RNA–Protein interactions for RNA: ENST00000338368.7

PRKDC-202, Transcript of protein kinase, DNA-activated, catalytic subunit, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PRKDC, Length 12,784 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDC-202ENST00000338368 TAS2R30P59541 319 aa5.46□□□□□ -1.53
PRKDC-202ENST00000338368 POLR2GP62487 172 aaKnown RBP eCLIP5.46□□□□□ -1.53
PRKDC-202ENST00000338368 NUP210LQ5VU65 1888 aa5.46□□□□□ -1.53
PRKDC-202ENST00000338368 OR10AD1Q8NGE0 317 aa5.46□□□□□ -1.53
PRKDC-202ENST00000338368 IAPPP10997 89 aa5.46□□□□□ -1.54
PRKDC-202ENST00000338368 LCN15Q6UWW0 184 aa5.46□□□□□ -1.54
PRKDC-202ENST00000338368 IL13RA2Q14627 380 aa5.46□□□□□ -1.54
PRKDC-202ENST00000338368 CEACAM21Q3KPI0 293 aa5.46□□□□□ -1.54
PRKDC-202ENST00000338368 ZNF385CQ66K41 422 aaPredicted RBP5.46□□□□□ -1.54
PRKDC-202ENST00000338368 SLC35G3Q8N808 338 aa5.46□□□□□ -1.54
PRKDC-202ENST00000338368 DYRK2Q92630 601 aa5.46□□□□□ -1.54
PRKDC-202ENST00000338368 PHYHIPLQ96FC7 376 aa5.46□□□□□ -1.54
PRKDC-202ENST00000338368 PFDN5Q99471 154 aa5.46□□□□□ -1.54
PRKDC-202ENST00000338368 ZNF71Q9NQZ8 489 aaPredicted RBP5.46□□□□□ -1.54
PRKDC-202ENST00000338368 SLC2A9Q9NRM0 540 aa5.46□□□□□ -1.54
PRKDC-202ENST00000338368 LAMP3Q9UQV4 416 aa5.46□□□□□ -1.54
PRKDC-202ENST00000338368 AMDHD2Q9Y303 409 aa5.46□□□□□ -1.54
PRKDC-202ENST00000338368 UCP2P55851 309 aa5.46□□□□□ -1.54
PRKDC-202ENST00000338368 CSRP2Q16527 193 aa5.46□□□□□ -1.54
PRKDC-202ENST00000338368 ALKBH6Q3KRA9 238 aa5.46□□□□□ -1.54
PRKDC-202ENST00000338368 ZNF528Q3MIS6 628 aa5.46□□□□□ -1.54
PRKDC-202ENST00000338368 SEZ6L2Q6UXD5 910 aa5.46□□□□□ -1.54
PRKDC-202ENST00000338368 THNSL2Q86YJ6 484 aa5.46□□□□□ -1.54
PRKDC-202ENST00000338368 GCM1Q9NP62 436 aa5.46□□□□□ -1.54
PRKDC-202ENST00000338368 VSIG4Q9Y279 399 aa5.46□□□□□ -1.54
PRKDC-202ENST00000338368 FREM1Q5H8C1 2179 aa5.46□□□□□ -1.54
PRKDC-202ENST00000338368 RPS10-NUDT3A0A1W2PQS6 291 aa5.46□□□□□ -1.54
PRKDC-202ENST00000338368 OR13C7P0DN81 318 aa5.46□□□□□ -1.54
PRKDC-202ENST00000338368 RPS10P46783 165 aaKnown RBP5.46□□□□□ -1.54
PRKDC-202ENST00000338368 PJVKQ0ZLH3 352 aa5.46□□□□□ -1.54
PRKDC-202ENST00000338368 TMEM108Q6UXF1 575 aa5.46□□□□□ -1.54
PRKDC-202ENST00000338368 C1QL2Q7Z5L3 287 aa5.46□□□□□ -1.54
PRKDC-202ENST00000338368 TMEM68Q96MH6 324 aa5.46□□□□□ -1.54
PRKDC-202ENST00000338368 ADAM10O14672 748 aa5.46□□□□□ -1.54
PRKDC-202ENST00000338368 MPPED1O15442 326 aa5.46□□□□□ -1.54
PRKDC-202ENST00000338368 SSSCA1O60232 199 aa5.46□□□□□ -1.54
PRKDC-202ENST00000338368 CYTIPO60759 359 aa5.46□□□□□ -1.54
PRKDC-202ENST00000338368 RRASP10301 218 aa5.46□□□□□ -1.54
PRKDC-202ENST00000338368 RAB11AP62491 216 aa5.46□□□□□ -1.54
PRKDC-202ENST00000338368 UNC119Q13432 240 aa5.46□□□□□ -1.54
PRKDC-202ENST00000338368 Q5BKY6 102 aa5.46□□□□□ -1.54
PRKDC-202ENST00000338368 ZNF703Q9H7S9 590 aaPredicted RBP5.46□□□□□ -1.54
PRKDC-202ENST00000338368 DHRS7CA6NNS2 312 aa5.46□□□□□ -1.54
PRKDC-202ENST00000338368 ONECUT2O95948 504 aa5.46□□□□□ -1.54
PRKDC-202ENST00000338368 APOA2P02652 100 aa5.46□□□□□ -1.54
PRKDC-202ENST00000338368 UBE2KP61086 200 aa5.46□□□□□ -1.54
PRKDC-202ENST00000338368 FAM3AP98173 230 aa5.46□□□□□ -1.54
PRKDC-202ENST00000338368 OVCH2Q7RTZ1 564 aa5.46□□□□□ -1.54
PRKDC-202ENST00000338368 LYZL2Q7Z4W2 148 aa5.46□□□□□ -1.54
PRKDC-202ENST00000338368 RHOFQ9HBH0 211 aa5.46□□□□□ -1.54
PRKDC-202ENST00000338368 BIN3Q9NQY0 253 aa5.46□□□□□ -1.54
PRKDC-202ENST00000338368 GAPTQ8N292 157 aa5.46□□□□□ -1.54
PRKDC-202ENST00000338368 OR2C3Q8N628 320 aa5.46□□□□□ -1.54
PRKDC-202ENST00000338368 CD74P04233 296 aa5.46□□□□□ -1.54
PRKDC-202ENST00000338368 CXCL2P19875 107 aa5.46□□□□□ -1.54
PRKDC-202ENST00000338368 GPR12P47775 334 aa5.46□□□□□ -1.54
PRKDC-202ENST00000338368 ASCL1P50553 236 aa5.46□□□□□ -1.54
PRKDC-202ENST00000338368 NMES1Q9C002 83 aa5.46□□□□□ -1.54
PRKDC-202ENST00000338368 TRAV39A0A0B4J263 110 aa5.45□□□□□ -1.54
PRKDC-202ENST00000338368 LINC00862A6NCI5 91 aa5.45□□□□□ -1.54
PRKDC-202ENST00000338368 ENSAO43768 121 aaKnown RBP5.45□□□□□ -1.54
PRKDC-202ENST00000338368 SUCLG1P53597 346 aaKnown RBP5.45□□□□□ -1.54
PRKDC-202ENST00000338368 FGF12P61328 243 aa5.45□□□□□ -1.54
PRKDC-202ENST00000338368 LOC390937A0A1W2PQ73 354 aa5.45□□□□□ -1.54
PRKDC-202ENST00000338368 ADAM20O43506 726 aa5.45□□□□□ -1.54
PRKDC-202ENST00000338368 GFI1Q99684 422 aa5.45□□□□□ -1.54
PRKDC-202ENST00000338368 HSF4Q9ULV5 492 aa5.45□□□□□ -1.54
PRKDC-202ENST00000338368 LEUTXA8MZ59 168 aa5.45□□□□□ -1.54
PRKDC-202ENST00000338368 LY86O95711 162 aa5.45□□□□□ -1.54
PRKDC-202ENST00000338368 CD59P13987 128 aa5.45□□□□□ -1.54
PRKDC-202ENST00000338368 ZFP62Q8NB50 900 aaPredicted RBP5.45□□□□□ -1.54
PRKDC-202ENST00000338368 NIPSNAP3BQ9BS92 247 aa5.45□□□□□ -1.54
PRKDC-202ENST00000338368 FBXL17Q9UF56 701 aa5.45□□□□□ -1.54
PRKDC-202ENST00000338368 SLC25A4P12235 298 aa5.45□□□□□ -1.54
PRKDC-202ENST00000338368 TNFRSF1AP19438 455 aa5.45□□□□□ -1.54
PRKDC-202ENST00000338368 ZP1P60852 638 aa5.45□□□□□ -1.54
PRKDC-202ENST00000338368 MRGPRDQ8TDS7 321 aa5.45□□□□□ -1.54
PRKDC-202ENST00000338368 ESRP2Q9H6T0 727 aaKnown RBP5.45□□□□□ -1.54
PRKDC-202ENST00000338368 B3GALNT1O75752 331 aa5.45□□□□□ -1.54
PRKDC-202ENST00000338368 MELTFP08582 738 aa5.45□□□□□ -1.54
PRKDC-202ENST00000338368 IGFBP3P17936 291 aaPredicted RBP5.45□□□□□ -1.54
PRKDC-202ENST00000338368 OR4A4PQ8NGN8 299 aa5.45□□□□□ -1.54
PRKDC-202ENST00000338368 TMEM45BQ96B21 275 aa5.45□□□□□ -1.54
PRKDC-202ENST00000338368 CXorf58Q96LI9 332 aa5.45□□□□□ -1.54
PRKDC-202ENST00000338368 C20orf24Q9BUV8 137 aa5.45□□□□□ -1.54
PRKDC-202ENST00000338368 FZR1Q9UM11 496 aa5.45□□□□□ -1.54
PRKDC-202ENST00000338368 DYSFO75923 2080 aa5.45□□□□□ -1.54
PRKDC-202ENST00000338368 A0A0G2JMM0 328 aa5.45□□□□□ -1.54
PRKDC-202ENST00000338368 A0A1W2PPB8 328 aa5.45□□□□□ -1.54
PRKDC-202ENST00000338368 A0A1W2PRS3 328 aa5.45□□□□□ -1.54
PRKDC-202ENST00000338368 FAM90A10PA6NDY2 464 aa5.45□□□□□ -1.54
PRKDC-202ENST00000338368 FAM90A18PA6NE21 464 aa5.45□□□□□ -1.54
PRKDC-202ENST00000338368 FAM90A16PA6NEW6 464 aa5.45□□□□□ -1.54
PRKDC-202ENST00000338368 FAM90A20PA6NIJ5 464 aa5.45□□□□□ -1.54
PRKDC-202ENST00000338368 FAM90A8PA6NJQ4 464 aa5.45□□□□□ -1.54
PRKDC-202ENST00000338368 FAM90A7PA6NKC0 464 aa5.45□□□□□ -1.54
PRKDC-202ENST00000338368 ZFP92A6NM28 416 aa5.45□□□□□ -1.54
PRKDC-202ENST00000338368 FAM90A22PA8MWA6 464 aa5.45□□□□□ -1.54
PRKDC-202ENST00000338368 KIR3DP1A8MWS1 328 aa5.45□□□□□ -1.54
PRKDC-202ENST00000338368 FAM90A12PA8MX19 464 aa5.45□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms