RNA–Protein interactions for RNA: ENST00000343524.9

ATG4A-201, Transcript of autophagy related 4A cysteine peptidase, humanhuman

TSL 2

Gene ATG4A, Length 1,941 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4A-201ENST00000343524 TMEM238C9JI98 176 aa7.08□□□□□ -1.28
ATG4A-201ENST00000343524 K7ESM1 405 aa7.08□□□□□ -1.28
ATG4A-201ENST00000343524 SLC16A7O60669 478 aa7.08□□□□□ -1.28
ATG4A-201ENST00000343524 RAD51DO75771 328 aa7.08□□□□□ -1.28
ATG4A-201ENST00000343524 OR2J2O76002 312 aa7.08□□□□□ -1.28
ATG4A-201ENST00000343524 IGHMP01871 453 aa7.08□□□□□ -1.28
ATG4A-201ENST00000343524 CXCL10P02778 98 aa7.08□□□□□ -1.28
ATG4A-201ENST00000343524 BGLAPP02818 100 aa7.08□□□□□ -1.28
ATG4A-201ENST00000343524 TNFSF4P23510 183 aa7.08□□□□□ -1.28
ATG4A-201ENST00000343524 MPLP40238 635 aa7.08□□□□□ -1.28
ATG4A-201ENST00000343524 BLKP51451 505 aa7.08□□□□□ -1.28
ATG4A-201ENST00000343524 DCAF7P61962 342 aa7.08□□□□□ -1.28
ATG4A-201ENST00000343524 PPP1CBP62140 327 aa7.08□□□□□ -1.28
ATG4A-201ENST00000343524 SUMO1P63165 101 aaKnown RBP7.08□□□□□ -1.28
ATG4A-201ENST00000343524 NFATC4Q14934 902 aa7.08□□□□□ -1.28
ATG4A-201ENST00000343524 EXOSC7Q15024 291 aaKnown RBP7.08□□□□□ -1.28
ATG4A-201ENST00000343524 TCEA2Q15560 299 aa7.08□□□□□ -1.28
ATG4A-201ENST00000343524 TCTN1Q2MV58 587 aa7.08□□□□□ -1.28
ATG4A-201ENST00000343524 FBLN7Q53RD9 439 aa7.08□□□□□ -1.28
ATG4A-201ENST00000343524 WDR25Q64LD2 544 aaPredicted RBP7.08□□□□□ -1.28
ATG4A-201ENST00000343524 OR4N5Q8IXE1 308 aa7.08□□□□□ -1.28
ATG4A-201ENST00000343524 OR52R1Q8NGF1 315 aa7.08□□□□□ -1.28
ATG4A-201ENST00000343524 OR5C1Q8NGR4 320 aa7.08□□□□□ -1.28
ATG4A-201ENST00000343524 OR14C36Q8NHC7 312 aa7.08□□□□□ -1.28
ATG4A-201ENST00000343524 ADAMTS18Q8TE60 1221 aa7.08□□□□□ -1.28
ATG4A-201ENST00000343524 PINX1Q96BK5 328 aaKnown RBP7.08□□□□□ -1.28
ATG4A-201ENST00000343524 CCDC3Q9BQI4 270 aa7.08□□□□□ -1.28
ATG4A-201ENST00000343524 VN1R1Q9GZP7 353 aa7.08□□□□□ -1.28
ATG4A-201ENST00000343524 C11orf1Q9H5F2 150 aa7.08□□□□□ -1.28
ATG4A-201ENST00000343524 IGFLR1Q9H665 355 aa7.08□□□□□ -1.28
ATG4A-201ENST00000343524 CHODLQ9H9P2 273 aa7.08□□□□□ -1.28
ATG4A-201ENST00000343524 CALHM2Q9HA72 323 aa7.08□□□□□ -1.28
ATG4A-201ENST00000343524 ZNF701Q9NV72 531 aaPredicted RBP7.08□□□□□ -1.28
ATG4A-201ENST00000343524 MRPL22Q9NWU5 206 aaKnown RBP7.08□□□□□ -1.28
ATG4A-201ENST00000343524 ST3GAL6Q9Y274 331 aa7.08□□□□□ -1.28
ATG4A-201ENST00000343524 LAMTOR2Q9Y2Q5 125 aa7.08□□□□□ -1.28
ATG4A-201ENST00000343524 PAM16Q9Y3D7 125 aa7.08□□□□□ -1.28
ATG4A-201ENST00000343524 TRAPPC1Q9Y5R8 145 aa7.08□□□□□ -1.28
ATG4A-201ENST00000343524 HEBP2Q9Y5Z4 205 aa7.08□□□□□ -1.28
ATG4A-201ENST00000343524 IGSF23A1L1A6 192 aa7.07□□□□□ -1.28
ATG4A-201ENST00000343524 ANKUB1A6NFN9 424 aa7.07□□□□□ -1.28
ATG4A-201ENST00000343524 CEBPZOSA8MTT3 80 aa7.07□□□□□ -1.28
ATG4A-201ENST00000343524 TIAF1O95411 115 aa7.07□□□□□ -1.28
ATG4A-201ENST00000343524 SMIM10L1P0DMW3 83 aa7.07□□□□□ -1.28
ATG4A-201ENST00000343524 APOBEC3AP31941 199 aaPredicted RBP7.07□□□□□ -1.28
ATG4A-201ENST00000343524 ARR3P36575 388 aa7.07□□□□□ -1.28
ATG4A-201ENST00000343524 SLC6A8P48029 635 aa7.07□□□□□ -1.28
ATG4A-201ENST00000343524 TFPI2P48307 235 aa7.07□□□□□ -1.28
ATG4A-201ENST00000343524 SGCBQ16585 318 aa7.07□□□□□ -1.28
ATG4A-201ENST00000343524 CPEB4Q17RY0 729 aaKnown RBP eCLIP7.07□□□□□ -1.28
ATG4A-201ENST00000343524 TMEM52BQ4KMG9 183 aa7.07□□□□□ -1.28
ATG4A-201ENST00000343524 D2HGDHQ8N465 521 aa7.07□□□□□ -1.28
ATG4A-201ENST00000343524 TMEM252Q8N6L7 170 aa7.07□□□□□ -1.28
ATG4A-201ENST00000343524 SUMF1Q8NBK3 374 aa7.07□□□□□ -1.28
ATG4A-201ENST00000343524 OR2M7Q8NG81 312 aa7.07□□□□□ -1.28
ATG4A-201ENST00000343524 OR5AU1Q8NGC0 362 aa7.07□□□□□ -1.28
ATG4A-201ENST00000343524 OR51T1Q8NGJ9 327 aa7.07□□□□□ -1.28
ATG4A-201ENST00000343524 OR5B3Q8NH48 314 aa7.07□□□□□ -1.28
ATG4A-201ENST00000343524 ZNF519Q8TB69 540 aa7.07□□□□□ -1.28
ATG4A-201ENST00000343524 DAZLQ92904 295 aaKnown RBP7.07□□□□□ -1.28
ATG4A-201ENST00000343524 FGF14Q92915 247 aa7.07□□□□□ -1.28
ATG4A-201ENST00000343524 TNFRSF14Q92956 283 aa7.07□□□□□ -1.28
ATG4A-201ENST00000343524 NUDT11Q96G61 164 aa7.07□□□□□ -1.28
ATG4A-201ENST00000343524 SCARF2Q96GP6 870 aaPredicted RBP7.07□□□□□ -1.28
ATG4A-201ENST00000343524 WDYHV1Q96HA8 205 aa7.07□□□□□ -1.28
ATG4A-201ENST00000343524 SMIM10Q96HG1 83 aa7.07□□□□□ -1.28
ATG4A-201ENST00000343524 TXN2Q99757 166 aa7.07□□□□□ -1.28
ATG4A-201ENST00000343524 TIMM29Q9BSF4 260 aa7.07□□□□□ -1.28
ATG4A-201ENST00000343524 ZBP1Q9H171 429 aa7.07□□□□□ -1.28
ATG4A-201ENST00000343524 SLC35D1Q9NTN3 355 aa7.07□□□□□ -1.28
ATG4A-201ENST00000343524 ZNF586Q9NXT0 402 aa7.07□□□□□ -1.28
ATG4A-201ENST00000343524 MRPS2Q9Y399 296 aaKnown RBP7.07□□□□□ -1.28
ATG4A-201ENST00000343524 EML5Q05BV3 1969 aa7.07□□□□□ -1.28
ATG4A-201ENST00000343524 TRAV9-1A0A075B6T8 112 aa7.07□□□□□ -1.28
ATG4A-201ENST00000343524 TRAV36DV7A0A075B6V5 113 aa7.07□□□□□ -1.28
ATG4A-201ENST00000343524 AQP7O14520 342 aa7.07□□□□□ -1.28
ATG4A-201ENST00000343524 FGF17O60258 216 aa7.07□□□□□ -1.28
ATG4A-201ENST00000343524 TOX4O94842 621 aa7.07□□□□□ -1.28
ATG4A-201ENST00000343524 SLC35E2P0CK97 266 aa7.07□□□□□ -1.28
ATG4A-201ENST00000343524 CEBPBP17676 345 aa7.07□□□□□ -1.28
ATG4A-201ENST00000343524 MSR1P21757 451 aa7.07□□□□□ -1.28
ATG4A-201ENST00000343524 UCP3P55916 312 aa7.07□□□□□ -1.28
ATG4A-201ENST00000343524 TMEM50BP56557 158 aa7.07□□□□□ -1.28
ATG4A-201ENST00000343524 RPL23P62829 140 aaKnown RBP7.07□□□□□ -1.28
ATG4A-201ENST00000343524 GNB2P62879 340 aa7.07□□□□□ -1.28
ATG4A-201ENST00000343524 SERF2P84101 59 aa7.07□□□□□ -1.28
ATG4A-201ENST00000343524 FAM53BQ14153 422 aa7.07□□□□□ -1.28
ATG4A-201ENST00000343524 PRSS8Q16651 343 aa7.07□□□□□ -1.28
ATG4A-201ENST00000343524 CBLN3Q6UW01 205 aa7.07□□□□□ -1.28
ATG4A-201ENST00000343524 LYZL2Q7Z4W2 148 aa7.07□□□□□ -1.28
ATG4A-201ENST00000343524 VN1R4Q7Z5H5 301 aa7.07□□□□□ -1.28
ATG4A-201ENST00000343524 RTN4RL1Q86UN2 441 aaPredicted RBP7.07□□□□□ -1.28
ATG4A-201ENST00000343524 C20orf196Q8IYI0 205 aa7.07□□□□□ -1.28
ATG4A-201ENST00000343524 PNKDQ8N490 385 aa7.07□□□□□ -1.28
ATG4A-201ENST00000343524 TCTEX1D1Q8N7M0 179 aa7.07□□□□□ -1.28
ATG4A-201ENST00000343524 SLC38A9Q8NBW4 561 aa7.07□□□□□ -1.28
ATG4A-201ENST00000343524 NECAP1Q8NC96 275 aa7.07□□□□□ -1.28
ATG4A-201ENST00000343524 OR52M1Q8NGK5 317 aa7.07□□□□□ -1.28
ATG4A-201ENST00000343524 OR1L6Q8NGR2 347 aa7.07□□□□□ -1.28
ATG4A-201ENST00000343524 IL22RA2Q969J5 263 aa7.07□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 48 ms