RNA–Protein interactions for RNA: ENST00000323668.11

TCOF1-201, Transcript of treacle ribosome biogenesis factor 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TCOF1, Length 4,832 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-201ENST00000323668 ID4P47928 161 aa12.85□□□□□ -0.35
TCOF1-201ENST00000323668 TMEM50BP56557 158 aa12.85□□□□□ -0.35
TCOF1-201ENST00000323668 SLC38A11Q08AI6 406 aa12.85□□□□□ -0.35
TCOF1-201ENST00000323668 ZNF816Q0VGE8 651 aaPredicted RBP12.85□□□□□ -0.35
TCOF1-201ENST00000323668 TMEM241Q24JQ0 296 aa12.85□□□□□ -0.35
TCOF1-201ENST00000323668 VASH2Q86V25 355 aa12.85□□□□□ -0.35
TCOF1-201ENST00000323668 TMEM18Q96B42 140 aa12.85□□□□□ -0.35
TCOF1-201ENST00000323668 REG4Q9BYZ8 158 aa12.85□□□□□ -0.35
TCOF1-201ENST00000323668 CEACAM6P40199 344 aa12.85□□□□□ -0.35
TCOF1-201ENST00000323668 APCDD1LQ8NCL9 501 aa12.85□□□□□ -0.35
TCOF1-201ENST00000323668 SLX1AQ9BQ83 275 aa12.85□□□□□ -0.35
TCOF1-201ENST00000323668 HSF4Q9ULV5 492 aa12.85□□□□□ -0.35
TCOF1-201ENST00000323668 CCL4P13236 92 aa12.84□□□□□ -0.35
TCOF1-201ENST00000323668 RBM11P57052 281 aaKnown RBP12.84□□□□□ -0.35
TCOF1-201ENST00000323668 MPV17LQ2QL34 196 aa12.84□□□□□ -0.35
TCOF1-201ENST00000323668 KIAA1456Q9P272 454 aa12.84□□□□□ -0.35
TCOF1-201ENST00000323668 CYTIPO60759 359 aa12.84□□□□□ -0.35
TCOF1-201ENST00000323668 TNFSF4P23510 183 aa12.84□□□□□ -0.35
TCOF1-201ENST00000323668 FHL1Q13642 323 aa12.84□□□□□ -0.35
TCOF1-201ENST00000323668 ZNF66Q6ZN08 573 aa12.84□□□□□ -0.35
TCOF1-201ENST00000323668 TMEM252Q8N6L7 170 aa12.84□□□□□ -0.35
TCOF1-201ENST00000323668 SOX7Q9BT81 388 aa12.84□□□□□ -0.35
TCOF1-201ENST00000323668 TWSG1Q9GZX9 223 aa12.84□□□□□ -0.35
TCOF1-201ENST00000323668 WDR54Q9H977 334 aa12.84□□□□□ -0.35
TCOF1-201ENST00000323668 GPR35Q9HC97 309 aa12.84□□□□□ -0.35
TCOF1-201ENST00000323668 OSGIN2Q9Y236 505 aa12.84□□□□□ -0.35
TCOF1-201ENST00000323668 GPR12P47775 334 aa12.84□□□□□ -0.35
TCOF1-201ENST00000323668 VHLLQ6RSH7 139 aa12.84□□□□□ -0.35
TCOF1-201ENST00000323668 Q96M66 194 aa12.84□□□□□ -0.35
TCOF1-201ENST00000323668 CACFD1Q9UGQ2 172 aa12.84□□□□□ -0.35
TCOF1-201ENST00000323668 LOC390937A0A1W2PQ73 354 aa12.83□□□□□ -0.35
TCOF1-201ENST00000323668 ARGFXA6NJG6 315 aa12.83□□□□□ -0.35
TCOF1-201ENST00000323668 RPL36A-HNRNPH2H7BZ11 118 aa12.83□□□□□ -0.35
TCOF1-201ENST00000323668 C1QL2Q7Z5L3 287 aa12.83□□□□□ -0.35
TCOF1-201ENST00000323668 GCNT2Q8N0V5 402 aa12.83□□□□□ -0.35
TCOF1-201ENST00000323668 OR10AD1Q8NGE0 317 aa12.83□□□□□ -0.35
TCOF1-201ENST00000323668 C22orf15Q8WYQ4 148 aa12.83□□□□□ -0.35
TCOF1-201ENST00000323668 MUCL1Q96DR8 90 aa12.83□□□□□ -0.35
TCOF1-201ENST00000323668 FBXO17Q96EF6 278 aa12.83□□□□□ -0.35
TCOF1-201ENST00000323668 TAAR3PQ9P1P4 343 aa12.83□□□□□ -0.35
TCOF1-201ENST00000323668 MPC1Q9Y5U8 109 aa12.83□□□□□ -0.35
TCOF1-201ENST00000323668 BCL3P20749 454 aa12.83□□□□□ -0.36
TCOF1-201ENST00000323668 FGF8P55075 233 aaPredicted RBP12.83□□□□□ -0.36
TCOF1-201ENST00000323668 TUBG2Q9NRH3 451 aa12.83□□□□□ -0.36
TCOF1-201ENST00000323668 NGFP01138 241 aa12.83□□□□□ -0.36
TCOF1-201ENST00000323668 ABHD3Q8WU67 409 aa12.83□□□□□ -0.36
TCOF1-201ENST00000323668 CTNNBIP1Q9NSA3 81 aaPredicted RBP12.83□□□□□ -0.36
TCOF1-201ENST00000323668 FBLN5Q9UBX5 448 aa12.83□□□□□ -0.36
TCOF1-201ENST00000323668 GOLGB1Q14789 3259 aaKnown RBP12.83□□□□□ -0.36
TCOF1-201ENST00000323668 ZNF737O75373 536 aa12.83□□□□□ -0.36
TCOF1-201ENST00000323668 RNF126Q9BV68 326 aa12.83□□□□□ -0.36
TCOF1-201ENST00000323668 SIRT7Q9NRC8 400 aa12.83□□□□□ -0.36
TCOF1-201ENST00000323668 TMEM30CPA0ZSE6 113 aa12.82□□□□□ -0.36
TCOF1-201ENST00000323668 B4DEV8 164 aa12.82□□□□□ -0.36
TCOF1-201ENST00000323668 OPN1MWP04001 364 aa12.82□□□□□ -0.36
TCOF1-201ENST00000323668 OPN1MW2P0DN77 364 aa12.82□□□□□ -0.36
TCOF1-201ENST00000323668 OPN1MW3P0DN78 364 aa12.82□□□□□ -0.36
TCOF1-201ENST00000323668 ZNF17P17021 662 aa12.82□□□□□ -0.36
TCOF1-201ENST00000323668 PSG4Q00888 419 aa12.82□□□□□ -0.36
TCOF1-201ENST00000323668 EIF3IQ13347 325 aaKnown RBP12.82□□□□□ -0.36
TCOF1-201ENST00000323668 PAQR4Q8N4S7 273 aaPredicted RBP12.82□□□□□ -0.36
TCOF1-201ENST00000323668 TMEM37Q8WXS4 190 aa12.82□□□□□ -0.36
TCOF1-201ENST00000323668 ZPBPQ9BS86 351 aa12.82□□□□□ -0.36
TCOF1-201ENST00000323668 TIMM8BQ9Y5J9 83 aaPredicted RBP12.82□□□□□ -0.36
TCOF1-201ENST00000323668 PLAURQ03405 335 aa12.82□□□□□ -0.36
TCOF1-201ENST00000323668 IGSF11Q5DX21 431 aa12.82□□□□□ -0.36
TCOF1-201ENST00000323668 IP6K3Q96PC2 410 aa12.82□□□□□ -0.36
TCOF1-201ENST00000323668 FSCN3Q9NQT6 498 aa12.82□□□□□ -0.36
TCOF1-201ENST00000323668 SLC22A20A6NK97 555 aa12.82□□□□□ -0.36
TCOF1-201ENST00000323668 ZNF92Q03936 586 aa12.82□□□□□ -0.36
TCOF1-201ENST00000323668 OR1C1Q15619 314 aa12.82□□□□□ -0.36
TCOF1-201ENST00000323668 SNAI3Q3KNW1 292 aa12.82□□□□□ -0.36
TCOF1-201ENST00000323668 EDARADDQ8WWZ3 215 aa12.82□□□□□ -0.36
TCOF1-201ENST00000323668 MOB3AQ96BX8 217 aa12.82□□□□□ -0.36
TCOF1-201ENST00000323668 RTBDNQ9BSG5 229 aaPredicted RBP12.82□□□□□ -0.36
TCOF1-201ENST00000323668 DUSP15Q9H1R2 295 aaPredicted RBP12.82□□□□□ -0.36
TCOF1-201ENST00000323668 AUP1Q9Y679 476 aa12.82□□□□□ -0.36
TCOF1-201ENST00000323668 DUXBA0A1W2PPF3 345 aa12.82□□□□□ -0.36
TCOF1-201ENST00000323668 PITX3O75364 302 aa12.82□□□□□ -0.36
TCOF1-201ENST00000323668 DANCRP0C864 163 aa12.82□□□□□ -0.36
TCOF1-201ENST00000323668 RNPS1Q15287 305 aaKnown RBP12.82□□□□□ -0.36
TCOF1-201ENST00000323668 SVILO95425 2214 aa12.81□□□□□ -0.36
TCOF1-201ENST00000323668 ZNF320A2RRD8 509 aa12.81□□□□□ -0.36
TCOF1-201ENST00000323668 RAMP1O60894 148 aa12.81□□□□□ -0.36
TCOF1-201ENST00000323668 CELA2AP08217 269 aa12.81□□□□□ -0.36
TCOF1-201ENST00000323668 SSPNQ14714 243 aa12.81□□□□□ -0.36
TCOF1-201ENST00000323668 FAM166AQ6J272 317 aa12.81□□□□□ -0.36
TCOF1-201ENST00000323668 ZNF705AQ6ZN79 300 aaPredicted RBP12.81□□□□□ -0.36
TCOF1-201ENST00000323668 TAAR6Q96RI8 345 aa12.81□□□□□ -0.36
TCOF1-201ENST00000323668 ANGPTL4Q9BY76 406 aa12.81□□□□□ -0.36
TCOF1-201ENST00000323668 TMEM222Q9H0R3 208 aa12.81□□□□□ -0.36
TCOF1-201ENST00000323668 PLA2G3Q9NZ20 509 aa12.81□□□□□ -0.36
TCOF1-201ENST00000323668 CYC1P08574 325 aa12.81□□□□□ -0.36
TCOF1-201ENST00000323668 MDH2P40926 338 aaKnown RBP12.81□□□□□ -0.36
TCOF1-201ENST00000323668 KHDC3LQ587J8 217 aa12.81□□□□□ -0.36
TCOF1-201ENST00000323668 OR2W1Q9Y3N9 320 aa12.81□□□□□ -0.36
TCOF1-201ENST00000323668 HEXAP06865 529 aa12.81□□□□□ -0.36
TCOF1-201ENST00000323668 SLC25A6P12236 298 aa12.81□□□□□ -0.36
TCOF1-201ENST00000323668 MPZP25189 248 aa12.81□□□□□ -0.36
TCOF1-201ENST00000323668 FABP6P51161 128 aa12.81□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 52.8 ms