RNA–Protein interactions for RNA: ENST00000354241.5

TRIM4-202, Transcript of tripartite motif containing 4, humanhuman

TSL 1 (best) BASIC

Gene TRIM4, Length 1,942 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM4-202ENST00000354241 MST1LQ2TV78 715 aa17.26■□□□□ 0.35
TRIM4-202ENST00000354241 ATPAF1Q5TC12 328 aaPredicted RBP17.26■□□□□ 0.35
TRIM4-202ENST00000354241 GLDNQ6ZMI3 551 aaPredicted RBP17.26■□□□□ 0.35
TRIM4-202ENST00000354241 ZNF843Q8N446 348 aa17.26■□□□□ 0.35
TRIM4-202ENST00000354241 EGLN1Q9GZT9 426 aa17.26■□□□□ 0.35
TRIM4-202ENST00000354241 VSIG4Q9Y279 399 aa17.26■□□□□ 0.35
TRIM4-202ENST00000354241 CCNKO75909 580 aa17.25■□□□□ 0.35
TRIM4-202ENST00000354241 IRF2P14316 349 aa17.25■□□□□ 0.35
TRIM4-202ENST00000354241 LMO1P25800 156 aa17.25■□□□□ 0.35
TRIM4-202ENST00000354241 RRAS2P62070 204 aaPredicted RBP17.25■□□□□ 0.35
TRIM4-202ENST00000354241 COL10A1Q03692 680 aa17.25■□□□□ 0.35
TRIM4-202ENST00000354241 FAM209AQ5JX71 171 aa17.25■□□□□ 0.35
TRIM4-202ENST00000354241 METTL11BQ5VVY1 283 aa17.25■□□□□ 0.35
TRIM4-202ENST00000354241 C20orf204Q6ZNR8 217 aa17.25■□□□□ 0.35
TRIM4-202ENST00000354241 FAM90A1Q86YD7 464 aa17.25■□□□□ 0.35
TRIM4-202ENST00000354241 MARCH1Q8TCQ1 289 aa17.25■□□□□ 0.35
TRIM4-202ENST00000354241 SAP30LQ9HAJ7 183 aa17.25■□□□□ 0.35
TRIM4-202ENST00000354241 METRNQ9UJH8 293 aa17.25■□□□□ 0.35
TRIM4-202ENST00000354241 PSPNO60542 156 aa17.25■□□□□ 0.35
TRIM4-202ENST00000354241 HPXP02790 462 aa17.25■□□□□ 0.35
TRIM4-202ENST00000354241 TRAPPC2P0DI81 140 aa17.25■□□□□ 0.35
TRIM4-202ENST00000354241 TRAPPC2BP0DI82 140 aa17.25■□□□□ 0.35
TRIM4-202ENST00000354241 OR5H8P0DN80 308 aa17.25■□□□□ 0.35
TRIM4-202ENST00000354241 PSG2P11465 335 aa17.25■□□□□ 0.35
TRIM4-202ENST00000354241 NPY4RP50391 375 aa17.25■□□□□ 0.35
TRIM4-202ENST00000354241 FAM201AQ5SY85 155 aa17.25■□□□□ 0.35
TRIM4-202ENST00000354241 SHEQ5VZ18 495 aa17.25■□□□□ 0.35
TRIM4-202ENST00000354241 SLC36A1Q7Z2H8 476 aa17.25■□□□□ 0.35
TRIM4-202ENST00000354241 MUC15Q8N387 334 aa17.25■□□□□ 0.35
TRIM4-202ENST00000354241 CD177Q8N6Q3 437 aa17.25■□□□□ 0.35
TRIM4-202ENST00000354241 ZDHHC22Q8N966 263 aa17.25■□□□□ 0.35
TRIM4-202ENST00000354241 OR6F1Q8NGZ6 308 aa17.25■□□□□ 0.35
