RNA–Protein interactions for RNA: ENST00000335725.8

TDP1-201, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TDP1, Length 3,702 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-201ENST00000335725 IL13RA2Q14627 380 aa7.5□□□□□ -1.21
TDP1-201ENST00000335725 FBXL22Q6P050 247 aa7.5□□□□□ -1.21
TDP1-201ENST00000335725 OR5P2Q8WZ92 322 aa7.5□□□□□ -1.21
TDP1-201ENST00000335725 RERGQ96A58 199 aaPredicted RBP7.5□□□□□ -1.21
TDP1-201ENST00000335725 WFDC6Q9BQY6 131 aa7.5□□□□□ -1.21
TDP1-201ENST00000335725 TTTY10Q9BZA0 68 aa7.5□□□□□ -1.21
TDP1-201ENST00000335725 C5AR2Q9P296 337 aa7.5□□□□□ -1.21
TDP1-201ENST00000335725 MCM3APO60318 1980 aa7.5□□□□□ -1.21
TDP1-201ENST00000335725 NSG1A0A0A6YYJ2 146 aa7.5□□□□□ -1.21
TDP1-201ENST00000335725 A6NDN8 102 aa7.5□□□□□ -1.21
TDP1-201ENST00000335725 CEACAM18A8MTB9 384 aa7.5□□□□□ -1.21
TDP1-201ENST00000335725 FBLP22087 321 aaKnown RBP7.5□□□□□ -1.21
TDP1-201ENST00000335725 ZNF93P35789 620 aaPredicted RBP7.5□□□□□ -1.21
TDP1-201ENST00000335725 MDH2P40926 338 aaKnown RBP7.5□□□□□ -1.21
TDP1-201ENST00000335725 SGSHP51688 502 aa7.5□□□□□ -1.21
TDP1-201ENST00000335725 SP4Q02446 784 aa7.5□□□□□ -1.21
TDP1-201ENST00000335725 ACKR1Q16570 336 aa7.5□□□□□ -1.21
TDP1-201ENST00000335725 ZG16BQ96DA0 208 aa7.5□□□□□ -1.21
TDP1-201ENST00000335725 NRN1Q9NPD7 142 aa7.5□□□□□ -1.21
TDP1-201ENST00000335725 SPAARA0A1B0GVQ0 90 aa7.5□□□□□ -1.21
TDP1-201ENST00000335725 SNAI2O43623 268 aa7.5□□□□□ -1.21
TDP1-201ENST00000335725 NRASP01111 189 aa7.5□□□□□ -1.21
TDP1-201ENST00000335725 KRASP01116 189 aa7.5□□□□□ -1.21
TDP1-201ENST00000335725 IL3RAP26951 378 aa7.5□□□□□ -1.21
TDP1-201ENST00000335725 AOAHP28039 575 aa7.5□□□□□ -1.21
TDP1-201ENST00000335725 YPEL3P61236 119 aaPredicted RBP7.5□□□□□ -1.21
TDP1-201ENST00000335725 SEC11AP67812 179 aa7.5□□□□□ -1.21
TDP1-201ENST00000335725 ARF1P84077 181 aaKnown RBP7.5□□□□□ -1.21
TDP1-201ENST00000335725 GCSAMLQ5JQS6 135 aa7.5□□□□□ -1.21
TDP1-201ENST00000335725 SP5Q6BEB4 398 aaPredicted RBP7.5□□□□□ -1.21
TDP1-201ENST00000335725 C6orf15Q6UXA7 325 aaPredicted RBP7.5□□□□□ -1.21
TDP1-201ENST00000335725 MOB1BQ7L9L4 216 aa7.5□□□□□ -1.21
TDP1-201ENST00000335725 GLYATL1Q969I3 302 aa7.5□□□□□ -1.21
TDP1-201ENST00000335725 KXD1Q9BQD3 176 aa7.5□□□□□ -1.21
TDP1-201ENST00000335725 TMEM121BQ9BXQ6 578 aaPredicted RBP7.5□□□□□ -1.21
TDP1-201ENST00000335725 BCL2L10Q9HD36 194 aa7.5□□□□□ -1.21
TDP1-201ENST00000335725 LHX3Q9UBR4 397 aa7.5□□□□□ -1.21
TDP1-201ENST00000335725 HEATR5AQ86XA9 2040 aa7.5□□□□□ -1.21
TDP1-201ENST00000335725 WIPF1O43516 503 aa7.49□□□□□ -1.21
TDP1-201ENST00000335725 ZNF217O75362 1048 aa7.49□□□□□ -1.21
TDP1-201ENST00000335725 KBTBD11O94819 623 aa7.49□□□□□ -1.21
TDP1-201ENST00000335725 SLC25A14O95258 325 aaPredicted RBP7.49□□□□□ -1.21
TDP1-201ENST00000335725 CD22P20273 847 aa7.49□□□□□ -1.21
TDP1-201ENST00000335725 ZNF117Q03924 483 aa7.49□□□□□ -1.21
TDP1-201ENST00000335725 CPEB4Q17RY0 729 aaKnown RBP eCLIP7.49□□□□□ -1.21
TDP1-201ENST00000335725 MS4A13Q5J8X5 152 aa7.49□□□□□ -1.21
TDP1-201ENST00000335725 FCRL6Q6DN72 434 aa7.49□□□□□ -1.21
TDP1-201ENST00000335725 LCN10Q6JVE6 187 aa7.49□□□□□ -1.21
TDP1-201ENST00000335725 BHLHA9Q7RTU4 235 aa7.49□□□□□ -1.21
TDP1-201ENST00000335725 OR2K2Q8NGT1 345 aa7.49□□□□□ -1.21
TDP1-201ENST00000335725 DIO2Q92813 273 aa7.49□□□□□ -1.21
TDP1-201ENST00000335725 FAM103A1Q9BTL3 118 aaKnown RBP7.49□□□□□ -1.21
TDP1-201ENST00000335725 QTRT1Q9BXR0 403 aaKnown RBP7.49□□□□□ -1.21
TDP1-201ENST00000335725 TMEM30AQ9NV96 361 aa7.49□□□□□ -1.21
TDP1-201ENST00000335725 RALYQ9UKM9 306 aaKnown RBP7.49□□□□□ -1.21
TDP1-201ENST00000335725 C7orf71A4D174 169 aa7.49□□□□□ -1.21
TDP1-201ENST00000335725 ERI3O43414 337 aaKnown RBP7.49□□□□□ -1.21
TDP1-201ENST00000335725 DUSP11O75319 330 aaKnown RBP7.49□□□□□ -1.21
TDP1-201ENST00000335725 SFTPDP35247 375 aa7.49□□□□□ -1.21
TDP1-201ENST00000335725 MFGE8Q08431 387 aaPredicted RBP7.49□□□□□ -1.21
TDP1-201ENST00000335725 DMWDQ09019 674 aa7.49□□□□□ -1.21
TDP1-201ENST00000335725 CLEC12BQ2HXU8 276 aa7.49□□□□□ -1.21
TDP1-201ENST00000335725 FAM78BQ5VT40 261 aa7.49□□□□□ -1.21
TDP1-201ENST00000335725 OR5H2Q8NGV7 314 aa7.49□□□□□ -1.21
TDP1-201ENST00000335725 IGSF8Q969P0 613 aa7.49□□□□□ -1.21
TDP1-201ENST00000335725 TRBV5-7A0A0A0MS05 114 aa7.49□□□□□ -1.21
TDP1-201ENST00000335725 MUC21A0A0G2JKD1 596 aa7.49□□□□□ -1.21
TDP1-201ENST00000335725 MUC21A0A140T8X8 626 aa7.49□□□□□ -1.21
TDP1-201ENST00000335725 A0A1B0GUS0 222 aa7.49□□□□□ -1.21
TDP1-201ENST00000335725 SLC22A20A6NK97 555 aa7.49□□□□□ -1.21
TDP1-201ENST00000335725 HMGN4O00479 90 aa7.49□□□□□ -1.21
TDP1-201ENST00000335725 HS3ST1O14792 307 aa7.49□□□□□ -1.21
TDP1-201ENST00000335725 ADH4P08319 380 aa7.49□□□□□ -1.21
TDP1-201ENST00000335725 ADMP35318 185 aa7.49□□□□□ -1.21
TDP1-201ENST00000335725 WASP42768 502 aa7.49□□□□□ -1.21
TDP1-201ENST00000335725 GGTLC2Q14390 218 aa7.49□□□□□ -1.21
TDP1-201ENST00000335725 ELAVL3Q14576 367 aaKnown RBP7.49□□□□□ -1.21
TDP1-201ENST00000335725 MUC21Q5SSG8 566 aa7.49□□□□□ -1.21
TDP1-201ENST00000335725 LCN15Q6UWW0 184 aa7.49□□□□□ -1.21
TDP1-201ENST00000335725 ADGRE4PQ86SQ3 457 aa7.49□□□□□ -1.21
TDP1-201ENST00000335725 C5orf66Q9H5L9 145 aa7.49□□□□□ -1.21
TDP1-201ENST00000335725 PLXNA3P51805 1871 aa7.48□□□□□ -1.21
TDP1-201ENST00000335725 ZFP92A6NM28 416 aa7.48□□□□□ -1.21
TDP1-201ENST00000335725 SMIM10L1P0DMW3 83 aa7.48□□□□□ -1.21
TDP1-201ENST00000335725 BSGP35613 385 aa7.48□□□□□ -1.21
TDP1-201ENST00000335725 RPL23P62829 140 aaKnown RBP7.48□□□□□ -1.21
TDP1-201ENST00000335725 ASPHD2Q6ICH7 369 aa7.48□□□□□ -1.21
TDP1-201ENST00000335725 UEVLDQ8IX04 471 aa7.48□□□□□ -1.21
TDP1-201ENST00000335725 UMODL1-AS1Q8N2C9 162 aa7.48□□□□□ -1.21
TDP1-201ENST00000335725 TMEM230Q96A57 120 aa7.48□□□□□ -1.21
TDP1-201ENST00000335725 SMIM10Q96HG1 83 aa7.48□□□□□ -1.21
TDP1-201ENST00000335725 LMF2Q9BU23 707 aaKnown RBP7.48□□□□□ -1.21
TDP1-201ENST00000335725 KLHDC2Q9Y2U9 406 aa7.48□□□□□ -1.21
TDP1-201ENST00000335725 ZNF732B4DXR9 585 aa7.48□□□□□ -1.21
TDP1-201ENST00000335725 VENTXO95231 258 aa7.48□□□□□ -1.21
TDP1-201ENST00000335725 OLIG3Q7RTU3 272 aa7.48□□□□□ -1.21
TDP1-201ENST00000335725 RCL1Q9Y2P8 373 aaKnown RBP7.48□□□□□ -1.21
TDP1-201ENST00000335725 GRIFINA4D1Z8 144 aa7.48□□□□□ -1.21
TDP1-201ENST00000335725 FOXL1Q12952 345 aa7.48□□□□□ -1.21
TDP1-201ENST00000335725 SQSTM1Q13501 440 aa7.48□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 68.3 ms