RNA–Protein interactions for RNA: ENST00000330045.11

BRCC3-201, Transcript of BRCA1/BRCA2-containing complex subunit 3, humanhuman

TSL 1 (best) BASIC

Gene BRCC3, Length 2,496 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCC3-201ENST00000330045 BCL3P20749 454 aa13.2□□□□□ -0.3
BRCC3-201ENST00000330045 PPP1CCP36873 323 aaKnown RBP13.2□□□□□ -0.3
BRCC3-201ENST00000330045 POLR2GP62487 172 aaKnown RBP eCLIP13.2□□□□□ -0.3
BRCC3-201ENST00000330045 CTAG1AP78358 180 aa13.2□□□□□ -0.3
BRCC3-201ENST00000330045 ZNF266Q14584 549 aa13.2□□□□□ -0.3
BRCC3-201ENST00000330045 CLINT1Q14677 625 aa13.2□□□□□ -0.3
BRCC3-201ENST00000330045 ACER2Q5QJU3 275 aa13.2□□□□□ -0.3
BRCC3-201ENST00000330045 Q6ZS49 121 aa13.2□□□□□ -0.3
BRCC3-201ENST00000330045 COLCA1Q6ZS62 124 aa13.2□□□□□ -0.3
BRCC3-201ENST00000330045 ZNF561Q8N587 486 aa13.2□□□□□ -0.3
BRCC3-201ENST00000330045 SUMF1Q8NBK3 374 aa13.2□□□□□ -0.3
BRCC3-201ENST00000330045 TMEM56Q96MV1 263 aa13.2□□□□□ -0.3
BRCC3-201ENST00000330045 PAPOLGQ9BWT3 736 aaKnown RBP13.2□□□□□ -0.3
BRCC3-201ENST00000330045 TMEM56-RWDD3S4R434 201 aa13.2□□□□□ -0.3
BRCC3-201ENST00000330045 A0A1B0GV50 99 aa13.2□□□□□ -0.3
BRCC3-201ENST00000330045 TK1P04183 234 aa13.2□□□□□ -0.3
BRCC3-201ENST00000330045 DAOP14920 347 aa13.2□□□□□ -0.3
BRCC3-201ENST00000330045 KRBOX4Q5JUW0 171 aa13.2□□□□□ -0.3
BRCC3-201ENST00000330045 C5orf24Q7Z6I8 188 aa13.2□□□□□ -0.3
BRCC3-201ENST00000330045 ZNF565Q8N9K5 539 aa13.2□□□□□ -0.3
BRCC3-201ENST00000330045 OR56B2PQ8NGI1 322 aa13.2□□□□□ -0.3
BRCC3-201ENST00000330045 SLAMF9Q96A28 289 aa13.2□□□□□ -0.3
BRCC3-201ENST00000330045 SPIN2AQ99865 258 aa13.2□□□□□ -0.3
BRCC3-201ENST00000330045 SPIN2BQ9BPZ2 258 aa13.2□□□□□ -0.3
BRCC3-201ENST00000330045 Q9N2K0 584 aa13.2□□□□□ -0.3
BRCC3-201ENST00000330045 RYDENQ9NUL5 291 aaKnown RBP13.2□□□□□ -0.3
BRCC3-201ENST00000330045 MRPS18CQ9Y3D5 142 aaKnown RBP13.2□□□□□ -0.3
BRCC3-201ENST00000330045 IGSF23A1L1A6 192 aa13.19□□□□□ -0.3
BRCC3-201ENST00000330045 S100A6P06703 90 aa13.19□□□□□ -0.3
BRCC3-201ENST00000330045 CCNOP22674 350 aa13.19□□□□□ -0.3
BRCC3-201ENST00000330045 EIF2S3LQ2VIR3 472 aaKnown RBP13.19□□□□□ -0.3
BRCC3-201ENST00000330045 SELENOHQ8IZQ5 122 aaKnown RBP13.19□□□□□ -0.3
BRCC3-201ENST00000330045 OR2G3Q8NGZ4 309 aa13.19□□□□□ -0.3
BRCC3-201ENST00000330045 CD300LFQ8TDQ1 290 aa13.19□□□□□ -0.3
BRCC3-201ENST00000330045 TAAR9Q96RI9 348 aa13.19□□□□□ -0.3
BRCC3-201ENST00000330045 IFT22Q9H7X7 185 aa13.19□□□□□ -0.3
BRCC3-201ENST00000330045 PLEKHF2Q9H8W4 249 aa13.19□□□□□ -0.3
BRCC3-201ENST00000330045 NOSIPQ9Y314 301 aaKnown RBP13.19□□□□□ -0.3
BRCC3-201ENST00000330045 OTOGLQ3ZCN5 2332 aa13.19□□□□□ -0.3
BRCC3-201ENST00000330045 C5orf52A6NGY3 159 aa13.19□□□□□ -0.3
BRCC3-201ENST00000330045 MRPL33O75394 65 aaKnown RBP13.19□□□□□ -0.3
BRCC3-201ENST00000330045 SCTP09683 121 aa13.19□□□□□ -0.3
BRCC3-201ENST00000330045 OR13C7P0DN81 318 aa13.19□□□□□ -0.3
BRCC3-201ENST00000330045 HAAOP46952 286 aa13.19□□□□□ -0.3
BRCC3-201ENST00000330045 GFRA1P56159 465 aa13.19□□□□□ -0.3
BRCC3-201ENST00000330045 RND3P61587 244 aa13.19□□□□□ -0.3
BRCC3-201ENST00000330045 TGIF1Q15583 401 aa13.19□□□□□ -0.3
BRCC3-201ENST00000330045 SRSF7Q16629 238 aaKnown RBP eCLIP13.19□□□□□ -0.3
BRCC3-201ENST00000330045 NRN1LQ496H8 165 aa13.19□□□□□ -0.3
BRCC3-201ENST00000330045 ZNF818PQ6ZRF7 136 aa13.19□□□□□ -0.3
BRCC3-201ENST00000330045 TIPARPQ7Z3E1 657 aaKnown RBP13.19□□□□□ -0.3
BRCC3-201ENST00000330045 OR1J1Q8NGS3 322 aa13.19□□□□□ -0.3
BRCC3-201ENST00000330045 SNIP1Q8TAD8 396 aaKnown RBP13.19□□□□□ -0.3
BRCC3-201ENST00000330045 TMEM45BQ96B21 275 aa13.19□□□□□ -0.3
BRCC3-201ENST00000330045 REPIN1Q9BWE0 567 aaKnown RBP13.19□□□□□ -0.3
BRCC3-201ENST00000330045 TCFL5Q9UL49 500 aa13.19□□□□□ -0.3
BRCC3-201ENST00000330045 LOXL2Q9Y4K0 774 aa13.19□□□□□ -0.3
BRCC3-201ENST00000330045 LAMA5O15230 3695 aa13.18□□□□□ -0.3
BRCC3-201ENST00000330045 A0A1B0GW64 132 aa13.18□□□□□ -0.3
BRCC3-201ENST00000330045 A0A1W2PPH5 198 aa13.18□□□□□ -0.3
BRCC3-201ENST00000330045 PINLYPA6NC86 204 aa13.18□□□□□ -0.3
BRCC3-201ENST00000330045 A6NLC8 198 aa13.18□□□□□ -0.3
BRCC3-201ENST00000330045 SSSCA1O60232 199 aa13.18□□□□□ -0.3
BRCC3-201ENST00000330045 PITX3O75364 302 aa13.18□□□□□ -0.3
BRCC3-201ENST00000330045 AGAP20933 346 aa13.18□□□□□ -0.3
BRCC3-201ENST00000330045 OMGP23515 440 aa13.18□□□□□ -0.3
BRCC3-201ENST00000330045 ATP6V0CP27449 155 aa13.18□□□□□ -0.3
BRCC3-201ENST00000330045 CYB561P49447 251 aa13.18□□□□□ -0.3
BRCC3-201ENST00000330045 FGF12P61328 243 aa13.18□□□□□ -0.3
BRCC3-201ENST00000330045 PRDX4Q13162 271 aa13.18□□□□□ -0.3
BRCC3-201ENST00000330045 RHEBQ15382 184 aa13.18□□□□□ -0.3
BRCC3-201ENST00000330045 GAPTQ8N292 157 aa13.18□□□□□ -0.3
BRCC3-201ENST00000330045 SLC25A31Q9H0C2 315 aa13.18□□□□□ -0.3
BRCC3-201ENST00000330045 LYRM2Q9NU23 88 aaPredicted RBP13.18□□□□□ -0.3
BRCC3-201ENST00000330045 ATPIF1Q9UII2 106 aa13.18□□□□□ -0.3
BRCC3-201ENST00000330045 RFNGQ9Y644 331 aa13.18□□□□□ -0.3
BRCC3-201ENST00000330045 ADAM20O43506 726 aa13.18□□□□□ -0.3
BRCC3-201ENST00000330045 NAPSAO96009 420 aa13.18□□□□□ -0.3
BRCC3-201ENST00000330045 F10P00742 488 aa13.18□□□□□ -0.3
BRCC3-201ENST00000330045 ACAA1P09110 424 aaPredicted RBP13.18□□□□□ -0.3
BRCC3-201ENST00000330045 SULT1A1P50225 295 aa13.18□□□□□ -0.3
BRCC3-201ENST00000330045 GPM6AP51674 278 aa13.18□□□□□ -0.3
BRCC3-201ENST00000330045 VAMP2P63027 116 aa13.18□□□□□ -0.3
BRCC3-201ENST00000330045 ARF1P84077 181 aaKnown RBP13.18□□□□□ -0.3
BRCC3-201ENST00000330045 CXorf66Q5JRM2 361 aaPredicted RBP13.18□□□□□ -0.3
BRCC3-201ENST00000330045 TMEM252Q8N6L7 170 aa13.18□□□□□ -0.3
BRCC3-201ENST00000330045 HS3ST6Q96QI5 342 aa13.18□□□□□ -0.3
BRCC3-201ENST00000330045 FGF23Q9GZV9 251 aaPredicted RBP13.18□□□□□ -0.3
BRCC3-201ENST00000330045 MAGT1Q9H0U3 335 aa13.18□□□□□ -0.3
BRCC3-201ENST00000330045 ZNF318Q5VUA4 2279 aa13.18□□□□□ -0.3
BRCC3-201ENST00000330045 ZNF724A8MTY0 619 aa13.17□□□□□ -0.3
BRCC3-201ENST00000330045 GPR37O15354 613 aa13.17□□□□□ -0.3
BRCC3-201ENST00000330045 ZNF883P0CG24 379 aa13.17□□□□□ -0.3
BRCC3-201ENST00000330045 S100A12P80511 92 aa13.17□□□□□ -0.3
BRCC3-201ENST00000330045 FOXO1Q12778 655 aa13.17□□□□□ -0.3
BRCC3-201ENST00000330045 C9orf135Q5VTT2 229 aa13.17□□□□□ -0.3
BRCC3-201ENST00000330045 SAXO1Q8IYX7 474 aa13.17□□□□□ -0.3
BRCC3-201ENST00000330045 GPHA2Q96T91 129 aa13.17□□□□□ -0.3
BRCC3-201ENST00000330045 RARRES2Q99969 163 aa13.17□□□□□ -0.3
BRCC3-201ENST00000330045 A0A096LPE4 126 aa13.17□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms