RNA–Protein interactions for RNA: ENST00000349511.8

UBA3-201, Transcript of ubiquitin like modifier activating enzyme 3, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene UBA3, Length 2,112 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBA3-201ENST00000349511 HOXB5P09067 269 aa11.47□□□□□ -0.57
UBA3-201ENST00000349511 NAT2P11245 290 aa11.47□□□□□ -0.57
UBA3-201ENST00000349511 CBR1P16152 277 aa11.47□□□□□ -0.57
UBA3-201ENST00000349511 SERPINA2P20848 420 aa11.47□□□□□ -0.57
UBA3-201ENST00000349511 TAS2R46P59540 309 aa11.47□□□□□ -0.57
UBA3-201ENST00000349511 EIF2S3LQ2VIR3 472 aaKnown RBP11.47□□□□□ -0.57
UBA3-201ENST00000349511 C1orf162Q8NEQ5 155 aaPredicted RBP11.47□□□□□ -0.57
UBA3-201ENST00000349511 OR10Z1Q8NGY1 313 aa11.47□□□□□ -0.57
UBA3-201ENST00000349511 SLC5A7Q9GZV3 580 aa11.47□□□□□ -0.57
UBA3-201ENST00000349511 TMEM231Q9H6L2 316 aa11.47□□□□□ -0.57
UBA3-201ENST00000349511 ZNF391Q9UJN7 358 aa11.47□□□□□ -0.57
UBA3-201ENST00000349511 DIDO1Q9BTC0 2240 aaKnown RBP11.46□□□□□ -0.57
UBA3-201ENST00000349511 ZNF816-ZNF321PA0A0X1KG74 233 aa11.46□□□□□ -0.57
UBA3-201ENST00000349511 ZNF705EA8MWA4 302 aaPredicted RBP11.46□□□□□ -0.57
UBA3-201ENST00000349511 SMPD2O60906 423 aa11.46□□□□□ -0.57
UBA3-201ENST00000349511 CECR9P0C854 216 aa11.46□□□□□ -0.57
UBA3-201ENST00000349511 OPRM1P35372 400 aa11.46□□□□□ -0.57
UBA3-201ENST00000349511 ALDH3B1P43353 468 aa11.46□□□□□ -0.57
UBA3-201ENST00000349511 ZNF83P51522 516 aa11.46□□□□□ -0.57
UBA3-201ENST00000349511 IL15RAQ13261 267 aa11.46□□□□□ -0.57
UBA3-201ENST00000349511 HAGHLQ6PII5 290 aaPredicted RBP11.46□□□□□ -0.57
UBA3-201ENST00000349511 C10orf35Q96D05 121 aa11.46□□□□□ -0.57
UBA3-201ENST00000349511 TLNRD1Q9H1K6 362 aa11.46□□□□□ -0.57
UBA3-201ENST00000349511 TREM1Q9NP99 234 aa11.46□□□□□ -0.57
UBA3-201ENST00000349511 GSKIPQ9P0R6 139 aa11.46□□□□□ -0.57
UBA3-201ENST00000349511 NDRG3Q9UGV2 375 aa11.46□□□□□ -0.57
UBA3-201ENST00000349511 FZR1Q9UM11 496 aa11.46□□□□□ -0.57
UBA3-201ENST00000349511 CARHSP1Q9Y2V2 147 aaKnown RBP11.46□□□□□ -0.57
UBA3-201ENST00000349511 PRELID3BQ9Y3B1 194 aa11.46□□□□□ -0.57
UBA3-201ENST00000349511 ICE1Q9Y2F5 2266 aa11.46□□□□□ -0.57
UBA3-201ENST00000349511 ESPL1Q14674 2120 aa11.46□□□□□ -0.58
UBA3-201ENST00000349511 DHRS7CA6NNS2 312 aa11.45□□□□□ -0.58
UBA3-201ENST00000349511 KNG1P01042 644 aa11.45□□□□□ -0.58
UBA3-201ENST00000349511 S100A10P60903 97 aa11.45□□□□□ -0.58
UBA3-201ENST00000349511 PJVKQ0ZLH3 352 aa11.45□□□□□ -0.58
UBA3-201ENST00000349511 CHRFAM7AQ494W8 412 aa11.45□□□□□ -0.58
UBA3-201ENST00000349511 OR1J1Q8NGS3 322 aa11.45□□□□□ -0.58
UBA3-201ENST00000349511 EMG1Q92979 244 aaKnown RBP11.45□□□□□ -0.58
UBA3-201ENST00000349511 BORCS8Q96FH0 119 aa11.45□□□□□ -0.58
UBA3-201ENST00000349511 TM2D1Q9BX74 207 aa11.45□□□□□ -0.58
UBA3-201ENST00000349511 DNAJB11Q9UBS4 358 aa11.45□□□□□ -0.58
UBA3-201ENST00000349511 SLC25A15Q9Y619 301 aa11.45□□□□□ -0.58
UBA3-201ENST00000349511 IGKV1D-8A0A087WSZ0 117 aa11.45□□□□□ -0.58
UBA3-201ENST00000349511 IGHV1-18A0A0C4DH31 117 aa11.45□□□□□ -0.58
UBA3-201ENST00000349511 CD300LBA8K4G0 201 aa11.45□□□□□ -0.58
UBA3-201ENST00000349511 M0R1B8 84 aa11.45□□□□□ -0.58
UBA3-201ENST00000349511 MSTNO14793 375 aa11.45□□□□□ -0.58
UBA3-201ENST00000349511 F12P00748 615 aaPredicted RBP11.45□□□□□ -0.58
UBA3-201ENST00000349511 SFTPBP07988 381 aa11.45□□□□□ -0.58
UBA3-201ENST00000349511 TMEM225BP0DP42 221 aa11.45□□□□□ -0.58
UBA3-201ENST00000349511 UCP2P55851 309 aa11.45□□□□□ -0.58
UBA3-201ENST00000349511 PPP1CBP62140 327 aa11.45□□□□□ -0.58
UBA3-201ENST00000349511 MRPL49Q13405 166 aaKnown RBP11.45□□□□□ -0.58
UBA3-201ENST00000349511 ALKBH6Q3KRA9 238 aa11.45□□□□□ -0.58
UBA3-201ENST00000349511 TMEM42Q69YG0 159 aa11.45□□□□□ -0.58
UBA3-201ENST00000349511 PCSK4Q6UW60 755 aa11.45□□□□□ -0.58
UBA3-201ENST00000349511 IL34Q6ZMJ4 242 aa11.45□□□□□ -0.58
UBA3-201ENST00000349511 CBLN2Q8IUK8 224 aa11.45□□□□□ -0.58
UBA3-201ENST00000349511 CCDC54Q8NEL0 328 aa11.45□□□□□ -0.58
UBA3-201ENST00000349511 SLC25A40Q8TBP6 338 aa11.45□□□□□ -0.58
UBA3-201ENST00000349511 HRH4Q9H3N8 390 aa11.45□□□□□ -0.58
UBA3-201ENST00000349511 SAV1Q9H4B6 383 aaPredicted RBP11.45□□□□□ -0.58
UBA3-201ENST00000349511 LPAR3Q9UBY5 353 aa11.45□□□□□ -0.58
UBA3-201ENST00000349511 CACNA1BQ00975 2339 aa11.44□□□□□ -0.58
UBA3-201ENST00000349511 SERPINE3A8MV23 424 aa11.44□□□□□ -0.58
UBA3-201ENST00000349511 H7C2Y5 167 aa11.44□□□□□ -0.58
UBA3-201ENST00000349511 PET100P0DJ07 73 aa11.44□□□□□ -0.58
UBA3-201ENST00000349511 HOXB1P14653 301 aaPredicted RBP11.44□□□□□ -0.58
UBA3-201ENST00000349511 PRDX4Q13162 271 aa11.44□□□□□ -0.58
UBA3-201ENST00000349511 CNN3Q15417 329 aaKnown RBP11.44□□□□□ -0.58
UBA3-201ENST00000349511 HFEQ30201 348 aa11.44□□□□□ -0.58
UBA3-201ENST00000349511 DHRS7BQ6IAN0 325 aaPredicted RBP11.44□□□□□ -0.58
UBA3-201ENST00000349511 OR5L1Q8NGL2 311 aa11.44□□□□□ -0.58
UBA3-201ENST00000349511 S100A13Q99584 98 aa11.44□□□□□ -0.58
UBA3-201ENST00000349511 ZNF701Q9NV72 531 aaPredicted RBP11.44□□□□□ -0.58
UBA3-201ENST00000349511 UQCC1Q9NVA1 299 aa11.44□□□□□ -0.58
UBA3-201ENST00000349511 C14orf166Q9Y224 244 aaKnown RBP11.44□□□□□ -0.58
UBA3-201ENST00000349511 IGHV3-64DA0A0J9YX35 117 aa11.44□□□□□ -0.58
UBA3-201ENST00000349511 ATXN7O15265 892 aaPredicted RBP11.44□□□□□ -0.58
UBA3-201ENST00000349511 HKR1P10072 659 aa11.44□□□□□ -0.58
UBA3-201ENST00000349511 RBP2P50120 134 aa11.44□□□□□ -0.58
UBA3-201ENST00000349511 GPM6AP51674 278 aa11.44□□□□□ -0.58
UBA3-201ENST00000349511 SURF2Q15527 256 aaPredicted RBP11.44□□□□□ -0.58
UBA3-201ENST00000349511 RPL7L1Q6DKI1 246 aaKnown RBP11.44□□□□□ -0.58
UBA3-201ENST00000349511 C6orf201Q7Z4U5 140 aa11.44□□□□□ -0.58
UBA3-201ENST00000349511 FOXRED2Q8IWF2 684 aa11.44□□□□□ -0.58
UBA3-201ENST00000349511 LINC00518Q8N0U6 118 aa11.44□□□□□ -0.58
UBA3-201ENST00000349511 C17orf78Q8N4C9 275 aa11.44□□□□□ -0.58
UBA3-201ENST00000349511 RND1Q92730 232 aa11.44□□□□□ -0.58
UBA3-201ENST00000349511 SMIM8Q96KF7 97 aa11.44□□□□□ -0.58
UBA3-201ENST00000349511 SEC11CQ9BY50 192 aa11.44□□□□□ -0.58
UBA3-201ENST00000349511 SLC7A11Q9UPY5 501 aa11.44□□□□□ -0.58
UBA3-201ENST00000349511 IFNA2P01563 188 aa11.43□□□□□ -0.58
UBA3-201ENST00000349511 PRKACAP17612 351 aa11.43□□□□□ -0.58
UBA3-201ENST00000349511 CA6P23280 308 aa11.43□□□□□ -0.58
UBA3-201ENST00000349511 CPT2P23786 658 aa11.43□□□□□ -0.58
UBA3-201ENST00000349511 GABRR1P24046 479 aa11.43□□□□□ -0.58
UBA3-201ENST00000349511 MPV17P39210 176 aa11.43□□□□□ -0.58
UBA3-201ENST00000349511 NPBWR1P48145 328 aa11.43□□□□□ -0.58
UBA3-201ENST00000349511 RBM39Q14498 530 aaKnown RBP11.43□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms