000 CPEB2Q7Z5Q1 589 aaKnown RBP13.61□□□□□ -0.23
RTN3-205ENST00000356000 TMEM217Q8N7C4 229 aa13.61□□□□□ -0.23
RTN3-205ENST00000356000 PLPPR1Q8TBJ4 325 aa13.61□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms