RNA–Protein interactions for RNA: ENST00000343060.4

HOXA1-201, Transcript of homeobox A1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXA1, Length 2,517 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA1-201ENST00000343060 IL22RA2Q969J5 263 aa8.35□□□□□ -1.07
HOXA1-201ENST00000343060 NABP1Q96AH0 204 aa8.35□□□□□ -1.07
HOXA1-201ENST00000343060 R3HDM4Q96D70 268 aa8.35□□□□□ -1.07
HOXA1-201ENST00000343060 GPR173Q9NS66 373 aa8.35□□□□□ -1.07
HOXA1-201ENST00000343060 FER1L5A0AVI2 2057 aa8.35□□□□□ -1.07
HOXA1-201ENST00000343060 TDRD6O60522 2096 aaKnown RBP8.35□□□□□ -1.07
HOXA1-201ENST00000343060 ANGPTL7O43827 346 aa8.34□□□□□ -1.07
HOXA1-201ENST00000343060 SFTPCP11686 197 aa8.34□□□□□ -1.07
HOXA1-201ENST00000343060 RAB4AP20338 218 aa8.34□□□□□ -1.07
HOXA1-201ENST00000343060 GNRHRP30968 328 aa8.34□□□□□ -1.07
HOXA1-201ENST00000343060 CTHP32929 405 aa8.34□□□□□ -1.07
HOXA1-201ENST00000343060 ZNF41P51814 821 aaPredicted RBP8.34□□□□□ -1.07
HOXA1-201ENST00000343060 CDCP2Q5VXM1 449 aa8.34□□□□□ -1.07
HOXA1-201ENST00000343060 WDR25Q64LD2 544 aaPredicted RBP8.34□□□□□ -1.07
HOXA1-201ENST00000343060 ZNF787Q6DD87 383 aa8.34□□□□□ -1.07
HOXA1-201ENST00000343060 C16orf47Q6ZP98 133 aaPredicted RBP8.34□□□□□ -1.07
HOXA1-201ENST00000343060 LANCL3Q6ZV70 420 aa8.34□□□□□ -1.07
HOXA1-201ENST00000343060 P4HA3Q7Z4N8 544 aa8.34□□□□□ -1.07
HOXA1-201ENST00000343060 TBC1D26Q86UD7 250 aa8.34□□□□□ -1.07
HOXA1-201ENST00000343060 TMEM123Q8N131 208 aa8.34□□□□□ -1.07
HOXA1-201ENST00000343060 TMEM170AQ8WVE7 144 aa8.34□□□□□ -1.07
HOXA1-201ENST00000343060 ZNF665Q9H7R5 613 aa8.34□□□□□ -1.07
HOXA1-201ENST00000343060 F5H5K5 113 aa8.34□□□□□ -1.07
HOXA1-201ENST00000343060 M0R135 149 aa8.34□□□□□ -1.07
HOXA1-201ENST00000343060 SPRY1O43609 319 aaPredicted RBP8.34□□□□□ -1.07
HOXA1-201ENST00000343060 PDCD6O75340 191 aa8.34□□□□□ -1.07
HOXA1-201ENST00000343060 GABRG2P18507 467 aa8.34□□□□□ -1.07
HOXA1-201ENST00000343060 VDAC1P21796 283 aa8.34□□□□□ -1.07
HOXA1-201ENST00000343060 PTGDSP41222 190 aa8.34□□□□□ -1.07
HOXA1-201ENST00000343060 CASP6P55212 293 aa8.34□□□□□ -1.07
HOXA1-201ENST00000343060 MRPS21P82921 87 aaKnown RBP8.34□□□□□ -1.07
HOXA1-201ENST00000343060 ZNF154Q13106 437 aa8.34□□□□□ -1.07
HOXA1-201ENST00000343060 CNN3Q15417 329 aaKnown RBP8.34□□□□□ -1.07
HOXA1-201ENST00000343060 ZNF726P1Q15940 193 aa8.34□□□□□ -1.07
HOXA1-201ENST00000343060 KIAA0895LQ68EN5 471 aa8.34□□□□□ -1.07
HOXA1-201ENST00000343060 TMEM42Q69YG0 159 aa8.34□□□□□ -1.07
HOXA1-201ENST00000343060 ZNF880Q6PDB4 577 aa8.34□□□□□ -1.07
HOXA1-201ENST00000343060 CYP2G1PQ6ZSU1 146 aa8.34□□□□□ -1.07
HOXA1-201ENST00000343060 LHFPL2Q6ZUX7 228 aa8.34□□□□□ -1.07
HOXA1-201ENST00000343060 MRPL52Q86TS9 123 aaKnown RBP8.34□□□□□ -1.07
HOXA1-201ENST00000343060 C17orf82Q86X59 251 aaPredicted RBP8.34□□□□□ -1.07
HOXA1-201ENST00000343060 ZNF695Q8IW36 515 aa8.34□□□□□ -1.07
HOXA1-201ENST00000343060 ZNF295-AS1Q8N0V1 137 aa8.34□□□□□ -1.07
HOXA1-201ENST00000343060 TMEM54Q969K7 222 aa8.34□□□□□ -1.07
HOXA1-201ENST00000343060 ZNF799Q96GE5 643 aa8.34□□□□□ -1.07
HOXA1-201ENST00000343060 POM121Q96HA1 1249 aa8.34□□□□□ -1.07
HOXA1-201ENST00000343060 PSMG3Q9BT73 122 aaPredicted RBP8.34□□□□□ -1.07
HOXA1-201ENST00000343060 SNHG12Q9BXW3 62 aa8.34□□□□□ -1.07
HOXA1-201ENST00000343060 MAGT1Q9H0U3 335 aa8.34□□□□□ -1.07
HOXA1-201ENST00000343060 RNF150Q9ULK6 438 aa8.34□□□□□ -1.07
HOXA1-201ENST00000343060 PCDH15Q96QU1 1955 aa8.34□□□□□ -1.08
HOXA1-201ENST00000343060 SEC16AO15027 2179 aa8.33□□□□□ -1.08
HOXA1-201ENST00000343060 IGKV1-12A0A0C4DH73 117 aa8.33□□□□□ -1.08
HOXA1-201ENST00000343060 KIR2DL5BA0A0G2JN68 375 aa8.33□□□□□ -1.08
HOXA1-201ENST00000343060 KIR2DL5BA0A0G2JPC4 375 aa8.33□□□□□ -1.08
HOXA1-201ENST00000343060 TLX3O43711 291 aaPredicted RBP8.33□□□□□ -1.08
HOXA1-201ENST00000343060 CYTIPO60759 359 aa8.33□□□□□ -1.08
HOXA1-201ENST00000343060 IGKV1D-12P01611 117 aa8.33□□□□□ -1.08
HOXA1-201ENST00000343060 SRSF7Q16629 238 aaKnown RBP eCLIP8.33□□□□□ -1.08
HOXA1-201ENST00000343060 MRGPRGQ86SM5 289 aa8.33□□□□□ -1.08
HOXA1-201ENST00000343060 C20orf196Q8IYI0 205 aa8.33□□□□□ -1.08
HOXA1-201ENST00000343060 KIR2DL5AQ8N109 375 aa8.33□□□□□ -1.08
HOXA1-201ENST00000343060 OSR2Q8N2R0 312 aa8.33□□□□□ -1.08
HOXA1-201ENST00000343060 NFAM1Q8NET5 270 aaPredicted RBP8.33□□□□□ -1.08
HOXA1-201ENST00000343060 OR1L3Q8NH93 324 aa8.33□□□□□ -1.08
HOXA1-201ENST00000343060 HIST1H2AAQ96QV6 131 aa8.33□□□□□ -1.08
HOXA1-201ENST00000343060 REPIN1Q9BWE0 567 aaKnown RBP8.33□□□□□ -1.08
HOXA1-201ENST00000343060 RPRMQ9NS64 109 aa8.33□□□□□ -1.08
HOXA1-201ENST00000343060 NAT8Q9UHE5 227 aa8.33□□□□□ -1.08
HOXA1-201ENST00000343060 UBE2J1Q9Y385 318 aaPredicted RBP8.33□□□□□ -1.08
HOXA1-201ENST00000343060 A0A1W2PNR3 127 aa8.33□□□□□ -1.08
HOXA1-201ENST00000343060 XKRY2A2RUG3 117 aa8.33□□□□□ -1.08
HOXA1-201ENST00000343060 MDKP21741 143 aaPredicted RBP8.33□□□□□ -1.08
HOXA1-201ENST00000343060 CRYGSP22914 178 aa8.33□□□□□ -1.08
HOXA1-201ENST00000343060 CCKARP32238 428 aa8.33□□□□□ -1.08
HOXA1-201ENST00000343060 PRDX4Q13162 271 aa8.33□□□□□ -1.08
HOXA1-201ENST00000343060 DAZAP2Q15038 168 aaPredicted RBP8.33□□□□□ -1.08
HOXA1-201ENST00000343060 MPV17LQ2QL34 196 aa8.33□□□□□ -1.08
HOXA1-201ENST00000343060 SNAI3Q3KNW1 292 aa8.33□□□□□ -1.08
HOXA1-201ENST00000343060 PIGYQ3MUY2 71 aa8.33□□□□□ -1.08
HOXA1-201ENST00000343060 TMEM217Q8N7C4 229 aa8.33□□□□□ -1.08
HOXA1-201ENST00000343060 OR51G1Q8NGK1 321 aa8.33□□□□□ -1.08
HOXA1-201ENST00000343060 TAAR3PQ9P1P4 343 aa8.33□□□□□ -1.08
HOXA1-201ENST00000343060 LRFN1Q9P244 771 aa8.33□□□□□ -1.08
HOXA1-201ENST00000343060 ZFP92A6NM28 416 aa8.32□□□□□ -1.08
HOXA1-201ENST00000343060 PPP5D1E7EU14 171 aa8.32□□□□□ -1.08
HOXA1-201ENST00000343060 CHST1O43916 411 aa8.32□□□□□ -1.08
HOXA1-201ENST00000343060 IFNA5P01569 189 aa8.32□□□□□ -1.08
HOXA1-201ENST00000343060 IGLV3-19P01714 112 aa8.32□□□□□ -1.08
HOXA1-201ENST00000343060 TYMSP04818 313 aa8.32□□□□□ -1.08
HOXA1-201ENST00000343060 SLC25A6P12236 298 aa8.32□□□□□ -1.08
HOXA1-201ENST00000343060 FAM3BP58499 235 aaPredicted RBP8.32□□□□□ -1.08
HOXA1-201ENST00000343060 CLN3Q13286 438 aa8.32□□□□□ -1.08
HOXA1-201ENST00000343060 P2RY6Q15077 328 aa8.32□□□□□ -1.08
HOXA1-201ENST00000343060 SHBQ15464 509 aa8.32□□□□□ -1.08
HOXA1-201ENST00000343060 IQCJQ1A5X6 159 aa8.32□□□□□ -1.08
HOXA1-201ENST00000343060 ACTL10Q5JWF8 245 aa8.32□□□□□ -1.08
HOXA1-201ENST00000343060 C16orf82Q7Z2V1 217 aa8.32□□□□□ -1.08
HOXA1-201ENST00000343060 WDR5BQ86VZ2 330 aa8.32□□□□□ -1.08
HOXA1-201ENST00000343060 THNSL2Q86YJ6 484 aa8.32□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 103.8 ms