TRIM4-202ENST00000354241 Q8TCH9 128 aa17.25■□□□□ 0.35
TRIM4-202ENST00000354241 MED28Q9H204 178 aa17.25■□□□□ 0.35
TRIM4-202ENST00000354241 MS4A5Q9H3V2 200 aa17.25■□□□□ 0.35
TRIM4-202ENST00000354241 GPN1Q9HCN4 374 aaPredicted RBP17.25■□□□□ 0.35
TRIM4-202ENST00000354241 A8MV72 311 aaPredicted RBP17.24■□□□□ 0.35
TRIM4-202ENST00000354241 BOLA2-SMG1P6H3BVE0 249 aa17.24■□□□□ 0.35
TRIM4-202ENST00000354241 C19orf84I3L1E1 186 aa17.24■□□□□ 0.35
TRIM4-202ENST00000354241 IFNL4K9M1U5 179 aa17.24■□□□□ 0.35
TRIM4-202ENST00000354241 IL5P05113 134 aa17.24■□□□□ 0.35
TRIM4-202ENST00000354241 PRDX2P32119 198 aa17.24■□□□□ 0.35
TRIM4-202ENST00000354241 SRSF7Q16629 238 aaKnown RBP eCLIP17.24■□□□□ 0.35
TRIM4-202ENST00000354241 ZNF497Q6ZNH5 498 aa17.24■□□□□ 0.35
TRIM4-202ENST00000354241 C17orf107Q6ZR85 190 aa17.24■□□□□ 0.35
TRIM4-202ENST00000354241 Q6ZS49 121 aa17.24■□□□□ 0.35
TRIM4-202ENST00000354241 TGIF2LYQ8IUE0 185 aa17.24■□□□□ 0.35
TRIM4-202ENST00000354241 CCDC107Q8WV48 283 aa17.24■□□□□ 0.35
TRIM4-202ENST00000354241 ZNF2Q9BSG1 426 aaPredicted RBP17.24■□□□□ 0.35
TRIM4-202ENST00000354241 TRBV6-6A0A0A6YYG2 114 aa17.23■□□□□ 0.35
TRIM4-202ENST00000354241 SSNA1O43805 119 aa17.23■□□□□ 0.35
TRIM4-202ENST00000354241 GABRA2P47869 451 aa17.23■□□□□ 0.35
TRIM4-202ENST00000354241 C4orf46Q504U0 113 aa17.23■□□□□ 0.35
TRIM4-202ENST00000354241 C5orf24Q7Z6I8 188 aa17.23■□□□□ 0.35
TRIM4-202ENST00000354241 LHFPL1Q86WI0 220 aa17.23■□□□□ 0.35
TRIM4-202ENST00000354241 ASCC1Q8N9N2 400 aaKnown RBP17.23■□□□□ 0.35
TRIM4-202ENST00000354241 OR52B4Q8NGK2 314 aa17.23■□□□□ 0.35
TRIM4-202ENST00000354241 CAPSLQ8WWF8 208 aa17.23■□□□□ 0.35
TRIM4-202ENST00000354241 ZNF69Q9UC07 566 aa17.23■□□□□ 0.35
TRIM4-202ENST00000354241 PKDREJQ9NTG1 2253 aa17.23■□□□□ 0.35
TRIM4-202ENST00000354241 SPTBN1Q01082 2364 aaKnown RBP17.23■□□□□ 0.35
TRIM4-202ENST00000354241 IGKV1D-17A0A075B6S4 117 aa17.23■□□□□ 0.35
TRIM4-202ENST00000354241 KIR2DS1A0A191URI9 304 aa17.23■□□□□ 0.35
TRIM4-202ENST00000354241 TRDCB7Z8K6 153 aa17.23■□□□□ 0.35
TRIM4-202ENST00000354241 H7C1Q1 480 aa17.23■□□□□ 0.35
TRIM4-202ENST00000354241 ZNF205O95201 554 aa17.23■□□□□ 0.35
TRIM4-202ENST00000354241 KIR2DS4P43632 304 aa17.23■□□□□ 0.35
TRIM4-202ENST00000354241 KIR2DS1Q14954 304 aa17.23■□□□□ 0.35
TRIM4-202ENST00000354241 IGSF11Q5DX21 431 aa17.23■□□□□ 0.35
TRIM4-202ENST00000354241 AADACL3Q5VUY0 350 aa17.23■□□□□ 0.35
TRIM4-202ENST00000354241 TMPRSS13Q9BYE2 586 aa17.23■□□□□ 0.35
TRIM4-202ENST00000354241 ARFGEF3Q5TH69 2177 aa17.22■□□□□ 0.35
TRIM4-202ENST00000354241 OR5H14A6NHG9 310 aa17.22■□□□□ 0.35
TRIM4-202ENST00000354241 FABP7O15540 132 aa17.22■□□□□ 0.35
TRIM4-202ENST00000354241 SCTP09683 121 aa17.22■□□□□ 0.35
TRIM4-202ENST00000354241 RCC1P18754 421 aaPredicted RBP17.22■□□□□ 0.35
TRIM4-202ENST00000354241 SNRPD2P62316 118 aaKnown RBP17.22■□□□□ 0.35
TRIM4-202ENST00000354241 SWI5Q1ZZU3 235 aa17.22■□□□□ 0.35
TRIM4-202ENST00000354241 ZNF880Q6PDB4 577 aa17.22■□□□□ 0.35
TRIM4-202ENST00000354241 DCAF16Q9NXF7 216 aa17.22■□□□□ 0.35
TRIM4-202ENST00000354241 TRAPPC2LQ9UL33 140 aa17.22■□□□□ 0.35
TRIM4-202ENST00000354241 RAI1Q7Z5J4 1906 aaPredicted RBP17.21■□□□□ 0.35
TRIM4-202ENST00000354241 TRAV39A0A0B4J263 110 aa17.21■□□□□ 0.35
TRIM4-202ENST00000354241 LRRC30A6NM36 301 aa17.21■□□□□ 0.35
TRIM4-202ENST00000354241 CREBL2O60519 120 aaPredicted RBP17.21■□□□□ 0.35
TRIM4-202ENST00000354241 C1QL1O75973 258 aa17.21■□□□□ 0.35
TRIM4-202ENST00000354241 OR3A1P47881 315 aa17.21■□□□□ 0.35
TRIM4-202ENST00000354241 FCN2Q15485 313 aa17.21■□□□□ 0.35
TRIM4-202ENST00000354241 MED30Q96HR3 178 aa17.21■□□□□ 0.35
TRIM4-202ENST00000354241 ALX4Q9H161 411 aaPredicted RBP17.21■□□□□ 0.35
TRIM4-202ENST00000354241 OR4E1P0C645 316 aa17.21■□□□□ 0.35
TRIM4-202ENST00000354241 FPR2P25090 351 aa17.21■□□□□ 0.35
TRIM4-202ENST00000354241 GLP1RP43220 463 aa17.21■□□□□ 0.35
TRIM4-202ENST00000354241 SEC61A1P61619 476 aaKnown RBP17.21■□□□□ 0.35
TRIM4-202ENST00000354241 CD83Q01151 205 aa17.21■□□□□ 0.35
TRIM4-202ENST00000354241 BAMBIQ13145 260 aa17.21■□□□□ 0.35
TRIM4-202ENST00000354241 ZNF626Q68DY1 528 aa17.21■□□□□ 0.35
TRIM4-202ENST00000354241 FAM222BQ8WU58 562 aa17.21■□□□□ 0.35
TRIM4-202ENST00000354241 SCGB3A2Q96PL1 93 aa17.21■□□□□ 0.35
TRIM4-202ENST00000354241 LIME1Q9H400 295 aa17.21■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms